DY262778

Overview
NameDY262778
Unique NameDY262778
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1163
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262778 vs. ExPASy Swiss-Prot
Match: FH16_ARATH (Formin-like protein 16 OS=Arabidopsis thaliana GN=FH16 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 2.637e-33
Identity = 80/180 (44.44%), Postives = 109/180 (60.56%), Query Frame = 1
Query:  475 KKASLKPLHWVKVTRAMQGSLWADSQKQENHSR-APEIDISELESLFSAASDGSGTNKAGVRRGSNISKPDKVQLVELRRAYNCEIMLTKIKIPLPDMMNXXXXXXXXXXXIDQVENLIKFCPTKEEMELLKNYASDKVMLVKCELFFLEVMKGPPGRSKLPVFALKFSSPCKLMILKRI 1011
            K++SLKPLHWVK+TRA+QGSLW + Q Q   S+ A E+D+ E+E+LFS  +           +     KP+KV L++L+RA N  + L  +K+PLPDMM            +DQ+ENLI+ CPTKEEMELLKNY  DK  L K E   LE+MK P   +KL V + K     K+   +++
Sbjct:  188 KRSSLKPLHWVKITRALQGSLWDELQIQYGESQTAIELDVPEIETLFSVGA-----------KPRPKPKPEKVPLIDLKRANNTIVNLKILKMPLPDMMAAVMAMDESVLDVDQIENLIQLCPTKEEMELLKNYTGDKATLGKSEQCLLELMKVPRFEAKLRVLSFKIPFGTKITKFRKM 356          
BLAST of DY262778 vs. ExPASy Swiss-Prot
Match: FH15A_ARATH (Formin-like protein 15a OS=Arabidopsis thaliana GN=FH15A PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 1.108e-31
Identity = 80/180 (44.44%), Postives = 104/180 (57.78%), Query Frame = 1
Query:  469 APKKASLKPLHWVKVTRAMQGSLWADSQKQENHSR-APEIDISELESLFSAASDGSGTNKAGVRRGSNISKPDKVQLVELRRAYNCEIMLTKIKIPLPDMMNXXXXXXXXXXXIDQVENLIKFCPTKEEMELLKNYASDKVMLVKCELFFLEVMKGPPGRSKLPVFALKFSSPCKLMILK 1005
            A K+ASLKPLHWVK+T  +QGSLW + Q++   S+ A E+DISELE+LF   +                 KP+K++L +LRRA      +  + +PLPDMM            +DQ+E LIKFCPT EEMELLK Y  DK  L K E + LE+MK P   +KL VF+ K     K+  LK
Sbjct:   56 AKKRASLKPLHWVKITSDLQGSLWDELQRRHGDSQTAIELDISELETLFFVEA-----------------KPEKIRLHDLRRASYRVFNVINLSMPLPDMMTAVLAMDESVVDVDQIEKLIKFCPTNEEMELLKTYTGDKAALGKYEQYLLELMKVPRLEAKLRVFSFKTQFGTKITELK 218          
BLAST of DY262778 vs. ExPASy Swiss-Prot
Match: FH21B_ARATH (Formin-like protein 21b OS=Arabidopsis thaliana GN=FH21B PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.845e-24
Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  694 LVELRRAYNCEIMLTKIKIPLPDMMNXXXXXXXXXXXIDQVENLIKFCPTKEEMELLKNYASDKVMLVKCELFFLEVMKGPPGRSKLPVFALK 972
            L++ RRA+N  IML K+++PLPDMM            +DQ+ENLI+FCPTKEEM+LLKNY  DK  L KCE +FLE+MK P   SKL VF+ K
Sbjct:   59 LIDQRRAFNTMIMLQKVEMPLPDMMAAVLGMDESVLDVDQIENLIRFCPTKEEMKLLKNYTGDKATLGKCEQYFLELMKVPGVESKLRVFSFK 151          

