DY262796
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262796 vs. ExPASy Swiss-Prot
Match: ACOD_CYPCA (Acyl-CoA desaturase OS=Cyprinus carpio PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 8.259e-35 Identity = 88/278 (31.65%), Postives = 139/278 (50.00%), Query Frame = 2 Query: 230 PDYVKQPSSMASTSEPNRNPKYDPKKPHITDTPITKANWYKHVNWLNVTFIIGIPLAGCVAAFWTP-LKWQTALWAVVYYFWTGLGITAGYHRLWAHKSYNASLPLSVFLALVGGGAVEGSIRWWSRDHRAHHRYTDTNKDPYSVRKGLLYSHLGWMVMKQNPKRI---GRTDITDLNEDPVVVWQHKHYIKVVIFMGLIFPSAVAGLLWND--WKGGFLYAGILRIFFLHQATFCVNSLAHWLEKHPFD-NXXXXXXXXXXLCYLGKGSHTSPHNSP 1042 P + +P ++ + K PK P + + W NV + + L F P + T +W ++ LGITAG HRLW+H+SY ASLPL +FLAL A + I WSRDHR HH+Y++T+ DP++ +G +SH+GW++++++P I + +++DL D VV++Q + Y V+ M P+ V +W + W F+ A +LR + AT+ VNS AH P+D + +G+G H H P Sbjct: 9 PIWHPEPGTVEDVFDHTYKEKEGPKPPTV-------------IVWRNVILMSLLHLGALYGLFLFPSARALTWIWFFGCLLFSALGITAGAHRLWSHRSYKASLPLQIFLALGNSMAFQNDIYEWSRDHRVHHKYSETDADPHNAVRGFFFSHVGWLLVRKHPDVIEKGRKLELSDLKADKVVMFQRRFYKPSVLLMCFFVPTFVPWYVWGESLWVAYFVPA-LLRYALVLNATWLVNSAAHMWGNRPYDSSINPRENRFVTFSAIGEGFHNYHHTFP 272
BLAST of DY262796 vs. ExPASy Swiss-Prot
Match: ACOD_PIG (Acyl-CoA desaturase (Fragment) OS=Sus scrofa GN=SCD PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.409e-34 Identity = 76/233 (32.62%), Postives = 126/233 (54.08%), Query Frame = 2 Query: 362 WLNVTFIIGIPLAGCVAAFWTPL-KWQTALWAVVYYFWTGLGITAGYHRLWAHKSYNASLPLSVFLALVGGGAVEGSIRWWSRDHRAHHRYTDTNKDPYSVRKGLLYSHLGWMVMKQNP---KRIGRTDITDLNEDPVVVWQHKHYIKVVIFMGLIFPSAVAGLLWND-WKGGFLYAGILRIFFLHQATFCVNSLAHWLEKHPFD-NXXXXXXXXXXLCYLGKGSHTSPHNSP 1042 W N+ + + L P K T LWA YY + +G+TAG HRLW+H++Y A LPL VFL + A + + W+RDHRAHH++++T+ DP++ R+G +SH+GW++++++P ++ G +++DL + +V++Q ++Y ++ M I P+ V W + + A LR + AT+ VNS AH P+D L +G+G H H P Sbjct: 62 WRNIILMSLLHLGALYGIILIPTCKIYTLLWAFAYYLLSAVGVTAGAHRLWSHRTYKARLPLRVFLIIANTMAFQNDVYEWARDHRAHHKFSETDADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGLLNMSDLKAEKLVMFQRRYYKPGILLMCFILPTIVPWYCWGEAFPQSLFVATFLRYAIVLNATWLVNSAAHLYGYRPYDKTISPRENILVSLGAVGEGFHNYHHTFP 294
BLAST of DY262796 vs. ExPASy Swiss-Prot
