DY262808 | Citrus Genome Database

Overview


Name	DY262808
Unique Name	DY262808
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1331

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 2.465e-107
Identity = 179/240 (74.58%), Postives = 196/240 (81.67%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLN----TDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            MGKD +V         F+AKDY DPPPAPL+D  ELG WS YRAVIAEFIA            IGYK QTD + +       CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+RALLYMVAQCLGA+CG G VKAFQ +Y++RYGGGAN LA GY++G GLGAEI+GTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS
Sbjct:    1 MGKD-DVVQSGAGGGEFAAKDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARS 239

HSP 2 Score: 51.2174 bits (121), Expect = 2.465e-107
Identity = 24/45 (53.33%), Postives = 32/45 (71.11%), Query Frame = 2

Query:  866 RKKPGMNNGSSWVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            + KP  ++   WVG  +G  +AAFYHQYI +A AIKALGS ++NA
Sbjct:  248 KDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALGSFRSNA 292

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 366.311 bits (939), Expect = 2.466e-107
Identity = 184/237 (77.64%), Postives = 191/237 (80.59%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            M KDVE          F  +DY DPPP P  D +EL KWS YRAVIAEF+A            IGYK Q+D       CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSLIRA+LYMVAQCLGAICG GFVKAFQ SYY+RYGGGAN LADGYN GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF
Sbjct:    1 MAKDVE------GPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 231

HSP 2 Score: 45.8246 bits (107), Expect = 2.466e-107
Identity = 20/45 (44.44%), Postives = 31/45 (68.89%), Query Frame = 2

Query:  866 RKKPGMNNGSSWVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            + KP  ++   WVG FIG  +AAFYHQ++ +A+  K+LGS ++ A
Sbjct:  239 KSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRSAA 283

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 1.051e-106
Identity = 176/238 (73.95%), Postives = 195/238 (81.93%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            MGK+ +V            +DY DPPPAPL+D +ELG+WS YRAVIAEF+A            IGYK QTD + + D   CGGVG+LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RA+LY+VAQCLGA+CG   VK FQ S+Y+RYGGGANELA GY+KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIP+TGTGINPARS
Sbjct:    1 MGKEADVEAG-------GVRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQSSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARS 231

HSP 2 Score: 37.3502 bits (85), Expect = 1.051e-106
Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            WVG FIG  +AA YHQ + +A+A +  GS ++NA
Sbjct:  251 WVGPFIGAAIAALYHQIVLRASA-RGYGSFRSNA 283

HSP 3 Score: 36.1946 bits (82), Expect = 1.051e-106
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAAV+YN  KAW +QWIF
Sbjct:  233 GAAVVYNNSKAWSDQWIF 250

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP25_MAIZE (Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.327e-106
Identity = 179/238 (75.21%), Postives = 192/238 (80.67%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            M KD+E A           KDY DPPPAPL+D EEL KWS YRAVIAEF+A            IGYK QTD   +     CGGVG+LGIAWAFGGMIFILVYCTAG+SGGHINPAVTFGLFL RKVSL+RALLY+VAQCLGAICG G VK FQ ++Y RYGGGANEL+ GY+KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS
Sbjct:    1 MAKDIEAAAAH------EGKDYSDPPPAPLVDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKGFQSAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 232

HSP 2 Score: 37.7354 bits (86), Expect = 2.327e-106
Identity = 14/18 (77.78%), Postives = 16/18 (88.89%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAAVIYN +KAWD+ WIF
Sbjct:  234 GAAVIYNNDKAWDDHWIF 251

HSP 3 Score: 37.7354 bits (86), Expect = 2.327e-106
Identity = 18/29 (62.07%), Postives = 22/29 (75.86%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGS 985
            WVG FIG  +AA YHQY+ +A+A K LGS
Sbjct:  252 WVGPFIGAAIAAAYHQYVLRASAAK-LGS 279

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 344.354 bits (882), Expect = 3.033e-106
Identity = 168/220 (76.36%), Postives = 180/220 (81.82%), Query Frame = 3

Query:  183 SAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            S KDY DPPP    +  EL KWSFYRAVIAEFIA            IG+KSQTD N     C  VG+LGI+WAFGGMIFILVYCTAGISGGHINPAVTFGLFL  KVSL+RA+ YMVAQCLGA CG G VK FQ +YYNRYGGGAN L+DGYN G G+GAEIIGTFVLVYTVFSATDPKR+ARDSH+PVLAPLPIGF+VFMVHLATIPITGTGINPARSF
Sbjct:   13 SGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGFKSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQSTYYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMVHLATIPITGTGINPARSF 232

