DY262782

Overview
NameDY262782
Unique NameDY262782
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1249
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: MPKC_ASPOR (Mitogen-activated protein kinase mpkC OS=Aspergillus oryzae GN=mpkC PE=3 SV=2)

HSP 1 Score: 54.6842 bits (130), Expect = 4.711e-11
Identity = 23/74 (31.08%), Postives = 51/74 (68.92%), Query Frame = 2
Query:  590 RYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTEYNVRVASRYFKGPELLVDFK 811
            +Y+++++L+ L + HS G++HRD+KP N+++ +E   L++ D+GLA       +    V++RY++ PE+++ ++
Sbjct:  118 QYFMYQILRGLKYIHSAGVIHRDLKPSNLLV-NENCDLKICDFGLARVQE--PQMTGYVSTRYYRAPEIMLTWQ 188          

HSP 2 Score: 34.6538 bits (78), Expect = 4.711e-11
Identity = 17/46 (36.96%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  805 FQEYDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLGN 942
            +Q Y   +++WS G + A M+ R +P F G  +  Q   I +VLGN
Sbjct:  187 WQRYGKMVDIWSAGCILAEML-RGKPLFPGKDHIHQFFLITEVLGN 231          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: SMK2B_MOUSE (Sperm motility kinase 2B OS=Mus musculus GN=Smok2b PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.322e-11
Identity = 35/120 (29.17%), Postives = 68/120 (56.67%), Query Frame = 2
Query:  464 PNVIALLDVVRDSQSKTPSL-------IFEHVNNTDFRTLYPKFQDIDVRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTEYNVRVASRYFKGPELLV 802
            PN+I+LL V+   +     +       +++H+ N  +       Q+ + R    +LL A+++CH++GI+HRD+KP N+M++ +  K+++ID+GL      G + N+   +  F  PE+L+
Sbjct:   62 PNIISLLQVIETKKKVYLIMELCEGKSLYQHIRNAGY------LQEDEARALFKQLLSAMNYCHNQGIVHRDLKPDNIMVEKDG-KVKIIDFGLGTQVKPGQKLNLFCGTYPFSAPEVLL 174          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CKB21_ORYSJ (Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp. japonica GN=CDKB2-1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.322e-11
Identity = 42/184 (22.83%), Postives = 91/184 (49.46%), Query Frame = 2
Query:  296 LENYEVVRKIGRGKYSEVFEGIN-----VVNYQXXXXXXXXXXXXXXXXXXXXXLQNLSGGPNVIALLDVVRDSQSKTPS---LIFEHVNNTDFRTLYPKFQDID------VRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAG-TEYNVRVASRYFKGPELLV 802
            ++ YE + K+G G Y +V++        +V  +                     L+ LS   +V+ LLD+ +    +  +   L+FE+++    + +    Q++       V+  +++L K + FCH +G++HRD+KPHN+++D +   L++ D GL+  +     +Y   + + +++ PE+L+
Sbjct:   25 MDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLPEDDEGVPPTALREVSLLRMLSQDSHVVRLLDLKQGQNKEGQTILYLVFEYMDTDLKKFIRAHRQNLQKIPVPTVKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRSFTVPLKKYTHEILTLWYRAPEVLL 208          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: GSK3_SCHPO (Protein kinase gsk3 OS=Schizosaccharomyces pombe GN=gsk3 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 6.951e-11
Identity = 36/100 (36.00%), Postives = 61/100 (61.00%), Query Frame = 2
Query:  518 SLIFEHVNNTDFRT--LYPK----FQDIDVRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTEYNVRVASRYFKGPELL 799
            +L+ E +  T +R   LY +       ++V+ YI++LL++L + H+ GI HRD+KP N+++D E   L+L D+G A+   AG      + SRY++ PEL+
Sbjct:  105 NLVLEFMPETIYRASRLYTRQKLSMPMLEVKLYIYQLLRSLAYIHASGICHRDIKPQNLLLDPENGILKLCDFGSAKILVAGEPNVSYICSRYYRAPELI 204          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDKL1_HUMAN (Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=CDKL1 PE=2 SV=5)

