DY262808 | Citrus Genome Database

Overview


Name	DY262808
Unique Name	DY262808
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1331

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 360.147 bits (923), Expect = 2.285e-102
Identity = 183/250 (73.20%), Postives = 198/250 (79.20%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQ--CGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFWSCCDLQQGKS 875
            M KD+E A        + AKDY DPPPAPLID EEL KWS YRAVIAEF+A            IGYK Q+DP  N     C GVGILGIAWAFGGMIFILVYCTAG+SGGHINPAVTFGLFL RKVSL+RA+LY+VAQ LGAICG G VK FQ ++Y RYGGGANEL+DGY+KGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS  +     Q K+
Sbjct:    1 MAKDIEAAAAAEGGE-YMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSAFYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNQHKA 249

HSP 2 Score: 35.4242 bits (80), Expect = 2.285e-102
Identity = 17/29 (58.62%), Postives = 21/29 (72.41%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGS 985
            WVG  IG  +AA YHQY+ +A+A K LGS
Sbjct:  257 WVGPLIGAAIAAAYHQYVLRASAAK-LGS 284

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 327.405 bits (838), Expect = 3.940e-96
Identity = 167/229 (72.93%), Postives = 179/229 (78.17%), Query Frame = 3

Query:  189 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFWSCCDLQQGKS 875
            KDY DPPPAPL D  EL  WSFYRA+IAEFIA            IGYK Q+    + DQCGGVG LGIAWAFGGMIFILVYCTAGISGGHINPAVTFGL L RKVS+IRA++Y+VAQCLG I G G VK   K  YN  GGGAN +A GY+ GT LGAEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS  +     Q K+
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQS----SADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSIGAAVIYNQKKA 239

HSP 2 Score: 47.3654 bits (111), Expect = 3.940e-96
Identity = 23/44 (52.27%), Postives = 29/44 (65.91%), Query Frame = 2

Query:  866 RKKPGMNNGSSWVGTFIGTFVAAFYHQYIPQATAIKALGSLQNN 997
            +KK   ++   W G FIG   AA YHQYI +A AIKALGS ++N
Sbjct:  236 QKKAWDDHWIFWAGPFIGALAAAAYHQYILRAAAIKALGSFRSN 279

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.863e-90
Identity = 157/217 (72.35%), Postives = 169/217 (77.88%), Query Frame = 3

Query:  189 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            KDY +PPPAPL +  EL  WSFYRA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ YM+ QCLGAICG G VK FQ + Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS
Sbjct:   30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRA--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 240

HSP 2 Score: 35.8094 bits (81), Expect = 3.863e-90
Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAA+IYNK+ +WD+ WIF
Sbjct:  242 GAAIIYNKDHSWDDHWIF 259

HSP 3 Score: 31.9574 bits (71), Expect = 3.863e-90
Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKA 976
            WVG FIG  +AA YHQ + +A   K+
Sbjct:  260 WVGPFIGAALAALYHQIVIRAIPFKS 285

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 1.114e-89
Identity = 156/218 (71.56%), Postives = 168/218 (77.06%), Query Frame = 3

Query:  186 AKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            +KDY +PPPAP  +  EL  WSFYRA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEI+GTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS
Sbjct:   29 SKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFLYVTVLTVMGVKRA--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 240

HSP 2 Score: 36.965 bits (84), Expect = 1.114e-89
Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAA+IYNK+ AWD+ WIF
Sbjct:  242 GAAIIYNKDHAWDDHWIF 259

HSP 3 Score: 31.9574 bits (71), Expect = 1.114e-89
Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKA 976
            WVG FIG  +AA YHQ + +A   K+
Sbjct:  260 WVGPFIGAALAALYHQIVIRAIPFKS 285

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 1.114e-89
Identity = 156/217 (71.89%), Postives = 168/217 (77.42%), Query Frame = 3

Query:  189 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            KDY +PPPAP  +  EL  WSFYRA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y+V QCLGAICG G VK FQ + Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS
Sbjct:   29 KDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFLYITVLTVMGVKRA--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 239

HSP 2 Score: 36.965 bits (84), Expect = 1.114e-89
Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAA+IYNK+ AWD+ WIF
Sbjct:  241 GAAIIYNKDHAWDDHWIF 258

