DY262782

Overview
NameDY262782
Unique NameDY262782
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1249
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDC2C_DROME (Cell division control protein 2 cognate OS=Drosophila melanogaster GN=cdc2c PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.015e-14
Identity = 55/183 (30.05%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  293 VLENYEVVRKIGRGKYSEVFEGINV-----VNYQXXXXXXXXXXXXXXXXXXXXXLQNLSGGPNVIALLDVVRDSQSKTPSLIFEHVNNTDFRTLYPKFQDID----VRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTE-YNVRVASRYFKGPELLVDFK 811
            +L+N++   KIG G Y  V++  +      V  +                     L+NL   PNV+ L DVV    +    +IFE++N  D + L  K +D+     ++ Y+H++L A+ FCH+  I+HRD+KP N+++D  A K++L D+GLA  ++     Y   V + +++ PE+L+  K
Sbjct:    4 ILDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNLKH-PNVVQLFDVVISGNNLY--MIFEYLN-MDLKKLMDKKKDVFTPQLIKSYMHQILDAVGFCHTNRILHRDLKPQNLLVD-TAGKIKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTK 181          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDK12_CAEEL (Putative cell division protein kinase 12 OS=Caenorhabditis elegans GN=cdtl-7 PE=3 SV=4)

HSP 1 Score: 59.3066 bits (142), Expect = 3.066e-14
Identity = 65/273 (23.81%), Postives = 116/273 (42.49%), Query Frame = 2
Query:   86 PLPPPRP---------THLSRQPDRSFCTNPSIPAASDSCAAQSERAHTVTMA----RVYADVNQQMPRAY-WDYDSVNISWGV--LENYEVVRKIGRGKYSEVFEGIN-----VVNYQXXXXXXXXXXXXXXXXXXXXXLQNLSGGPNVIALLDVVRDSQSKTPS--------LIFEHVNNTDFRTLYPK----FQDIDVRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTE-YNVRVASRYFKGPELLV 802
            P PPP P          H +     S  + P  P  +D  A+ S+R   + M     R+         R +  +  S + SW    L +Y ++ +IG G Y +V++ +N      V  +                     L+ L    N++ L+D+V D  S            L+FE+V++     L  K    F    +     +LL+ L + H+ G +HRD+K  N++++++  +L++ D GLA  +   +  Y  RV + +++ PELL+
Sbjct:  222 PRPPPAPFSIPPPSVDIHFAATASFSLSSIPPPPPQTDGGASSSKRQDPLPMPPDSKRIATRPVITTRRGHATNRPSDSDSWYKTNLTHYTMLDQIGEGTYGQVYKAVNNLTGEQVALKRVRLENEKEGFPITAIREIKILRQLHH-KNIVRLMDIVIDDISMDELKRTRANFYLVFEYVDHDLIGLLESKELVDFNKDQICSLFKQLLEGLAYIHNTGFLHRDIKCSNILVNNKG-ELKIADLGLARLWEKESRLYTNRVITLWYRPPELLL 492          

HSP 2 Score: 40.817 bits (94), Expect = 3.066e-14
Identity = 30/101 (29.70%), Postives = 49/101 (48.51%), Query Frame = 1
Query:  802 GFQEYDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLGNQGSGSTTS-------NNYKIE--LGRTVRRTFLGRFPKKNLG----MLFLNPEK 1065
            G + Y  ++++WS G M   +  RK P F+GN+   QL  I+KV G+    +          N ++++    R +R  F    P++ +     ML LNPEK
Sbjct:  493 GDERYGPAIDVWSTGCMLGELFTRK-PLFNGNNEFGQLELISKVCGSPNVDNWPELTELVGWNTFRMKRTYQRRIREEFEHIMPREAVDLLDKMLTLNPEK 592          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 3.091e-14
Identity = 47/183 (25.68%), Postives = 96/183 (52.46%), Query Frame = 2
Query:  281 ISWGVLENYEVVRKIGRGKYSEVFEGINVVNYQXXXXXXXXXXXXXXXXXXXXX----LQNLSGGPNVIALLDVVRDSQSKTPSLIFEHVNNTDFRTLYPKFQDI----DVRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTE-YNVRVASRYFKGPELLV 802
            I +G +E Y  + K+G G Y+ V++G + +                            L++L    N++ L D+V   +S T  L+FE+++  D +       +I    +V+ +++++L+ L +CH + ++HRD+KP N++I +E  +L+L D+GLA      T+ Y+  V + +++ P++L+
Sbjct:  184 IGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA-NIVTLHDIVHTDKSLT--LVFEYLDK-DLKQYMDDCGNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLI-NERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLL 361          