HSP 2 Score: 43.8986 bits (102), Expect = 3.033e-106
Identity = 17/32 (53.12%), Postives = 26/32 (81.25%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQN 994
            WVG F+G  +AAFYHQ++ +A A+KA GS+++
Sbjct:  251 WVGPFVGAAIAAFYHQFVLRAGAMKAYGSVRS 282

HSP 3 Score: 41.9726 bits (97), Expect = 3.033e-106
Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 1

Query:  841 FGAAVIYNKEKAWDEQWIF 897
            FGAAVIYN +KAWD+QWIF
Sbjct:  232 FGAAVIYNNQKAWDDQWIF 250

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 7.828e-106
Identity = 184/247 (74.49%), Postives = 192/247 (77.73%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFWSCCDLQQGK 872
            M KDVE          F  +DY DPPP P  D EEL KWS YRAVIAEF+A            IGYK Q+D       CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSLIRA+LYMVAQCLGAICG GFVKAFQ S+Y  YGGGAN LADGYN GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF +     + K
Sbjct:    1 MAKDVE------GPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSK 241

HSP 2 Score: 45.8246 bits (107), Expect = 7.828e-106
Identity = 20/45 (44.44%), Postives = 31/45 (68.89%), Query Frame = 2

Query:  866 RKKPGMNNGSSWVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            + KP  ++   WVG FIG  +AAFYHQ++ +A+  K+LGS ++ A
Sbjct:  239 KSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKSLGSFRSAA 283

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP28_ARATH (Probable aquaporin PIP2-8 OS=Arabidopsis thaliana GN=PIP2-8 PE=1 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 1.142e-105
Identity = 171/218 (78.44%), Postives = 181/218 (83.03%), Query Frame = 3

Query:  189 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            KDY DPPPAPL+D  EL  WSFYRA+IAEFIA            IG+K+QT P      CGGVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL RA+ YMVAQCLGAICG G VKAF  + Y R GGGAN +ADGY+ GT LGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF
Sbjct:   13 KDYVDPPPAPLLDMAELKLWSFYRAIIAEFIATLLFLYVTVATVIGHKNQTGP------CGGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLPRAVAYMVAQCLGAICGVGLVKAFMMTPYKRLGGGANTVADGYSTGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 224

HSP 2 Score: 45.8246 bits (107), Expect = 1.142e-105
Identity = 20/33 (60.61%), Postives = 24/33 (72.73%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNN 997
            WVG F+G   AA YHQYI +A AIKAL S ++N
Sbjct:  243 WVGPFVGALAAAAYHQYILRAAAIKALASFRSN 275

HSP 3 Score: 41.2022 bits (95), Expect = 1.142e-105
Identity = 16/19 (84.21%), Postives = 17/19 (89.47%), Query Frame = 1

Query:  841 FGAAVIYNKEKAWDEQWIF 897
            FGAAVIYN EKAWD+ WIF
Sbjct:  224 FGAAVIYNNEKAWDDHWIF 242

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 353.984 bits (907), Expect = 4.294e-105
Identity = 178/238 (74.79%), Postives = 193/238 (81.09%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            MGK+V+V+          A+DY DPPPAPL+D +ELGKWS YRA+IAEF+A            IGYK QTD  +N     CGGVG+LGIAWAFGGMIFILVYCTAG+SGGHINPAVT GLFL RKVSL+RALLYM AQCLGAICG   VK FQ S Y+RYGGGANELA GY+ GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS
Sbjct:    1 MGKEVDVSTLEAG----GARDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQSSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 234

HSP 2 Score: 37.7354 bits (86), Expect = 4.294e-105
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            WVG FIG  +AA YHQ I +A+A +  GS ++NA
Sbjct:  254 WVGPFIGAAIAALYHQVILRASA-RGYGSFRSNA 286

HSP 3 Score: 34.6538 bits (78), Expect = 4.294e-105
Identity = 12/18 (66.67%), Postives = 14/18 (77.78%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            G AV+YN  KAW +QWIF
Sbjct:  236 GVAVVYNNNKAWSDQWIF 253

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 3.578e-104
Identity = 165/218 (75.69%), Postives = 178/218 (81.65%), Query Frame = 3

Query:  189 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            KDY DPPPAP  D  EL  WSF+RA IAEFIA            IGYK +TDP      C  VG+LGIAW+FGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVSL+RAL+YM+AQC GAICG G VKAF K  YN++GGGAN +A GYNKGT  GAE+IGTFVLVYTVFSATDPKRSARDSHVP+LAPLPIGFAVFMVHLATIPITGTGINPARSF
Sbjct:   17 KDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFLYITVATVIGYKKETDP------CASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSF 228

