DY262794

Overview
NameDY262794
Unique NameDY262794
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1178
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL2_DEBHA (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Debaryomyces hansenii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.023e-21
Identity = 47/101 (46.53%), Postives = 70/101 (69.31%), Query Frame = 2
Query:  104 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRYFSH 406
            SC GAA GTAKSG+G++ +G  +PEL+MKS++PVVM+G+L +YGL+++V+I+ G++P  ++Y LF+G+                  +IGIVGD GVR F H
Sbjct:   29 SCAGAAIGTAKSGIGISGIGTFKPELIMKSLIPVVMSGILSVYGLVVSVLIAGGLSP-TENYSLFNGFMHLACGLSVGFACLASGYSIGIVGDEGVRQFMH 128          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL2_ASHGO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Ashbya gossypii GN=VMA11 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 4.023e-21
Identity = 48/101 (47.52%), Postives = 69/101 (68.32%), Query Frame = 2
Query:  104 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRYFSH 406
            S +GAA GTAKSG+G++ +G  RPEL+MKS++PVVM+G+L +YGL++AV+++ G++P  + Y LF+G+                  AIGIVGD GVR F H
Sbjct:   29 SSLGAAIGTAKSGIGISGIGTFRPELIMKSLIPVVMSGILAVYGLVVAVLVAGGLSP-TEEYTLFNGFMHLAAGLCVGFACLSSGYAIGIVGDVGVRKFMH 128          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Neurospora crassa GN=vma-3 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.255e-21
Identity = 49/97 (50.52%), Postives = 69/97 (71.13%), Query Frame = 2
Query:  104 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            +C+GA+YGTAKSGVG+A+MGV+RP+L++K+IVPV+MAG++GIYGL+++V+IS  +      Y L+ G+                  AIGIVGDAGVR
Sbjct:   24 TCLGASYGTAKSGVGIAAMGVLRPDLIVKNIVPVIMAGIIGIYGLVVSVLISDALT--QDHYALYTGFIQLGAGLAVGLAGLAAGFAIGIVGDAGVR 118          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_DROME (V-type proton ATPase 16 kDa proteolipid subunit OS=Drosophila melanogaster GN=Vha16 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 5.255e-21
Identity = 52/97 (53.61%), Postives = 67/97 (69.07%), Query Frame = 2
Query:  104 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+  +   +K Y L+ G+                  AIGIVGDAGVR
Sbjct:   28 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIAGALEEPSK-YSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVR 123          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_NEPNO (V-type proton ATPase 16 kDa proteolipid subunit OS=Nephrops norvegicus PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 8.963e-21
Identity = 52/97 (53.61%), Postives = 68/97 (70.10%), Query Frame = 2
Query:  104 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            S +GAAYGTAKSGVG+++M VMRPEL+MK I+PVVMAG++ IYGL++AV+I+ G   +A +Y L+ G+                  AIGIVGDAGVR
Sbjct:   25 SALGAAYGTAKSGVGISAMSVMRPELIMKCIIPVVMAGIIAIYGLVVAVLIA-GKLDEAPTYTLYQGFVHMGAGLSVGLSGLAAGFAIGIVGDAGVR 120          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_ASCSU (V-type proton ATPase 16 kDa proteolipid subunit OS=Ascaris suum GN=12 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.171e-20
Identity = 48/95 (50.53%), Postives = 65/95 (68.42%), Query Frame = 2
Query:  110 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            +GAAYGTAKS VG++SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++   +   +  Y L  G+                  AIGIVGDAGVR
Sbjct:   31 LGAAYGTAKSAVGISSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLRGKVTSASAGYTLDKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVR 125          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL2_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis elegans GN=vha-2 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 1.529e-20
Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 2
Query:  110 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            +GAAYGTAKS VG+ SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++   +   +  Y L  G+                  AIGIVGDAGVR