HSP 2 Score: 27.335 bits (59), Expect = 2.845e-24
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 3
Query:  966 FKIFFSMQVDDLETNLNTINGA 1031
            FKI F  Q+ +L   LNT+N A
Sbjct:  150 FKIHFGTQIKELNKGLNTVNSA 171          
BLAST of DY262778 vs. ExPASy Swiss-Prot
Match: FH15B_ARATH (Putative formin-like protein 15b OS=Arabidopsis thaliana GN=FH15B PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 3.231e-23
Identity = 55/103 (53.40%), Postives = 69/103 (66.99%), Query Frame = 1
Query:  664 SNISKPDKVQLVELRRAYNCEIMLTKIKIPLPDMMNXXXXXXXXXXXIDQVENLIKFCPTKEEMELLKNYASDKVMLVKCELFFLEVMKGPPGRSKLPVFALK 972
            +++ K   ++ ++LRRA + EIMLTK+ IPL DMM            +DQ+ENLI+FCPTKEEMELLKNY  DK  L KCE +FLEVMK P   SKL  F+ K
Sbjct:   21 ADLEKKKAMKQIDLRRANDTEIMLTKVNIPLADMMAAVLGMDEYVLDVDQIENLIRFCPTKEEMELLKNYTGDKATLGKCEQYFLEVMKVPGVESKLRAFSFK 123          
BLAST of DY262778 vs. ExPASy Swiss-Prot
Match: FH19_ARATH (Formin-like protein 19 OS=Arabidopsis thaliana GN=FH19 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 4.666e-22
Identity = 71/180 (39.44%), Postives = 95/180 (52.78%), Query Frame = 1
Query:  463 SHAPK-KASLKPLHWVKVTRAMQGSLWADSQKQ--------ENHSRAPEIDISELESLFSAASDGSGTNKAGVRRGSNISKPDKVQLVELRRAYNCEIMLTKIKIPLPDMMNXXXXXXXXXXX-IDQVENLIKFCPTKEEMELLKNYASDKVMLVKCELFFLEVMKGPPGRSKLPVFALK 972
            S  PK K SLKPLHWVK TRA+ GSLW + Q++        E    A E+ +SE+E++FS  +           +     +P+KV L++LRRA N EI L  + I LPDM+              DQ+ENLI   PTKE+M+ L  Y  DK    +   +  EV+K P   SKL VF+ K
Sbjct:   69 SRPPKTKCSLKPLHWVKKTRALPGSLWDELQRRQECRDIEDEQILCAIELSVSEIETIFSLGA-----------KPKPKPEPEKVPLIDLRRATNTEIRLMLLNIRLPDMIAAAMAMDESRLDDFDQIENLINLFPTKEDMKFLLTYTGDKGNCEQLFQYLQEVVKVPRVESKLRVFSFK 237          
BLAST of DY262778 vs. ExPASy Swiss-Prot
Match: FH21A_ARATH (Putative formin-like protein 21a OS=Arabidopsis thaliana GN=FH21A PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.449e-20
Identity = 69/188 (36.70%), Postives = 93/188 (49.47%), Query Frame = 1
Query:  475 KKASLKPLHWVKVTRAMQGSLWADSQKQ---------ENHSRAPEIDISELESLFSAASDGSGTNKAGVRRGSNISKPDKVQLVELRRAYNCEIMLTKIKIPLP-DMMNXXXXXXXXXXXIDQVENLIKFCPTKEEMELLKNYASDKVMLVKCELFFLEVMKGPPGRSKLPVFALKFSSPCKLMILKR 1008
            KK+SLK  +WVK+TRA+ GSLW + Q Q         E    A E+D+SE+E+ FS  +                +KP+K  L++LRRA + E+ L  + I LP DMM             D++  LI   PTKE MELL +Y   K  L K E +F E+ K     SKL VF  K     K+   K+
