DY262808

Overview
NameDY262808
Unique NameDY262808
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1331
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: MIP_HUMAN (Lens fiber major intrinsic protein OS=Homo sapiens GN=MIP PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.436e-19
Identity = 69/203 (33.99%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  234 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  YM AQ LGA+ G   + +       R     N L    + G     EI  T   V  +F+  D +R+ +   V     L +GF++ + HL  +  TG G+NPARSF
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGSSLRWAP-------GPLHVLQVAMAFGLALATLVQSVGHISGAHVNPAVTFAFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPAVSVGQATTVEIFLTLQFVLCIFATYDERRNGQLGSV----ALAVGFSLALGHLFGMYYTGAGMNPARSF 189          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.436e-19
Identity = 70/203 (34.48%), Postives = 97/203 (47.78%), Query Frame = 3
Query:  234 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA  YM AQ LGA+ G   + +       R     N L  G +       EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSF 189          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.794e-19
Identity = 61/162 (37.65%), Postives = 85/162 (52.47%), Query Frame = 3
Query:  372 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYG---GGANELA-DGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            G+G LG+A AFG  +  + Y   GISGGH NPAV+  L +  ++     + Y VAQ LGAI      +V A  K  ++  G    G  EL+  GY+   GL  EII T   +  +  +T     A        AP+ IGF + ++HL +IP+T T +NPARS
Sbjct:   33 GIGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLIHLVSIPVTNTSVNPARS 188          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQPZ1_RHIME (Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 5.794e-19
Identity = 57/163 (34.97%), Postives = 88/163 (53.99%), Query Frame = 3
Query:  372 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYGGGANELAD----GYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARS 839
            G+G+LG+++AFG  +  + Y   GISGGH NPAV+ GL +  ++     + Y++AQ  GAI      +V A  K+ +   G  AN   +    GY+    L  E++ T   +  +  +T        S VPV  AP+ IG  + ++HL +IP+T T +NPARS
Sbjct:   33 GIGLLGVSFAFGLTVLTMAYAVGGISGGHFNPAVSVGLAVAGRMPPASLVGYILAQVTGAIAAAAVLYVIASGKADFQLGGFAANGYGEHSPGGYSLTAALVTEVVMTAFFLLIILGST-------HSRVPVGFAPIAIGLGLTLIHLVSIPVTNTSVNPARS 188          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.883e-19
Identity = 61/163 (37.42%), Postives = 86/163 (52.76%), Query Frame = 3
Query:  372 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCG--FVKAFQKSYYNRYGGGANELAD----GYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPV-LAPLPIGFAVFMVHLATIPITGTGINPARS 839
            G+G LG+A+AFG  +  + Y   GISGGH NPAV+ GL +  K      + Y+VAQ LGA+      +V    K+     G  AN   +    GY+  + L  EII T   +  +  +T          VPV  AP+ IG A+ ++HL +IP+T T +NPARS
Sbjct:   33 GIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLVVILGST-------HGRVPVGFAPVAIGLALTLIHLISIPVTNTSVNPARS 188          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQPZ_PHOLL (Aquaporin Z OS=Photorhabdus luminescens subsp. laumondii GN=aqpZ PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.291e-18
Identity = 51/164 (31.10%), Postives = 82/164 (50.00%), Query Frame = 3
Query:  372 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYN--------RYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            G+G +G++ AFG  +  ++Y    ISGGH NPAVT GL+ G +   +  + Y+++Q +G I     +                    G       G++  + + AEI+ T + +  +  ATD +        P  APL IG A+ +++L +IPIT T +NPARS
Sbjct:   33 GIGFVGVSLAFGLTVLTMIYAVGHISGGHFNPAVTIGLWAGGRFRAVEVIPYIISQVIGGILAAAVLYVIASGQVGFDATTSGFASNGFGEHSPGGFSLQSAIVAEIVLTAIFLIVIIGATDRRAP------PGFAPLAIGLALVLINLISIPITNTSVNPARS 190          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQPZ_CHRVO (Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.291e-18
Identity = 60/169 (35.50%), Postives = 84/169 (49.70%), Query Frame = 3
Query:  372 GVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAIC-----------GCGF--VKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            G+G  G+A AFG  +  + Y    ISG H+NPAV+ GL+ G +    +   Y+VAQ LGAI            G GF   K F  + Y  +  G      GY+    L  E++ T   +  +  ATD +  A        APL IG A+ ++HL +IP+T T +NPARS
Sbjct:   32 GIGFAGVALAFGLTVVTMAYAIGHISGCHLNPAVSIGLWAGGRFPAGQLAPYIVAQVLGAIAAGAVLYVIASGGAGFDVAKGFASNGYAEHSPG------GYSLLAALVCEVVMTMFFLLVIMGATDKRAPAG------FAPLAIGLALTLIHLISIPVTNTSVNPARS 188          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.202e-18