HSP 2 Score: 32.7278 bits (73), Expect = 3.091e-14
Identity = 16/46 (34.78%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  802 GFQEYDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLG 939
            G  EY   ++MW +G +F  M   + P F G++  D+L  I ++LG
Sbjct:  362 GSSEYSTQIDMWGVGCIFFEMASGR-PLFPGSTVEDELHLIFRLLG 406          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 3.091e-14
Identity = 47/183 (25.68%), Postives = 96/183 (52.46%), Query Frame = 2
Query:  281 ISWGVLENYEVVRKIGRGKYSEVFEGINVVNYQXXXXXXXXXXXXXXXXXXXXX----LQNLSGGPNVIALLDVVRDSQSKTPSLIFEHVNNTDFRTLYPKFQDI----DVRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTE-YNVRVASRYFKGPELLV 802
            I +G +E Y  + K+G G Y+ V++G + +                            L++L    N++ L D+V   +S T  L+FE+++  D +       +I    +V+ +++++L+ L +CH + ++HRD+KP N++I +E  +L+L D+GLA      T+ Y+  V + +++ P++L+
Sbjct:  184 IGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA-NIVTLHDIVHTDKSLT--LVFEYLDK-DLKQYMDDCGNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLI-NEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLL 361          

HSP 2 Score: 32.7278 bits (73), Expect = 3.091e-14
Identity = 16/46 (34.78%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  802 GFQEYDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLG 939
            G  EY   ++MW +G +F  M   + P F G++  D+L  I ++LG
Sbjct:  362 GSSEYSTQIDMWGVGCIFFEMASGR-PLFPGSTVEDELHLIFRLLG 406          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDKL5_HUMAN (Cyclin-dependent kinase-like 5 OS=Homo sapiens GN=CDKL5 PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.951e-14
Identity = 36/99 (36.36%), Postives = 56/99 (56.57%), Query Frame = 2
Query:  521 LIFEHVNNTDFRTLYPKFQDID---VRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAG--TEYNVRVASRYFKGPELLV 802
            L+FE+V       L      +    V+ YI++L+KA+ +CH   I+HRD+KP N++I H    L+L D+G A     G    Y   VA+R+++ PELL+
Sbjct:   87 LVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHN-DVLKLCDFGFARNLSEGNNANYTEYVATRWYRSPELLL 184          

HSP 2 Score: 34.6538 bits (78), Expect = 3.951e-14
Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 1
Query:  814 YDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLG 939
            Y  S++MWS+G +   +    +P F G S  DQL  I KVLG
Sbjct:  188 YGKSVDMWSVGCILGELS-DGQPLFPGESEIDQLFTIQKVLG 228          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDKL5_MOUSE (Cyclin-dependent kinase-like 5 OS=Mus musculus GN=Cdkl5 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 3.960e-14
Identity = 36/99 (36.36%), Postives = 56/99 (56.57%), Query Frame = 2
Query:  521 LIFEHVNNTDFRTLYPKFQDID---VRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAG--TEYNVRVASRYFKGPELLV 802
            L+FE+V       L      +    V+ YI++L+KA+ +CH   I+HRD+KP N++I H    L+L D+G A     G    Y   VA+R+++ PELL+
Sbjct:   87 LVFEYVEKNMLELLEEMPNGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHN-DVLKLCDFGFARNLSEGNNANYTEYVATRWYRSPELLL 184          

HSP 2 Score: 34.6538 bits (78), Expect = 3.960e-14
Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 1
Query:  814 YDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLG 939
            Y  S++MWS+G +   +    +P F G S  DQL  I KVLG
Sbjct:  188 YGKSVDMWSVGCILGELS-DGQPLFPGESEIDQLFTIQKVLG 228          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.016e-14
Identity = 47/183 (25.68%), Postives = 95/183 (51.91%), Query Frame = 2
Query:  281 ISWGVLENYEVVRKIGRGKYSEVFEGINVVNYQXXXXXXXXXXXXXXXXXXXXX----LQNLSGGPNVIALLDVVRDSQSKTPSLIFEHVNNTDFRTLYPKFQDI----DVRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTE-YNVRVASRYFKGPELLV 802
            I +G +E Y  + K+G G Y+ V++G + +                            L++L    N++ L D+V   +S T  L+FE+++  D +        I    +V+ +++++L+ L +CH + ++HRD+KP N++I +E  +L+L D+GLA      T+ Y+  V + +++ P++L+
Sbjct:  184 IGFGKMETYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA-NIVTLHDIVHTDKSLT--LVFEYLDK-DLKQYMDDCGSIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLI-NERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLL 361          