Match: ACOD_MESAU (Acyl-CoA desaturase OS=Mesocricetus auratus GN=SCD PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.409e-34 Identity = 78/233 (33.48%), Postives = 125/233 (53.65%), Query Frame = 2 Query: 362 WLNVTFIIGIPLAGCVAAFWTPL-KWQTALWAVVYYFWTGLGITAGYHRLWAHKSYNASLPLSVFLALVGGGAVEGSIRWWSRDHRAHHRYTDTNKDPYSVRKGLLYSHLGWMVMKQNP---KRIGRTDITDLNEDPVVVWQHKHYIKVVIFMGLIFPSAVAGLLWND-WKGGFLYAGILRIFFLHQATFCVNSLAHWLEKHPFD-NXXXXXXXXXXLCYLGKGSHTSPHNSP 1042 W N+ + + L P K T LWA VYY + GI AG HRLW+H++Y A LPL +FL + A + + W+RDHRAHH++++T DP+ R+G +SH+GW++++++P ++ G+ D++DL + +V++Q ++Y ++ M I P+ V W + + + LR + AT+ VNS AH P+D N L LG+G H H P Sbjct: 68 WRNIILMALLHLGALYGLVLVPSSKVYTLLWAFVYYVISIEGIGAGVHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETYADPHDSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYYKPAILLMCFILPTFVPWYFWGEAFVNSLCVSTFLRYTLVLNATWLVNSAAHLYGYRPYDKNIDPRENALVSLGCLGEGFHNYHHAFP 300
BLAST of DY262796 vs. ExPASy Swiss-Prot
Match: ACOD2_RAT (Acyl-CoA desaturase 2 OS=Rattus norvegicus GN=Scd2 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.409e-34 Identity = 85/287 (29.62%), Postives = 146/287 (50.87%), Query Frame = 2 Query: 203 PTAGMMAVDPDYVKQPSSMASTSEPN-RNPKYDPKKPHITDTPITKANWYKHVNWLNVTFIIGIPLAGCVAAFWTP-LKWQTALWAVVYYFWTGLGITAGYHRLWAHKSYNASLPLSVFLALVGGGAVEGSIRWWSRDHRAHHRYTDTNKDPYSVRKGLLYSHLGWMVMKQNP---KRIGRTDITDLNEDPVVVWQHKHYIKVVIFMGLIFPSAVAGLLWND-WKGGFLYAGILRIFFLHQATFCVNSLAHWLEKHPFD-NXXXXXXXXXXLCYLGKGSHTSPHNSP 1042 P+ G + K P + P ++ YDP + P K + W N+ + + + P K T L+A +YY + LGITAG HRLW+H++Y A LPL +FL + A + + W+RDHRAHH++++T+ DP++ R+G +SH+GW++++++P ++ G+ D++DL + +V++Q ++Y ++ M I P+ V W + + + LR + AT+ VNS AH P+D N + +G+G H H P Sbjct: 23 PSGGQQNGGEKFEKNPHHWGADVRPEIKDDLYDPSYQD-EEGPPPKLEYV----WRNIVLMALLHIGALYGITLVPSCKVYTCLFAYLYYVISALGITAGAHRLWSHRTYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYYKPGLLLMCFILPTLVPWYCWGETFVNSLCVSTFLRYAVVLNATWLVNSAAHLYGYRPYDKNISSRENILVSMGAVGEGFHNYHHAFP 304
BLAST of DY262796 vs. ExPASy Swiss-Prot
Match: ACOD_BOVIN (Acyl-CoA desaturase OS=Bos taurus GN=SCD PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 9.131e-34 Identity = 78/233 (33.48%), Postives = 126/233 (54.08%), Query Frame = 2 Query: 362 WLNVTFIIGIPLAGCVAAFWTPL-KWQTALWAVVYYFWTGLGITAGYHRLWAHKSYNASLPLSVFLALVGGGAVEGSIRWWSRDHRAHHRYTDTNKDPYSVRKGLLYSHLGWMVMKQNP--KRIGRT-DITDLNEDPVVVWQHKHYIKVVIFMGLIFPSAVAGLLWND-WKGGFLYAGILRIFFLHQATFCVNSLAHWLEKHPFD-NXXXXXXXXXXLCYLGKGSHTSPHNSP 1042 W N+ + + L P K T +W + YY LGITAG HRLW+H++Y A LPL VFL + A + + WSRDHRAHH++++T+ DP++ R+G +SH+GW++++++P K G T +++DL + +V++Q ++Y V+ + I P+ V LW++ ++ +A + R T+ VNS AH P+D L G+G H H P Sbjct: 73 WRNIILMSLLHLGALYGITLIPTCKIYTYIWVLFYYLMGALGITAGAHRLWSHRTYKARLPLRVFLIIGNTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLNLSDLRAEKLVMFQRRYYKPGVLLLCFILPTLVPWYLWDETFQNSLFFATLFRYALGLNVTWLVNSAAHMYGYRPYDKTINPRENILVSLGAAGEGFHNYHHTFP 305