Sbjct:  130 KKSSLKRFNWVKITRALPGSLWDELQIQQVCHGDIEDEQILCAIELDVSEIETFFSLGA----------------AKPEKDPLIDLRRATDTELTLMLLNIRLPADMMAAIMAMDESVLDDDEIRGLINLFPTKENMELLMSYTGGKWTLEKWEQYFQELRKVLRVESKLRVFYFKIQFSTKITQFKK 301          
BLAST of DY262778 vs. ExPASy Swiss-Prot
Match: FH12_ARATH (Formin-like protein 12 OS=Arabidopsis thaliana GN=FH12 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.826e-16
Identity = 50/99 (50.51%), Postives = 61/99 (61.62%), Query Frame = 1
Query:  712 AYNCEIMLTKIKIPLPDMMNXXXXXXXXXXXIDQVENLIKFCPTKEEMELLKNYA-SDKVMLVKCELFFLEVMKGPPGRSKLPVFALKFSSPCKLMILK 1005
            A NCE ML+KIKIPLPDM+N           IDQ++NLIK C +KEEM+ L+N A  DK +L KCE  F E+M  P    KL VFA K   P ++  LK
Sbjct:    2 ASNCEKMLSKIKIPLPDMLNAVLDLDSSAVIIDQIKNLIKICWSKEEMDRLRNSAGGDKEVLGKCEEIFGELMMVPRIEPKLRVFAFKVEYPSRVSDLK 100          
BLAST of DY262778 vs. ExPASy Swiss-Prot
Match: FH13_ORYSJ (Formin-like protein 13 OS=Oryza sativa subsp. japonica GN=FH13 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.820e-13
Identity = 55/174 (31.61%), Postives = 83/174 (47.70%), Query Frame = 1
Query:  424 PANHGRGRLNSGVSHAPKKASLKPLHWVKVTRAMQG--SLWADSQKQENHSRAPEIDISELESLF-SAASDGSGTNKAGVRRGSNISKPDKVQLVELRRAYNCEIMLTKIKIPLPDMMNXXXXXXXXXXXIDQVENLIKFCPTKEEMELLKNYASDKVMLVKCELFFLEVMKGP 936
            PA   RG  NSG +  PK   LKPLHW K+ RA+ G  ++W     Q  +S    +D   +ESLF ++   G+G++    RRG   S   + +L++ +R  N  IML  + +   +++             +  E L K  PTKEE   LK Y+ D   +   E F  +V+  P
Sbjct:  315 PAVEDRGGENSGAARPPKPPHLKPLHWDKL-RAISGRTTVW----DQVKNSDTFRVDEEAMESLFLNSGGGGAGSSDPAARRGG--SGKQERRLLDPKRLQNVAIMLKSLNVAADEVIGALVRGNPEDLGSEFYETLAKMAPTKEEELKLKGYSGDLSKIDPAERFLKDVLGVP 481          
BLAST of DY262778 vs. ExPASy Swiss-Prot
Match: FORH_DICDI (Formin-H OS=Dictyostelium discoideum GN=forH PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 5.717e-12
Identity = 53/179 (29.61%), Postives = 83/179 (46.37%), Query Frame = 1
Query:  457 GVSHAPKKASLKP------LHWVKVTRA-MQGSLWADSQKQENHSRAPEIDISELESLFSAASDGSGTNKAGVRRGSNISKPDKVQLVELRRAYNCEIMLTKIKIPLPDMMNXXXXXXXXXXXIDQVENLIKFCPTKEEMELLKNYASDKVMLVKCELFFLEVMKGPPGRSKLPVFALK 972
            G S+ P K  +KP       +W+ +    +QG+ W    K +  S    +D  ELESLFSA +    T K        +++   V ++++++A NC IML   KIP   +              +    L++F PTKE++E +K Y  D++ L   E + L VM  P   S+L  F  K
Sbjct:  617 GKSNKPAKPIIKPSVKMRNFNWITIPALKVQGTFW---DKLDETSFIQSLDKVELESLFSAKAP---TVKV---ESKQLTRKVVVTVIDMKKANNCAIMLQHFKIPNEQLKKMQIMLDEKHFSQENAIYLLQFAPTKEDIEAIKEYQGDQMQLGAAEQYMLTVMDIPKLDSRLKAFIFK 786          