Sbjct:   31 LGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVTSASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVR 125          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL2_CAEBR (V-type proton ATPase 16 kDa proteolipid subunit 2/3 OS=Caenorhabditis briggsae GN=vha-2 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.529e-20
Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 2
Query:  110 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            +GAAYGTAKS VG+ SMGVMRPEL+MKS++PV+MAG++GIYGL++A+++   +   +  Y L  G+                  AIGIVGDAGVR
Sbjct:   31 LGAAYGTAKSAVGICSMGVMRPELIMKSVIPVIMAGIIGIYGLVVAMVLKGKVQAASAGYDLNKGFAHLAAGLTCGLCGLGAGYAIGIVGDAGVR 125          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_SHEEP (V-type proton ATPase 16 kDa proteolipid subunit OS=Ovis aries GN=ATP6V0C PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.810e-20
Identity = 55/122 (45.08%), Postives = 70/122 (57.38%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            MS A  G E A              S +GAAYGTAKSG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I+  +N       L+  +                  AIGIVGDAGVR
Sbjct:    1 MSEAKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLN---DGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVR 119          
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_BOVIN (V-type proton ATPase 16 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0C PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 7.588e-20
Identity = 55/122 (45.08%), Postives = 70/122 (57.38%), Query Frame = 2
Query:   29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394
            MS A  G E A              S +GAAYGTAKSG G+A+M VMRPE++MKSI+PVVMAG++ IYGL++AV+I+  +N       L+  +                  AIGIVGDAGVR
Sbjct:    1 MSEAKNGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAGIIAIYGLVVAVLIANSLN---DGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVR 119          
The following BLAST results are available for this feature:
BLAST of DY262794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL2_DEBHA4.023e-2146.53V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL2_ASHGO4.023e-2147.52V-type proton ATPase 16 kDa proteolipid subunit 2 ... [more]
VATL_NEUCR5.255e-2150.52V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_DROME5.255e-2153.61V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_NEPNO8.963e-2153.61V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ASCSU1.171e-2050.53V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_CAEEL1.529e-2050.53V-type proton ATPase 16 kDa proteolipid subunit 2/... [more]
VATL2_CAEBR1.529e-2050.53V-type proton ATPase 16 kDa proteolipid subunit 2/... [more]
VATL_SHEEP5.810e-2045.08V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BOVIN7.588e-2045.08V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DH06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262794 ID=DY262794; Name=DY262794; organism=Citrus clementina; type=EST; length=1178bp
CGATCGGTTCTTTTTAGGAGGAATTGAAATGTCATCCGCGTTCATTGGCG
ATGAAACGGCGCCTTTTTTCGGCTTCCTCGGCGCCGCTGCCGCCCTTGTT
TTCTCCTGCATGGGAGCAGCGTATGGGACGGCGAAGAGTGGAGTGGGCGT
AGCATCGATGGGAGTGATGAGGCCAGAGCTTGTAATGAAATCGATTGTGC
CAGTTGTGATGGCGGGAGTGTTAGGTATTTATGGTTTAATTATTGCTGTT
ATTATTAGTACTGGCATTAACCCAAAGGCCAAATCATATTATCTATTCGA
TGGCTACGCTCATTTGTCTTCGGGTCTCGCTTGCGGCCTCGCTGGTCTCT
CTGCTGGTATGGCTATTGGCATCGTTGGTGATGCTGGTGTCAGGTATTTT
TCTCACATTTTTTTTTATATCATTTCACTTATTGATTTAAATAAAATTTT
TCATTTTTCATTTCATATTAATTTTTATGTTCTAGTCTTCAAGTTCTTTT
ACGAAGATGACAGAGTGTATTTGTATGACTGAATTTGATGCTGCCAATTG
CCAAATGTGACCGTAGTAACACCCTTAAAGACCATGCACAAAGCATAATA
TCCTGTGAAGAGTTGATGTCTTTGATAAAGAGAACTATAAAATGAATTTA
ATTTTACAATATGTGTAAATGAGGCCTGCTTAATTCTTATCTTTTTTCTG
TTAGTTTTGAAATCTATTGATTCATGTTTGATAGATGGTGTGGCTTTTGG
TTCATTAACTTGTTAAATATGTTGAGTAATCACAGTTTTGGTTAATTTTT
TGCTTCTGTATTTACTATTAGCATTTTGTTCTAATCTGATAACAGTGCCG
CATTATTGAAGCAAGATAATAGTAGCTTCATTGTACAGAGTGAAACATCA
CGACATTTTGCATGAACATGCATATGGCTGTGCTTTTCCTTTAGCTGTGT
CTTTGATTATCAGATTTCCTGAGGTCTTTCATCTTGGGTTCTGGTGAGGA
CCCTGAAGCCATAAATTGCTCCTCATCCAAAAAAATGAATCTGCTTTAGT
TTGGATGAATTGACCCAATTGCATAATTTGGCTTTGTTTACCGGAATTCT
ACTGGAGGTGGTTTGAATTTTTTCCCCAAAACTGGCTTGGGCGTCTCAAG
GGGGGGTTTAAAATCCTGGTTTGCCTTT
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