HSP 3 Score: 31.9574 bits (71), Expect = 1.114e-89
Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKA 976
            WVG FIG  +AA YHQ + +A   K+
Sbjct:  259 WVGPFIGAALAALYHQLVIRAIPFKS 284

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 306.99 bits (785), Expect = 3.210e-89
Identity = 155/227 (68.28%), Postives = 171/227 (75.33%), Query Frame = 3

Query:  189 KDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFWSCCDLQQG 869
            KDY +PPPAPL +  EL  WSFYRA IAEF+A            +G       N +T +C  VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL YMV QCLGAICG G VK FQK  Y   GGGAN +A GY KG GLGAEI+GTF+LVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS  +     +G
Sbjct:   31 KDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGV------NNSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRG 251

HSP 2 Score: 34.2686 bits (77), Expect = 3.210e-89
Identity = 12/18 (66.67%), Postives = 15/18 (83.33%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAA+IYN+  AWD+ WIF
Sbjct:  243 GAAIIYNRGHAWDDHWIF 260

HSP 3 Score: 31.9574 bits (71), Expect = 3.210e-89
Identity = 13/26 (50.00%), Postives = 17/26 (65.38%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKA 976
            WVG FIG  +AA YHQ + +A   K+
Sbjct:  261 WVGPFIGAALAAIYHQVVIRAIPFKS 286

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.048e-88
Identity = 156/219 (71.23%), Postives = 169/219 (77.17%), Query Frame = 3

Query:  183 SAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            S KDY +PPPAPL +  EL  WSF+RA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RA+ Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS
Sbjct:   27 SDKDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFLYITVLTVMGVKRS--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 239

HSP 2 Score: 35.4242 bits (80), Expect = 2.048e-88
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAA+I+NK+ AWD+ W+F
Sbjct:  241 GAAIIFNKDNAWDDHWVF 258

HSP 3 Score: 29.261 bits (64), Expect = 2.048e-88
Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKA 976
            WVG FIG  +AA YH  + +A   K+
Sbjct:  259 WVGPFIGAALAALYHVIVIRAIPFKS 284

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.476e-88
Identity = 156/219 (71.23%), Postives = 168/219 (76.71%), Query Frame = 3

Query:  183 SAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            S KDY +PPPAP  +  EL  WSF+RA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS
Sbjct:   27 SDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRS--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 239

HSP 2 Score: 35.4242 bits (80), Expect = 3.476e-88
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAA+IYNK+ +WD+ W+F
Sbjct:  241 GAAIIYNKDHSWDDHWVF 258

HSP 3 Score: 29.261 bits (64), Expect = 3.476e-88
Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKA 976
            WVG FIG  +AA YH  + +A   K+
Sbjct:  259 WVGPFIGAALAALYHVVVIRAIPFKS 284

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.476e-88
Identity = 156/219 (71.23%), Postives = 168/219 (76.71%), Query Frame = 3

Query:  183 SAKDYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            S KDY +PPPAP  +  EL  WSF+RA IAEFIA            +G K    PN+    C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFL RK+SL RAL Y+V QCLGAICG G VK FQ   Y   GGGAN +A GY KG+GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+VHLATIPITGTGINPARS
Sbjct:   27 SDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFLYITVLTVMGVKRS--PNM----CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARS 239

HSP 2 Score: 35.4242 bits (80), Expect = 3.476e-88
Identity = 11/18 (61.11%), Postives = 16/18 (88.89%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAA+IYNK+ +WD+ W+F
Sbjct:  241 GAAIIYNKDHSWDDHWVF 258

HSP 3 Score: 29.261 bits (64), Expect = 3.476e-88
Identity = 12/26 (46.15%), Postives = 16/26 (61.54%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKA 976
            WVG FIG  +AA YH  + +A   K+
Sbjct:  259 WVGPFIGAALAALYHVVVIRAIPFKS 284

[Close]

BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 1.002e-87
Identity = 151/237 (63.71%), Postives = 173/237 (73.00%), Query Frame = 3

