DY262808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQPA_DICDI (Aquaporin A OS=Dictyostelium discoideum GN=aqpA PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.547e-11 Identity = 46/144 (31.94%), Postives = 69/144 (47.92%), Query Frame = 3 Query: 405 GGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPAR 836 G + L++ +G+SG ++NPAVT L +V LI +L Y+ AQ LG I G G + + Y R G LA G N G E++ T +L V + + D + +AP IG A+F+ +G +NP R Sbjct: 77 GMALAALIWAVSGVSGCNLNPAVTLANLLSGRVGLIDSLYYVAAQILGCIAGAGILYGCLPNMY-RIDLGVPHLAPGMNTGQAFLMEMMLTSILCLCVLGTS--VFNVWDRRLNRIAPFAIGLALFIGVAIGFNFSGGALNPVR 217 HSP 2 Score: 21.9422 bits (45), Expect = 3.547e-11 Identity = 7/20 (35.00%), Postives = 13/20 (65.00%), Query Frame = 2 Query: 899 WVGTFIGTFVAAFYHQYIPQ 958 W+G +G +AAF ++ + Q Sbjct: 235 WLGPIVGAILAAFIYRCLLQ 254
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.808e-11 Identity = 50/142 (35.21%), Postives = 70/142 (49.30%), Query Frame = 3 Query: 426 VYCTAG--ISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842 V TAG +SGGH+NPAVT G+ + ++ +RALLY+ AQ L + C ++ + L G GL E+I TF L++ ++ DP+ S V + PL G V LA TG +NPARSF Sbjct: 77 VLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVT----PVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDPR-----SQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSF 209
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQPM_METTH (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum GN=aqpM PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.906e-11 Identity = 54/165 (32.73%), Postives = 78/165 (47.27%), Query Frame = 3 Query: 372 GVGILG-------IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLG-AICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842 G+G+LG I AFG I +Y ISG HINPAVT GL+ +K + Y++AQ LG A F++ + G GA G + AE +GTF+L+ T+ +R+ + A + IG V + ITG+ +NPAR+F Sbjct: 45 GIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPKG-----FAGIIIGLTVAGIITTIGNITGSSLNPARTF 204 The following BLAST results are available for this feature:
BLAST of DY262808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262808 ID=DY262808; Name=DY262808; organism=Citrus clementina; type=EST; length=1331bpback to top |