HSP 1 Score: 68.9366 bits (167), Expect = 6.951e-11
Identity = 52/178 (29.21%), Postives = 87/178 (48.88%), Query Frame = 2
Query:  296 LENYEVVRKIGRGKYSEVFEGIN-----VVNYQXXXXXXXXXXXXXXXXXXXXXLQNLSGGPNVIALLDVVRDSQSKTPSLIFEHVNNTDFRTLYPKFQDID---VRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTEYNV-RVASRYFKGPELLV 802
            +E YE + KIG G Y  VF+  N     +V  +                     L+ L   PN++ LL+V R  + +   L+FE+ ++T    L    + +    V+    + L+A++FCH    +HRDVKP N++I   +  ++L D+G A      ++Y    VA+R+++ PELLV
Sbjct:    1 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH-PNLVNLLEVFR--RKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHS-VIKLCDFGFARLLAGPSDYYTDYVATRWYRSPELLV 174          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: HOG1_EMENI (Mitogen-activated protein kinase hog1 OS=Emericella nidulans GN=hog1 PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 7.911e-11
Identity = 23/75 (30.67%), Postives = 52/75 (69.33%), Query Frame = 2
Query:  587 VRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTEYNVRVASRYFKGPELLVDFK 811
            ++Y+++++++ L + HS G++HRD+KP N++I +E   L++ D+GLA       +    V++RY++ PE+++ ++
Sbjct:  118 IQYFLYQIMRGLKYVHSAGVVHRDLKPSNILI-NENCDLKICDFGLARI--QDPQMTGYVSTRYYRAPEIMLTWQ 189          

HSP 2 Score: 31.9574 bits (71), Expect = 7.911e-11
Identity = 15/45 (33.33%), Postives = 26/45 (57.78%), Query Frame = 1
Query:  805 FQEYDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLG 939
            +Q+YD  +++WS   +FA M+    P F G  + +Q   I ++LG
Sbjct:  188 WQKYDAKVDVWSAACIFAEMLL-GAPLFPGKDHVNQFSIITELLG 231          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: MPKC_ASPCL (Mitogen-activated protein kinase mpkC OS=Aspergillus clavatus GN=mpkC PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 7.911e-11
Identity = 24/74 (32.43%), Postives = 50/74 (67.57%), Query Frame = 2
Query:  590 RYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTEYNVRVASRYFKGPELLVDFK 811
            +Y+I+++L+ L + HS  ++HRD+KP N++I +E   L++ D+GLA       +    V++RY++ PE+++ ++
Sbjct:  119 QYFIYQILRGLKYIHSANVIHRDLKPTNILI-NENCDLKICDFGLARLQE--PQMTGYVSTRYYRAPEIMLTWQ 189          