Query:  132 MGKDVEVAXXXXXXXXFSAK-DYHDPPPAPLIDFEELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 839
            M    EVA         +AK  Y DPPPAPL+D  ELGKWS YRA+IAEF+A            IGYK+Q       D C GVG LG+AW+FG  IF+LVYCT G+SGGHINPAVT GLF GRK+SL+R +LY+VAQCLGAI G G VK   K  Y+  GGGAN ++DGY+    LGAEI+GTF+LVYTVFSATDPKR+ARDS +PVL PLPIGFAVF+VHLATIPITGTGINPARS
Sbjct:    1 MASKEEVAVETVEGGAAAAKAPYWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQ---RATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVVHLATIPITGTGINPARS 234

HSP 2 Score: 35.4242 bits (80), Expect = 1.002e-87
Identity = 15/34 (44.12%), Postives = 22/34 (64.71%), Query Frame = 2

Query:  899 WVGTFIGTFVAAFYHQYIPQATAIKALGSLQNNA 1000
            WVG  IG F+AA YH+ + +  A KAL S ++ +
Sbjct:  254 WVGPVIGAFLAAAYHKLVLRGEAAKALSSFRSTS 287

HSP 3 Score: 31.5722 bits (70), Expect = 1.002e-87
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 1

Query:  844 GAAVIYNKEKAWDEQWIF 897
            GAAV+YN+  AW + WIF
Sbjct:  236 GAAVLYNQHAAWKDHWIF 253

The following BLAST results are available for this feature:

BLAST of DY262808 vs. ExPASy Swiss-Prot

BLAST of DY262808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153


Match Name	E-value	Identity	Description
PIP23_ORYSJ	2.285e-102	73.20	Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j...	[more]
PIP26_ORYSJ	3.940e-96	72.93	Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j...	[more]
PIP14_ARATH	3.863e-90	72.35	Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ...	[more]
PIP15_ARATH	1.114e-89	71.56	Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ...	[more]
PIP13_ARATH	1.114e-89	71.89	Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3...	[more]
PIP12_ORYSJ	3.210e-89	68.28	Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j...	[more]
PIP12_ARATH	2.048e-88	71.23	Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2...	[more]
PIP11_VICFA	3.476e-88	71.23	Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1	[more]
PIP11_ARATH	3.476e-88	71.23	Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1...	[more]
PIP27_ORYSJ	1.002e-87	63.71	Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j...	[more]

Pages

Properties


Property Name	Value
Genbank description	IC0AAA10AA10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY262808 ID=DY262808; Name=DY262808; organism=Citrus clementina; type=EST; length=1331bp
CACTTAATAAATAGGCCACTCTCTACATCCTTCCCCATTCACCCATCATT
AAACTCTGTAGCAAACACAACAGTCGTAGCTCTTGTTTCTCCCTCTCGTT
TAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATGTTGAAG
TTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGACTACCAC
GACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTC
TTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTT
ATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATCCCAAC
TTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGC
CTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTATTTCTG
GTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGGCGCAAG
GTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTGGGTGC
AATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTACAACA
GGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGGGCACC
GGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACTGTTTT
CTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCT
TGGCACCACTCCCCATTGGGTTTGCTGTGTTCATGGTTCACTTGGCCACC
ATCCCCATCACCGGAACCGGCATCAACCCAGCTAGGAGTTTTTGGAGCTG
CTGTGATCTACAACAAGGAAAAAGCCTGGGATGAACAATGGATCTTCCTG
GGTTGGAACATTCATTGGAACTTTCGTTGCTGCATTCTACCACCAATACA
TTCCTCAGGCAACAGCCATTAAGGCTCTTGGATCCCTTCAGAACAATGCT
TAACCCTTAAAATTGATGTCGGGTGGCTTCCAGGTGAAAAATTTACGCCA
GAATCAGAAATGAAGTTTCTTTTTCAAAGCCCTTTAAAAAAAACCCTTTT
TAGCCCTTTTAAAGGGCCTTTTAAATTTAGGCGAAATTTAAAGGGCTTTT
GAAAATTGTAAAATTTTTAAAATTTTAGGCCTTTTTTTCGCCACCTCCTT
TTACCTATTGGTGGAAGGGGGGGAAATTTGTTGGTTACCCCATTTTTTAA
TTTTTTTTTTTTTCTGGGGGGTGTTTGTTTTTAATGAGAGGGGGGGGGGG
GGTGGGGGTGTGTTTTTTATATATAAAAAAA