BLAST of DY262796 vs. ExPASy Swiss-Prot
Match: ACOD2_MOUSE (Acyl-CoA desaturase 2 OS=Mus musculus GN=Scd2 PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 3.470e-33 Identity = 69/205 (33.66%), Postives = 120/205 (58.54%), Query Frame = 2 Query: 362 WLNVTFIIGIPLAGCVAAFWTP-LKWQTALWAVVYYFWTGLGITAGYHRLWAHKSYNASLPLSVFLALVGGGAVEGSIRWWSRDHRAHHRYTDTNKDPYSVRKGLLYSHLGWMVMKQNP---KRIGRTDITDLNEDPVVVWQHKHYIKVVIFMGLIFPSAVAGLLWND-WKGGFLYAGILRIFFLHQATFCVNSLAHWLEKHPFD 961 W N+ + + L P K T L+A +YY + LGITAG HRLW+H++Y A LPL +FL + A + + W+RDHRAHH++++T+ DP++ R+G +SH+GW++++++P ++ G+ D++DL + +V++Q ++Y ++ M + P+ V W + + + LR + AT+ VNS AH P+D Sbjct: 72 WRNIILMALLHLGALYGITLVPSCKLYTCLFAYLYYVISALGITAGAHRLWSHRTYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYYKPDLLLMCFVLPTLVPWYCWGETFVNSLCVSTFLRYAVVLNATWLVNSAAHLYGYRPYD 276
BLAST of DY262796 vs. ExPASy Swiss-Prot
Match: ACO11_TRINI (Acyl-CoA Delta(11) desaturase OS=Trichoplusia ni GN=D11DS PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 3.470e-33 Identity = 72/217 (33.18%), Postives = 122/217 (56.22%), Query Frame = 2 Query: 326 PITKANWYKHV--NWLNVTFIIGIPLAGCVAAFWTPLKWQTALWAVVYYFWTGLGITAGYHRLWAHKSYNASLPLSVFLALVGGGAVEGSIRWWSRDHRAHHRYTDTNKDPYSVRKGLLYSHLGWMVMKQNPK--RIGRT-DITDLNEDPVVVWQHKHYIKVVIFMGLIFPSAVAGLLWNDWKGGFLYAGILRIFFLHQATFCVNSLAHWLEKHPFD 961 P T YK++ N+L ++ L G F T KW+T L++ V + + +GITAG HRLW HK++ A LPL + L + A + + W+R+HR HH+Y+DT+ DP++ +G YSH+GW+++K++P + G+T D++D+ +PV+ +Q K+ + ++ + P+ + W + + + R F TF VNS AH P+D Sbjct: 27 PKTTPRKYKYIYTNFLTFSYAHLAALYGLYLCF-TSAKWETLLFSFVLFHMSNIGITAGAHRLWTHKTFKAKLPLEIVLMIFNSLAFQNTAITWAREHRLHHKYSDTDADPHNASRGFFYSHVGWLLVKKHPDVLKYGKTIDMSDVYNNPVLKFQKKYAVPLIGTVCFALPTLIPVYCWGESWNNAWHIALFRYIFNLNVTFLVNSAAHIWGNKPYD 242
BLAST of DY262796 vs. ExPASy Swiss-Prot
Match: ADS1_ARATH (Delta-9 acyl-lipid desaturase 1 OS=Arabidopsis thaliana GN=ADS1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.498e-15 Identity = 55/173 (31.79%), Postives = 83/173 (47.98%), Query Frame = 2 Query: 434 WQTALWAVVYYFWTGLGITAGYHRLWAHKSYNASLPLSVFLALVGGGAVEGSIRWWSRDHRAHHRYTDTNKDPYSVRKGLLYSHLGWMV-MKQNPKRIG-RTDITDLNEDPVVVWQHKHYIKVVIFMGLIFPSAV---AGLLWNDWKGGFLYAGILRIFFLHQATFCVNSLAH 937 W A++ Y GLGIT YHR AH+S+ L F A G A++G W HR HH++TD+++DP+S +G +SHL W+ ++ G RT++ DL W +K + V++ L F + GL + W G + + H T +NSL H Sbjct: 61 WPALRVALIVYTVGGLGITVSYHRNLAHRSFKVPKWLEYFFAYCGLLAIQGDPIDWVSTHRYHHQFTDSDRDPHSPNEGFWFSHLLWLFDTGYLVEKCGRRTNVEDLKRQ----WYYKFLQRTVLYHILTFGFLLYYFGGLSFLTWGMG------IGVAMEHHVTCLINSLCH 223