HSP 2 Score: 32.7278 bits (73), Expect = 4.016e-14
Identity = 16/46 (34.78%), Postives = 26/46 (56.52%), Query Frame = 1
Query:  802 GFQEYDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLG 939
            G  EY   ++MW +G +F  M   + P F G++  D+L  I ++LG
Sbjct:  362 GSSEYSTQIDMWGVGCIFFEMASGR-PLFPGSTVEDELHLIFRLLG 406          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDC2_DROME (Cell division control protein 2 homolog OS=Drosophila melanogaster GN=cdc2 PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 4.082e-14
Identity = 41/178 (23.03%), Postives = 85/178 (47.75%), Query Frame = 2
Query:  296 LENYEVVRKIGRGKYSEVFEGIN-----VVNYQXXXXXXXXXXXXXXXXXXXXXLQNLSGGPNVIALLDVVRDSQSKTPSLIFEHVNNTDFRTLYPKFQDID---VRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTE-YNVRVASRYFKGPELLV 802
            +E++E + KIG G Y  V++G N     +V  +                     L+ L    N++ L DV+ +         F  ++   +    P  + ++   VR Y++++  A+ FCH + ++HRD+KP N++ID ++  +++ D+GL   +      Y   + + +++ PE+L+
Sbjct:    1 MEDFEKIEKIGEGTYGVVYKGRNRLTGQIVAMKKIRLESDDEGVPSTAIREISLLKELKH-ENIVCLEDVLMEENRIYLIFEFLSMDLKKYMDSLPVDKHMESELVRSYLYQITSAILFCHRRRVLHRDLKPQNLLID-KSGLIKVADFGLGRSFGIPVRIYTHEIVTLWYRAPEVLL 176          

HSP 2 Score: 40.0466 bits (92), Expect = 4.082e-14
Identity = 19/53 (35.85%), Postives = 31/53 (58.49%), Query Frame = 1
Query:  778 FQGP*AAGGFQEYDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVL 936
            ++ P    G   Y   +++WS+G +FA M  RK P F G+S  DQL ++ ++L
Sbjct:  169 YRAPEVLLGSPRYSCPVDIWSIGCIFAEMATRK-PLFQGDSEIDQLFRMFRIL 220          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 4.085e-14
Identity = 34/117 (29.06%), Postives = 66/117 (56.41%), Query Frame = 2
Query:  467 NVIALLDVVRDSQSKTPSLIFEHVNNTDFRTL--YPKF--QDIDVRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTE-YNVRVASRYFKGPELLV 802
            N++ L DVV     K   L+FE+++    + +   P+F      V+ +++++L  + +CHS  ++HRD+KP N++ID     L+L D+GLA  +      +   V + +++ PE+L+
Sbjct:   59 NIVRLQDVVHSD--KRLYLVFEYLDLDLKKHMDSSPEFIKDPRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILL 173          

HSP 2 Score: 39.2762 bits (90), Expect = 4.085e-14
Identity = 28/99 (28.28%), Postives = 48/99 (48.48%), Query Frame = 1
Query:  778 FQGP*AAGGFQEYDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLGNQGS----GSTTSNNYKIELGRTVRRTFLGRFPKKNLGMLFLNPE 1062
            ++ P    G + Y   +++WS+G +FA M  R+ P   G+S  D+L KI ++LG        G T+  ++K         +   R+P K+L  +  N E
Sbjct:  166 YRAPEILLGSRHYSTPVDVWSVGCIFAEMANRR-PLSPGDSEIDELFKIFRILGTPNEDTWPGVTSLPDFK---------STFPRWPSKDLATVVPNLE 254          
BLAST of DY262782 vs. ExPASy Swiss-Prot
Match: HOG1_WALSE (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia sebi GN=HOG1 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 5.315e-14
Identity = 37/116 (31.90%), Postives = 69/116 (59.48%), Query Frame = 2
Query:  467 NVIALLDVVRDSQSKTPSLIFEHVNNTDFRTLYPK-FQDIDVRYYIHELLKALDFCHSKGIMHRDVKPHNVMIDHEARKLRLIDWGLAEFYHAGTEYNVRVASRYFKGPELLVDFK 811
            N+I+LLDV   S  +    I E +     R L  +  +   V+Y+++++L+AL F H  G++HRD+KP N++I +E   L++ D+GLA       +    V++RY++ PE+++ ++
Sbjct:   13 NIISLLDVFI-SPGEDIYFITELLGTDLHRLLSSRPLERQFVQYFLYQMLRALKFVHPAGVVHRDLKPSNILI-NENCDLKICDFGLARL--QDPQMTGYVSTRYYRAPEIMLTWQ 124          