Identity = 70/198 (35.35%), Postives = 96/198 (48.48%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANEL--ADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            +A +AEFI+            + +   T     T      G++  A A    +F+ V   A ISGGH+NPAVTFG F+G  ++L R LLY +AQ LG+   C F+  F        GG A       G +    L  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA SF
Sbjct:   21 KAALAEFISTLIFVFAGQGSGMAFSKLTGGGATTP----AGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVAC-FLLRFST------GGLATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSF 203          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.876e-18
Identity = 71/198 (35.86%), Postives = 95/198 (47.98%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANEL--ADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            +A  AEFI+            + +   T     T      G++  A A    +F+ V   A ISGGH+NPAVTFG F+G  ++L R LLY VAQ LG+   C F+  F        GG A       G +    L  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    L      G  +NPA SF
Sbjct:   21 KAAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTP----AGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVAC-FLLRFST------GGQATGTFGLTGVSVWEALVLEIVMTFGLVYTVYATAVDPKKGS----LGTIAPIAIGFIVGANILVGGAFDGASMNPAVSF 203          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.756e-18
Identity = 70/202 (34.65%), Postives = 94/202 (46.53%), Query Frame = 3
Query:  234 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            EL   +F RAV+AEF+A            + +  Q  P+          +L IA AFG  I  LV     +SG HINPAVT    +G  VS +RA+ Y+ AQ LGA+ G   +         R     N L +    G  +  E+  T  LV  +F +TD +R  +  H      L IGF+V + HL  I  TG  +NPARS
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSALNWP-QALPS----------VLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALLHEITPPAI-RGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKRRGKQLGH----PALSIGFSVALGHLLGIHYTGCSMNPARS 188          
The following BLAST results are available for this feature:
BLAST of DY262808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
MIP_HUMAN4.436e-1933.99Lens fiber major intrinsic protein OS=Homo sapiens... [more]
MIP_CAVPO4.436e-1934.48Lens fiber major intrinsic protein OS=Cavia porcel... [more]
AQPZ_BRUSU5.794e-1937.65Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
AQPZ1_RHIME5.794e-1934.97Aquaporin Z 1 OS=Rhizobium meliloti GN=aqpZ1 PE=3 ... [more]
AQPZ1_AGRT59.883e-1937.42Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]
AQPZ_PHOLL1.291e-1831.10Aquaporin Z OS=Photorhabdus luminescens subsp. lau... [more]
AQPZ_CHRVO1.291e-1835.50Aquaporin Z OS=Chromobacterium violaceum GN=aqpZ P... [more]
TIP11_ORYSJ2.202e-1835.35Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP11_MAIZE2.876e-1835.86Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
AQP2_SHEEP3.756e-1834.65Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AA10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262808 ID=DY262808; Name=DY262808; organism=Citrus clementina; type=EST; length=1331bp
CACTTAATAAATAGGCCACTCTCTACATCCTTCCCCATTCACCCATCATT
AAACTCTGTAGCAAACACAACAGTCGTAGCTCTTGTTTCTCCCTCTCGTT
TAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATGTTGAAG
TTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGACTACCAC
GACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTC
TTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTT
ATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATCCCAAC
TTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGC
CTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTATTTCTG
GTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGGCGCAAG
GTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTGGGTGC
AATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTACAACA
GGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGGGCACC
GGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACTGTTTT
CTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCT
TGGCACCACTCCCCATTGGGTTTGCTGTGTTCATGGTTCACTTGGCCACC
ATCCCCATCACCGGAACCGGCATCAACCCAGCTAGGAGTTTTTGGAGCTG
CTGTGATCTACAACAAGGAAAAAGCCTGGGATGAACAATGGATCTTCCTG
GGTTGGAACATTCATTGGAACTTTCGTTGCTGCATTCTACCACCAATACA
TTCCTCAGGCAACAGCCATTAAGGCTCTTGGATCCCTTCAGAACAATGCT
TAACCCTTAAAATTGATGTCGGGTGGCTTCCAGGTGAAAAATTTACGCCA
GAATCAGAAATGAAGTTTCTTTTTCAAAGCCCTTTAAAAAAAACCCTTTT
TAGCCCTTTTAAAGGGCCTTTTAAATTTAGGCGAAATTTAAAGGGCTTTT
GAAAATTGTAAAATTTTTAAAATTTTAGGCCTTTTTTTCGCCACCTCCTT
TTACCTATTGGTGGAAGGGGGGGAAATTTGTTGGTTACCCCATTTTTTAA
TTTTTTTTTTTTTCTGGGGGGTGTTTGTTTTTAATGAGAGGGGGGGGGGG
GGTGGGGGTGTGTTTTTTATATATAAAAAAA
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