BLAST of DY262796 vs. ExPASy Swiss-Prot
Match: ADS2_ARATH (Delta-9 acyl-lipid desaturase 2 OS=Arabidopsis thaliana GN=ADS2 PE=2 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 8.036e-14 Identity = 68/240 (28.33%), Postives = 109/240 (45.42%), Query Frame = 2 Query: 257 MASTSEPNRNPKYDPKKPHITDTPITKANW------YKHVNWLNVTFIIGIPLAGCVAAFWTPLKWQTALWAVVYYFWT--GLGITAGYHRLWAHKSYNASLPLSVFLALVGGGAVEGSIRWWSRDHRAHHRYTDTNKDPYSVRKGLLYSHLGWMVMKQN--PKRIGRTDITDLNEDPVVVWQHKHYIKVVIF--MGL-IFPSAVAGLLWNDWKGGFLYAGILRIFFLHQATFCVNSLAH 937 M+ TS N + +P P + K W ++ ++++ + + +A F+ W +ALW V + F+T GLGIT YHR AH+S+ L LA A++G W HR HH++TD+ +DP+S ++G +SHL W+ K R ++ DL W ++ K V+F +GL F + G+ + W G L + T +NSL H Sbjct: 1 MSVTSTVEENHQKNPSTPAAVEEK-KKRRWVFWDRRWRRLDYVKFSASFTVHSLALLAPFY--FTW-SALW-VTFLFYTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHRYHHQFTDSERDPHSPKEGFWFSHLLWIYDSAYLVSKCGRRANVEDLKRQ----WFYRFLQKTVLFHILGLGFFLFYLGGMSFVTW--GMGVGAALEV----HVTCLINSLCH 225
BLAST of DY262796 vs. ExPASy Swiss-Prot
Match: ADS3_ARATH (Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic OS=Arabidopsis thaliana GN=ADS3 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.371e-13 Identity = 57/201 (28.36%), Postives = 96/201 (47.76%), Query Frame = 2 Query: 347 YKHVNWLNVTFIIGIPLAGCVAAFWTPLKWQTALWAVVYYFWTGL-GITAGYHRLWAHKSYNASLPLSVFLALVGGGAVEGSIRWWSRDHRAHHRYTDTNKDPYSVRKGLLYSHLGWMVMKQN-PKRIGR-TDITDLNEDPVVVWQHKHYIKVVIFMGLIFPSAVAGLLWNDWKGGFLYAGI-LRIFFLHQATFCVNSLAH 937 +K +++ V ++ + L +A F W+ A Y TGL GIT +HR +HK++ L A G A++G+ W HR HH++ D+++DP+S G +SH+ WM +R G ++ DL + P + YI + P A+A L+ F+ G+ +RI +++ T+ VNS H Sbjct: 98 WKAMDFGAVAVVLSMHLLSLLAPF--QFNWRAVSVAFGLYIVTGLLGITLSFHRNLSHKAFKLPKWLEYLFAYCGAQALQGNPIDWVSTHRYHHQFCDSDRDPHSPLDGFWFSHMNWMFDTNTITQRCGEPNNVGDLEKQPFYRFLRTTYI--------LHPLALAVALYAMGGFPFIVWGMGVRIVWVYHITWLVNSACH 288 The following BLAST results are available for this feature:
BLAST of DY262796 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262796 ID=DY262796; Name=DY262796; organism=Citrus clementina; type=EST; length=1170bpback to top |