HSP 2 Score: 40.0466 bits (92), Expect = 5.315e-14
Identity = 19/46 (41.30%), Postives = 31/46 (67.39%), Query Frame = 1
Query:  805 FQEYDYSLNMWSLGAMFASMIFRKEPFFHGNSNSDQLVKIAKVLGN 942
            +QEYD ++++WS+G +FA MI  + P F G  +  QL  I ++LG+
Sbjct:  123 WQEYDSAVDIWSVGCIFAEMIDGR-PIFPGKDHVHQLTVITELLGS 167          
The following BLAST results are available for this feature:
BLAST of DY262782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
CDC2C_DROME3.015e-1430.05Cell division control protein 2 cognate OS=Drosoph... [more]
CDK12_CAEEL3.066e-1423.81Putative cell division protein kinase 12 OS=Caenor... [more]
CDK17_MOUSE3.091e-1425.68Cell division protein kinase 17 OS=Mus musculus GN... [more]
CDK17_HUMAN3.091e-1425.68Cell division protein kinase 17 OS=Homo sapiens GN... [more]
CDKL5_HUMAN3.951e-1436.36Cyclin-dependent kinase-like 5 OS=Homo sapiens GN=... [more]
CDKL5_MOUSE3.960e-1436.36Cyclin-dependent kinase-like 5 OS=Mus musculus GN=... [more]
CDK17_RAT4.016e-1425.68Cell division protein kinase 17 OS=Rattus norvegic... [more]
CDC2_DROME4.082e-1423.03Cell division control protein 2 homolog OS=Drosoph... [more]
CDC21_MEDSA4.085e-1429.06Cell division control protein 2 homolog 1 (Fragmen... [more]
HOG1_WALSE5.315e-1431.90Mitogen-activated protein kinase HOG1 (Fragment) O... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DG06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262782 ID=DY262782; Name=DY262782; organism=Citrus clementina; type=EST; length=1249bp
CGAGCAGCAGAGCCTGGGCCGGCGAGCTTGACAGGCACCCGATCTTCACC
TCCACCTCCGCCGCCTGTTCTCCTCCATCTTCCGCCCGCTACCACCGCCC
CGTCCGACACACCTCTCTCGCCAGCCTGACCGCTCGTTTTGCACCAACCC
CTCCATCCCCGCTGCATCCGACTCGTGTGCTGCACAGAGCGAGCGCGCTC
ACACAGTCACCATGGCGCGCGTGTACGCCGACGTCAACCAGCAGATGCCC
AGGGCATACTGGGACTATGACAGCGTCAACATCAGCTGGGGCGTGCTGGA
AAACTACGAGGTCGTGCGCAAAATAGGCCGCGGAAAATACAGCGAGGTCT
TTGAGGGCATCAACGTGGTTAACTACCAAAAATGCGTGATCAAGGTCCTC
AAGCCTGTCAAGAAAAAGAAGATCAAGCGCGAGATCAAAATCCTGCAGAA
CCTGTCTGGCGGACCCAACGTTATCGCCTTGCTCGACGTGGTGCGCGACT
CACAATCGAAAACGCCATCGCTGATATTCGAGCACGTTAACAACACCGAT
TTCCGCACGCTCTACCCCAAGTTCCAGGACATTGATGTGCGATACTACAT
CCACGAGCTCCTCAAGGCGCTGGACTTCTGCCACTCCAAGGGCATCATGC
ACCGCGATGTCAAACCTCACAACGTTATGATCGACCATGAGGCTCGCAAA
CTGCGGTTGATCGACTGGGGTCTCGCCGAGTTCTACCACGCAGGAACCGA
GTACAACGTGCGCGTTGCATCCCGTTATTTCAAGGGCCCTGAGCTGCTGG
TGGATTTCAAGAGTACGATTACAGCCTGAATATGTGGAGTCTGGGTGCTA
TGTTTGCCAGCATGATCTTTAGGAAAGAGCCGTTCTTCCACGGAAACTCG
AATTCCGATCAATTGGTGAAGATTGCGAAGGTGCTGGGAAACCAAGGATC
TGGTTCGACTACCTCGAACAATTACAAAATTGAGCTGGGACGCACAGTAC
GACGAACTTTCTTGGGCCGTTTCCCGAAAAAGAACCTGGGCATGCTTTTC
TTGAACCCCGAAAAAACCACCGTTTCCTGGAACACCCAATGCGATTGAAT
TTCCTGGGAAAAATTTTTAACCCTTCCACCCCCCAAAAAGGTTTCCCAAA
CCCAAGGAGAACTTGGGGCCCACCCCCCACATTCTCCCCCCATTCTGGGC
GAGAAGAAAAAAAAGGTGAGGAGTTTTAAAAAATTCCCCCCACACCCAC
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