DY262794
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_TORMA (V-type proton ATPase 16 kDa proteolipid subunit OS=Torpedo marmorata PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.294e-19 Identity = 51/97 (52.58%), Postives = 64/97 (65.98%), Query Frame = 2 Query: 104 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394 S +GAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ N + LF + AIGIVGDAGVR Sbjct: 25 SALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTEDISLFKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVR 118
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_DICDI (V-type proton ATPase proteolipid subunit OS=Dictyostelium discoideum GN=vatP PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.294e-19 Identity = 57/127 (44.88%), Postives = 77/127 (60.63%), Query Frame = 2 Query: 110 MGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRYF-SHIFFYIISLIDLNKIFHFSFHINFYVLV 487 MGAAYGTAK+ VG+++MGVM+P+LV+K+ +PV+ AGV+ IYGLII VI+ GI P A +Y L + MAIGIVGD+GVR F Y+I ++ I FS + Y L+ Sbjct: 45 MGAAYGTAKASVGISNMGVMKPDLVIKAFIPVIFAGVIAIYGLIICVILVGGIKPNA-NYTLMKSFTDLGAGLTVGLCGLAAGMAIGIVGDSGVRAFGQQPKLYVIMML----ILIFSEALGLYGLI 166
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_HUMAN (V-type proton ATPase 16 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0C PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.208e-19 Identity = 54/122 (44.26%), Postives = 69/122 (56.56%), Query Frame = 2 Query: 29 MSSAFIGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394 MS + G E A S +GAAYGTAKSG G+A+M VMRPE +MKSI+PVVMAG++ IYGL++AV+I+ +N L+ + AIGIVGDAGVR Sbjct: 1 MSESKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAIYGLVVAVLIANSLNDDIS---LYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVR 119
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_RAT (V-type proton ATPase 16 kDa proteolipid subunit OS=Rattus norvegicus GN=Atp6v0c PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.883e-19 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 104 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394 S MGAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ N L+ + AIGIVGDAGVR Sbjct: 26 SAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVR 119
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_MOUSE (V-type proton ATPase 16 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0c PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.883e-19 Identity = 51/97 (52.58%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 104 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394 S MGAAYGTAKSG G+A+M VMRPEL+MKSI+PVVMAG++ IYGL++AV+I+ N L+ + AIGIVGDAGVR Sbjct: 26 SAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA---NSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVR 119
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL1_CAEEL (V-type proton ATPase 16 kDa proteolipid subunit 1 OS=Caenorhabditis elegans GN=vha-1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 6.424e-19 Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 2 Query: 113 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRYFS 403 G+AYGTAK+G G+ASM V RP+LVMK+I+PVVMAG++ IYGL++AVI+S + P +Y + + + AIGI GDAGVR S Sbjct: 40 GSAYGTAKAGTGIASMAVARPDLVMKAIIPVVMAGIVAIYGLVVAVIVSGKVEPAGANYTINNAFSQFAGGLVCGLCGLGAGYAIGIAGDAGVRALS 136
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL2_SCHPO (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Schizosaccharomyces pombe GN=vma11 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.431e-18 Identity = 45/110 (40.91%), Postives = 70/110 (63.64%), Query Frame = 2 Query: 104 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRYFSHIFFYIISLI 433 SC+GA YGTA +G G+A++G RPE+VMKS++PVVM+G++G+YGL+++V+I+ ++P Y LF G+ AIG+VGD GV+ F +S++ Sbjct: 25 SCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSGIIGVYGLVMSVLIAGDMSPD-NDYSLFSGFIHLSAGLAVGLTGVAAGYAIGVVGDRGVQSFMRQDRIFVSMV 133
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL2_NEUCR (V-type proton ATPase 16 kDa proteolipid subunit 2 OS=Neurospora crassa GN=vma-11 PE=2 SV=2) HSP 1 Score: 92.4337 bits (228), Expect = 5.438e-18 Identity = 46/117 (39.32%), Postives = 71/117 (60.68%), Query Frame = 2 Query: 113 GAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINP--KAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRYF---SHIFFYIISLIDLNKI 448 GAAYGTAKSG+G+A +G RP+L+MK ++PVVM+G++ +Y L++AV+I+ + P + Y LF+G+ IGIVGD GVR F S IF ++ ++ ++ Sbjct: 33 GAAYGTAKSGIGIAGVGTFRPDLIMKCLIPVVMSGIIAVYALVVAVLIAQDLGPPGSGQHYSLFNGFMHLACGLSVGLTGLAAGYCIGIVGDKGVRSFMLQSRIFVGMVLILIFGEV 149
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_CANTR (V-type proton ATPase 16 kDa proteolipid subunit OS=Candida tropicalis GN=VMA3 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.582e-17 Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = 2 Query: 104 SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394 +C GA+YGTAKSGVG+ + V RP+L++K++VPVVMAG++ IYGL+++V++S ++ K L+ G+ AIGIVGDAGVR Sbjct: 24 TCFGASYGTAKSGVGICATSVTRPDLLVKNVVPVVMAGIIAIYGLVVSVLVSDSLSQKQA---LYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVR 117
BLAST of DY262794 vs. ExPASy Swiss-Prot
Match: VATL_MAIZE (V-type proton ATPase 16 kDa proteolipid subunit (Fragment) OS=Zea mays PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 2.699e-17 Identity = 48/66 (72.73%), Postives = 48/66 (72.73%), Query Frame = 2 Query: 197 VPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVR 394 VPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY MAIGIVGDAGVR Sbjct: 1 VPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVR 66 The following BLAST results are available for this feature:
BLAST of DY262794 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262794 ID=DY262794; Name=DY262794; organism=Citrus clementina; type=EST; length=1178bpback to top |