HSP 2 Score: 47.7506 bits (112), Expect = 3.578e-104
Identity = 20/33 (60.61%), Postives = 25/33 (75.76%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNN 997
            WVG F+G   AA YHQY+ +A AIKALGS ++N
Sbjct:  247 WVGPFVGALAAAAYHQYVLRAAAIKALGSFRSN 279

HSP 3 Score: 38.891 bits (89), Expect = 3.578e-104
Identity = 14/19 (73.68%), Postives = 17/19 (89.47%), Query Frame = 1

Query:  841 FGAAVIYNKEKAWDEQWIF 897
            FGAAVIYNK++ WD+ WIF
Sbjct:  228 FGAAVIYNKKRVWDDHWIF 246

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 5.062e-103
Identity = 176/238 (73.95%), Postives = 190/238 (79.83%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            MGK+V+V+           +DY DPPPAPLID +ELGKWS YRAVIAEF+A            IGYK QTD + +     C GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFL RKVSL+RALLYM AQ LGAICG   VK FQ  +Y RYGGGANE++ GY+ GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS
Sbjct:    1 MGKEVDVSTLEAGGVR--DRDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQSGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 236

HSP 2 Score: 37.3502 bits (85), Expect = 5.062e-103
Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            WVG FIG  +AA YHQ + +A+A +  GS ++NA
Sbjct:  256 WVGPFIGAAIAALYHQIVLRASA-RGYGSFRSNA 288

HSP 3 Score: 36.1946 bits (82), Expect = 5.062e-103
Identity = 13/18 (72.22%), Postives = 15/18 (83.33%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAAV+YN  KAW +QWIF
Sbjct:  238 GAAVVYNNSKAWSDQWIF 255

The following BLAST results are available for this feature:

BLAST of DY262808 vs. ExPASy Swiss-Prot

BLAST of DY262808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153


Match Name	E-value	Identity	Description
PIP22_MAIZE	2.465e-107	74.58	Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1	[more]
PIP22_ARATH	2.466e-107	77.64	Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2...	[more]
PIP25_ORYSJ	1.051e-106	73.95	Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G...	[more]
PIP25_MAIZE	2.327e-106	75.21	Aquaporin PIP2-5 OS=Zea mays GN=PIP2-5 PE=1 SV=1	[more]
PIP26_ARATH	3.033e-106	76.36	Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ...	[more]
PIP23_ARATH	7.828e-106	74.49	Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3...	[more]
PIP28_ARATH	1.142e-105	78.44	Probable aquaporin PIP2-8 OS=Arabidopsis thaliana ...	[more]
PIP24_ORYSJ	4.294e-105	74.79	Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G...	[more]
PIP1_ATRCA	3.578e-104	75.69	Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1	[more]
PIP26_MAIZE	5.062e-103	73.95	Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	IC0AAA10AA10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY262808 ID=DY262808; Name=DY262808; organism=Citrus clementina; type=EST; length=1331bp
CACTTAATAAATAGGCCACTCTCTACATCCTTCCCCATTCACCCATCATT
AAACTCTGTAGCAAACACAACAGTCGTAGCTCTTGTTTCTCCCTCTCGTT
TAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATGTTGAAG
TTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGACTACCAC
GACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTC
TTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTT
ATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATCCCAAC
TTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGC
CTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTATTTCTG
GTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGGCGCAAG
GTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTGGGTGC
AATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTACAACA
GGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGGGCACC
GGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACTGTTTT
CTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCT
TGGCACCACTCCCCATTGGGTTTGCTGTGTTCATGGTTCACTTGGCCACC
ATCCCCATCACCGGAACCGGCATCAACCCAGCTAGGAGTTTTTGGAGCTG
CTGTGATCTACAACAAGGAAAAAGCCTGGGATGAACAATGGATCTTCCTG
GGTTGGAACATTCATTGGAACTTTCGTTGCTGCATTCTACCACCAATACA
TTCCTCAGGCAACAGCCATTAAGGCTCTTGGATCCCTTCAGAACAATGCT
TAACCCTTAAAATTGATGTCGGGTGGCTTCCAGGTGAAAAATTTACGCCA
GAATCAGAAATGAAGTTTCTTTTTCAAAGCCCTTTAAAAAAAACCCTTTT
TAGCCCTTTTAAAGGGCCTTTTAAATTTAGGCGAAATTTAAAGGGCTTTT
GAAAATTGTAAAATTTTTAAAATTTTAGGCCTTTTTTTCGCCACCTCCTT
TTACCTATTGGTGGAAGGGGGGGAAATTTGTTGGTTACCCCATTTTTTAA
TTTTTTTTTTTTTCTGGGGGGTGTTTGTTTTTAATGAGAGGGGGGGGGGG
GGTGGGGGTGTGTTTTTTATATATAAAAAAA