DY262785

Overview
NameDY262785
Unique NameDY262785
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1188
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY262785 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 7.180e-18
Identity = 42/106 (39.62%), Postives = 68/106 (64.15%), Query Frame = 3 
Query:  258 LFDSCEELDSCLADYVYQISEAAIRERGSFSLVLSGGDMPNRLGKLTRPPFLRTVDWSKWHVFWAEENVVPKRHPDSFYRQAQEAFISKVLLLFIHLFTLHALLAS 575
            +F +  EL   +A+Y   +S   I+E+G F++VLSGGD+ + L KL +PP++ +++W KWHVFW +E V     PDS Y+ A E F+SKV +   +++ +   LA+
Sbjct:    8 VFPTKNELSEAMAEYTANLSAKFIKEKGLFTVVLSGGDLIDWLCKLVQPPYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAA 113
[Close]
BLAST of DY262785 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.654e-17
Identity = 39/100 (39.00%), Postives = 64/100 (64.00%), Query Frame = 3 
Query:  228 IMERREPELRLFDSCEELDSCLADYVYQISEAAIRERGSFSLVLSGGDMPNRLGKLTRPPFLRTVDWSKWHVFWAEENVVPKRHPDSFYRQAQEAFISKV 527
            I +  +  + ++D  E L   LA +   +S+   +ERG+F++V+SGG +   L KL   P++ ++DW++WH FW +E VVPK H DS Y+ A ++F+SKV
Sbjct:   75 IGKEEKKRVEIYDLEENLVIDLAKFTADLSDKFCKERGAFTVVVSGGSLIKSLRKLVESPYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKV 174
[Close]
BLAST of DY262785 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.554e-15
Identity = 39/91 (42.86%), Postives = 57/91 (62.64%), Query Frame = 3 
Query:  255 RLFDSCEELDSCLADYVYQISEAAIRERGSFSLVLSGGDMPNRLGKLTRPPFLRTVDWSKWHVFWAEENVVPKRHPDSFYRQAQEAFISKV 527
            R+F +  E+   LA Y   +S    +ERG F++VLSGGD+   L KL   P++ +++WSKWH+FW +E V    H DS Y+ A + F+SKV
Sbjct:    7 RVFKTNNEMAVELAKYTADLSSKFCKERGVFTVVLSGGDLIAWLWKLLEAPYIDSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKV 97
The following BLAST results are available for this feature:
BLAST of DY262785 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
6PGL3_ARATH7.180e-1839.62Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL5_ARATH4.654e-1739.00Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL2_ARATH2.554e-1542.86Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DG09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262785 ID=DY262785; Name=DY262785; organism=Citrus clementina; type=EST; length=1188bp
CACTGAGCAGGTAATTTATTGTTTTCAAGCTCCACAAGTAAACGAGGCTT
CGTCGTTTTCGTTGTCCATTCACGCACACTGTATATTATATGTTGTCGGC
TCACGGTCCTCTTGTCTTTTATATATGTGTAATGTACTAGAAACTAACTA
GAAAGCTATAGGGCTGTAAAAGAGAAGCCTCACGACTCACGTACCGTATC
AGAAAGAAAGAGAGGGGTTGGCTGATAATAATGGAGAGGAGAGAGCCAGA
ACTGAGATTGTTCGATAGCTGTGAAGAACTCGACTCATGCCTCGCTGATT
ACGTGTATCAAATATCCGAAGCTGCTATAAGGGAGAGAGGCTCTTTTTCG
CTTGTTCTCTCTGGGGGAGATATGCCAAATCGCTTAGGGAAGCTCACAAG
GCCACCGTTCTTGAGAACCGTGGACTGGTCAAAATGGCATGTGTTTTGGG
CTGAAGAGAACGTGGTTCCTAAGAGACATCCCGATAGCTTCTACAGACAA
GCCCAGGAAGCATTCATCTCAAAGGTTCTACTGTTATTTATCCACTTATT
TACTCTTCATGCGTTGCTTGCGTCGTTGATTGATAGAAACGGAATGTATG
GCTTTGGTTTTCCCCTTGCATTGCATGCAAATTAGGAGGGTAATGATATA
AGCTTACGTATGCTGTGTCTGTGTCCTAAACCAATCATAGAGAACCGCTG
TTCTGAACAAATTCAATTGTTACTGTAACCACTTAAAAATTCTGGAAATT
GACTAGTGCATAGTGCAAGTATACGTACAGCAATATTAGTATTACAATAC
CCACCGGAAAAGTCTTCGGTGCTCTAACTAAGCTAATAATAATGAGAGAG
AGCAACAGATTTGCTTTACTCCGTAGTGGTCATTGAGTCATCAAAAACTT
GCTGACACGTATTGAACTGTTGTAAATATTGGTCTTAGGCCCATTAAACT
TGGACGGCCCACCACCGACCTTTGAACATCTATCATCATTTCTTTTCTTG
GTGCAGGTACCCCTACTGGCGGCTCACGTTAATTCTGTGAACCCAGGGCG
TACCCGGGAGAATCAGCTTGCCAATTACTACAAATTTCTCCTTCGGGCAA
CAGGGTTAAAAACGGAAAGGTTCCTGTTTTTTCCTTCAAGGGAATGTTCC
CCAATTTCAACCTTTGTTTCTTTATACTCTGGGGGAAC
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