HSP 2 Score: 33.8834 bits (76), Expect = 7.911e-11
Identity = 16/46 (34.78%), Postives = 25/46 (54.35%), Query Frame = 1
Query:  805 FQEYDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLGN 942
            +Q Y   +++WS G + A M+ R +P F G  +  Q   I  +LGN
Sbjct:  188 WQRYGVQVDIWSAGCILAEML-RGKPLFPGKDHVHQFHLITNILGN 232          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 9.078e-11
Identity = 51/182 (28.02%), Postives = 88/182 (48.35%), Query Frame = 2
Query:  296 LENYEVVRKIGRGKYSEVFEGIN-----VVNYQXXXXXXXXXXXXXXXXXXXXXLQNLSGGPNVIALLDVVRDSQSKTPSLIFEHVNNTDFRTLYPKFQ-DID---VRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTE-YNVRVASRYFKGPELLVDFK 811
            ++ YE + KIG G Y  VF+  N     +V  +                     L+ L    N++ L DV+   +  T  L+FE  +  D +  +     D+D   V+  + +LLK L FCHS+ ++HRD+KP N++I+    +L+L D+GLA  +      Y+  V + +++ P++L   K
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-KNIVRLHDVLHSDKKLT--LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSLLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK 177          
The following BLAST results are available for this feature:
BLAST of DY262782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
MPKC_ASPOR4.711e-1131.08Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
SMK2B_MOUSE5.322e-1129.17Sperm motility kinase 2B OS=Mus musculus GN=Smok2b... [more]
CKB21_ORYSJ5.322e-1122.83Cyclin-dependent kinase B2-1 OS=Oryza sativa subsp... [more]
GSK3_SCHPO6.951e-1136.00Protein kinase gsk3 OS=Schizosaccharomyces pombe G... [more]
CDKL1_HUMAN6.951e-1129.21Cyclin-dependent kinase-like 1 OS=Homo sapiens GN=... [more]
HOG1_EMENI7.911e-1130.67Mitogen-activated protein kinase hog1 OS=Emericell... [more]
MPKC_ASPCL7.911e-1132.43Mitogen-activated protein kinase mpkC OS=Aspergill... [more]
CDK5_RAT9.078e-1128.02Cell division protein kinase 5 OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DG06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262782 ID=DY262782; Name=DY262782; organism=Citrus clementina; type=EST; length=1249bp
CGAGCAGCAGAGCCTGGGCCGGCGAGCTTGACAGGCACCCGATCTTCACC
TCCACCTCCGCCGCCTGTTCTCCTCCATCTTCCGCCCGCTACCACCGCCC
CGTCCGACACACCTCTCTCGCCAGCCTGACCGCTCGTTTTGCACCAACCC
CTCCATCCCCGCTGCATCCGACTCGTGTGCTGCACAGAGCGAGCGCGCTC
ACACAGTCACCATGGCGCGCGTGTACGCCGACGTCAACCAGCAGATGCCC
AGGGCATACTGGGACTATGACAGCGTCAACATCAGCTGGGGCGTGCTGGA
AAACTACGAGGTCGTGCGCAAAATAGGCCGCGGAAAATACAGCGAGGTCT
TTGAGGGCATCAACGTGGTTAACTACCAAAAATGCGTGATCAAGGTCCTC
AAGCCTGTCAAGAAAAAGAAGATCAAGCGCGAGATCAAAATCCTGCAGAA
CCTGTCTGGCGGACCCAACGTTATCGCCTTGCTCGACGTGGTGCGCGACT
CACAATCGAAAACGCCATCGCTGATATTCGAGCACGTTAACAACACCGAT
TTCCGCACGCTCTACCCCAAGTTCCAGGACATTGATGTGCGATACTACAT
CCACGAGCTCCTCAAGGCGCTGGACTTCTGCCACTCCAAGGGCATCATGC
ACCGCGATGTCAAACCTCACAACGTTATGATCGACCATGAGGCTCGCAAA
CTGCGGTTGATCGACTGGGGTCTCGCCGAGTTCTACCACGCAGGAACCGA
GTACAACGTGCGCGTTGCATCCCGTTATTTCAAGGGCCCTGAGCTGCTGG
TGGATTTCAAGAGTACGATTACAGCCTGAATATGTGGAGTCTGGGTGCTA
TGTTTGCCAGCATGATCTTTAGGAAAGAGCCGTTCTTCCACGGAAACTCG
AATTCCGATCAATTGGTGAAGATTGCGAAGGTGCTGGGAAACCAAGGATC
TGGTTCGACTACCTCGAACAATTACAAAATTGAGCTGGGACGCACAGTAC
GACGAACTTTCTTGGGCCGTTTCCCGAAAAAGAACCTGGGCATGCTTTTC
TTGAACCCCGAAAAAACCACCGTTTCCTGGAACACCCAATGCGATTGAAT
TTCCTGGGAAAAATTTTTAACCCTTCCACCCCCCAAAAAGGTTTCCCAAA
CCCAAGGAGAACTTGGGGCCCACCCCCCACATTCTCCCCCCATTCTGGGC
GAGAAGAAAAAAAAGGTGAGGAGTTTTAAAAAATTCCCCCCACACCCAC
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