The following BLAST results are available for this feature:
BLAST of DY262778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
FH16_ARATH2.637e-3344.44Formin-like protein 16 OS=Arabidopsis thaliana GN=... [more]
FH15A_ARATH1.108e-3144.44Formin-like protein 15a OS=Arabidopsis thaliana GN... [more]
FH21B_ARATH2.845e-2455.91Formin-like protein 21b OS=Arabidopsis thaliana GN... [more]
FH15B_ARATH3.231e-2353.40Putative formin-like protein 15b OS=Arabidopsis th... [more]
FH19_ARATH4.666e-2239.44Formin-like protein 19 OS=Arabidopsis thaliana GN=... [more]
FH21A_ARATH7.449e-2036.70Putative formin-like protein 21a OS=Arabidopsis th... [more]
FH12_ARATH3.826e-1650.51Formin-like protein 12 OS=Arabidopsis thaliana GN=... [more]
FH13_ORYSJ8.820e-1331.61Formin-like protein 13 OS=Oryza sativa subsp. japo... [more]
FORH_DICDI5.717e-1229.61Formin-H OS=Dictyostelium discoideum GN=forH PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DG01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262778 ID=DY262778; Name=DY262778; organism=Citrus clementina; type=EST; length=1163bp
CAACCCTTTTTTCATCCACCGCCACCGCCACCGCCGCCACCACCACCATT
TCCGCCTTCCTCCTTGGGTAAGATAACTAACAAGCTACAGCCTGCACCTA
CTTCCCAACCAGCAGTACCTCCTCCTCCACCGCCACCTCCAAAATCGTCC
TCTACCTCTATACCTATGGCACCTCCTCCTCCTCCCTCTATAGGTTGTAA
GCCCATTAATGCCCCTAGGCCACCTCCGCCTCCTCCTCCTTTAGGACCTT
CACGGTCAGGTGCAGTCCCACCGCCTCCACCACCAGCACCCAAACTTCCT
ACTGCTCCTTCTCCACCTAGTCGTGGTGTAATGCCAAGCCCTCCCCCACC
ACCTGGAGTGAAGAGTTCCAGTGTGCCCCCACCACCACTCCCATCTGTTG
GAAAGGGAAAAGTGACATCAGGGCCAGCAAACCATGGTAGAGGTCGATTA
AACAGTGGAGTTAGTCATGCTCCTAAGAAAGCTTCATTGAAGCCTTTGCA
TTGGGTAAAAGTTACCCGAGCAATGCAAGGGAGTCTATGGGCTGATTCTC
AGAAACAGGAAAATCACTCAAGGGCCCCTGAAATAGATATTTCCGAACTT
GAAAGTCTGTTCTCAGCAGCTTCAGATGGAAGTGGCACTAACAAAGCTGG
AGTTCGACGTGGTTCTAATATCAGCAAACCAGACAAAGTACAATTGGTTG
AGTTGCGTAGAGCATATAATTGTGAAATAATGCTCACGAAAATAAAAATT
CCTCTGCCAGATATGATGAATGCACTTCTAGCTTTGGATTCATCAGCTCT
AGATATTGATCAAGTTGAGAATCTAATCAAGTTCTGTCCAACTAAGGAAG
AGATGGAATTGTTGAAGAACTATGCAAGCGATAAAGTTATGCTTGTAAAG
TGCGAACTGTTTTTTCTGGAAGTGATGAAAGGTCCACCGGGTAGATCCAA
GTTGCCTGTATTTGCTTTAAAATTTTCTTCTCCATGCAAGTTGATGATCT
TGAAACGAATCTAAATACCATTAATGGTGCTTCTTGAAAAGGTAAAAAAA
TCCCTGAAACTGGCGTAAAATAATGCAAACAATTTCTCACTTTGGGAAAA
AGCCTTTGAACCAAAGAAATGGACCAAAGATTCGGGGGGGGGGGTTTAAA
TTTAAAACCCCTT
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