DY262808

Overview
NameDY262808
Unique NameDY262808
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1331
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 4.287e-22
Identity = 69/196 (35.20%), Postives = 102/196 (52.04%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            +A +AEFI+            I Y   T+    T      G++  + A    +F+ V   A ISGGH+NPAVTFG F+G  ++L+R ++Y++AQ LG+I     +     S    +G     L++G   G  L  EI+ TF LVYTV+ +A DPK+     ++ ++AP+ IGF V    L     TG  +NPA SF
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATP----AGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVTASSVPAFG-----LSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKK----GNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSF 203          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 7.313e-22
Identity = 78/209 (37.32%), Postives = 109/209 (52.15%), Query Frame = 3
Query:  231 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTG----LGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            EE+   +  RA +AEFI+            I +   TD    T    G+    +A AFG  +F+ V   A ISGGH+NPAVTFG+ LG  ++L+R +LY +AQ LG++  C F+ +F         GG    A G + G G    L  EI+ TF LVYTV+ +A DPK  +    +  +AP+ IGF V    LA    +G  +NPA +F
Sbjct:   13 EEVYHPNALRAALAEFISTLIFVFAGSGSGIAFNKITDNGATTPS--GLVAAALAHAFG--LFVAVSVGANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAAC-FLLSFAT-------GGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGS----LGTIAPIAIGFIVGANILAGGAFSGASMNPAVAF 205          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.136e-22
Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG---GANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            +A +AEFI+            + +   TD    T      G++  + A    +F+ V   A ISGGH+NPAVTFG F+G  +SL++A++Y VAQ LG++  C  +K          GG   GA  L+ G      +  EI+ TF LVYTV+ +A DPK+      + V+AP+ IGF V    LA     G  +NPA SF
Sbjct:   21 KAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPS----GLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKI-------ATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSF 204          

HSP 2 Score: 22.3274 bits (46), Expect = 9.136e-22
Identity = 8/23 (34.78%), Postives = 13/23 (56.52%), Query Frame = 2
Query:  884 NNGSSWVGTFIGTFVAAFYHQYI 952
            N+   W+G F+G  +AA  +  I
Sbjct:  215 NHWVYWLGPFVGAAIAALIYDII 237          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.551e-22
Identity = 73/206 (35.44%), Postives = 106/206 (51.46%), Query Frame = 3
Query:  231 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSF 842
            +E+   +F++AV AEF+A            + + S               IL I+ AFG  I  L      +SGGHINPA+T  L +G ++SL+RA+ Y+ AQ +GAI G G +  +  +  N  G    N L +    G  +  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSF
Sbjct:    3 KEVCSLAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGIL--YWLAPLNARGNLAVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSF 190          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 9.551e-22
Identity = 73/206 (35.44%), Postives = 107/206 (51.94%), Query Frame = 3
Query:  231 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSF 842
            +E+   +F++AV AEF+A            + + S               IL I+ AFG  I  L      +SGGHINPA+T  L +G ++SL+RA+ Y+ AQ +GAI G G +  +  +  N  G    N L++    G  +  E+I TF L   +FS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSF
Sbjct:    3 KEVCSVAFFKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGIL--YWLAPGNARGNLAVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSF 190          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.187e-21
Identity = 66/163 (40.49%), Postives = 89/163 (54.60%), Query Frame = 3
Query:  357 TDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSA-TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            T+  GG+ ++ +A AF   +F  V     +SGGH+NPAVTFG  +G +V+ IRA+ Y +AQ LGAI  C  ++       N        LA G     GL  EII TF LVY V+S   DPKR +    + ++APL IG  V    L   P +G  +NPAR+F
Sbjct:   60 TNTPGGLILVALAHAFA--LFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTT----NGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGS----LGIIAPLAIGLIVGANILVGGPFSGASMNPARAF 212          

HSP 2 Score: 25.7942 bits (55), Expect = 1.187e-21
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 2
Query:  899 WVGTFIGTFVAAFYHQYI 952
            WVG FIG+ +AA  ++Y+
Sbjct:  228 WVGPFIGSALAALIYEYM 245          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.544e-21
Identity = 70/199 (35.18%), Postives = 101/199 (50.75%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKS---QTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFS-ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            RA +AEF++            +        T  +  T+  GG+ ++ +A A    +F  V     +SGGH+NPAVTF   +G ++S+IRA+ Y VAQ +GAI  C  ++       N        +A G ++  GL  EII TF LVY V+S A DPKR +    + ++APL IG  V    L   P  G  +NPAR+F
Sbjct:   24 RATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALA--LFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLAT----NGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGS----IGIIAPLAIGLIVGANILVGGPFDGASMNPARAF 212          

HSP 2 Score: 25.0238 bits (53), Expect = 1.544e-21
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  884 NNGSSWVGTFIGTFVAAFYHQYI 952
            N+   WVG FIG  +AA  ++Y+
Sbjct:  223 NHWIYWVGPFIGGALAALIYEYM 245          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.629e-21
Identity = 72/196 (36.73%), Postives = 98/196 (50.00%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            +A +AEFIA            I Y   T            G++ IA A    +F+ V   A ISGGH+NPAVTFGL +G  ++++  +LY VAQ LGA   C     F   Y             G ++  G+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSF
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGA----LDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVAC-----FLLQYVTHGQAIPTHGVSGISEIEGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPMAIGFIVGANILAAGPFSGGSMNPARSF 201          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 1.629e-21
Identity = 72/205 (35.12%), Postives = 104/205 (50.73%), Query Frame = 3
Query:  231 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSF 842
            +E+   +F +AV AEF+A            + + S               +L I+ AFG  I  +      +SGGH+NPA+T  L +G ++SL+RA+ Y+VAQ +GAI G   +      Y  R     N L +    G  + AE+I TF L   VFS+TD +R++     PV +P L IG +V + HL  I  TG  +NPARSF
Sbjct:    3 KEVCSAAFLKAVFAEFLATLIFVFFGLGSALKWPSAMP-----------SVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGL-APYNARSNLAVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSF 190          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP21_ORYSJ (Probable aquaporin TIP2-1 OS=Oryza sativa subsp. japonica GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.779e-21
Identity = 74/198 (37.37%), Postives = 101/198 (51.01%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVK--AFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            +A +AEFIA            I Y   T    N       G++ IA A    +F+ V   A ISGGH+NPAVTFGL +G  ++++  L Y +AQ LGA   C  +K     K+       G +EL        G+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSF
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGLFYWIAQLLGASIACLLLKFVTHGKAIPTHGVAGISEL-------EGVVMEIVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSF 201          
The following BLAST results are available for this feature:
BLAST of DY262808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
TIP1_MEDTR4.287e-2235.20Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP12_ARATH7.313e-2237.32Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP12_ORYSJ9.136e-2236.18Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
AQP5_RAT9.551e-2235.44Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1[more]
AQP5_MOUSE9.551e-2235.44Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
TIP31_ARATH1.187e-2140.49Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]
TIP32_ARATH1.544e-2135.18Probable aquaporin TIP3-2 OS=Arabidopsis thaliana ... [more]
TIP23_MAIZE1.629e-2136.73Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2[more]
AQP5_SHEEP1.629e-2135.12Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1[more]
TIP21_ORYSJ2.779e-2137.37Probable aquaporin TIP2-1 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AA10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262808 ID=DY262808; Name=DY262808; organism=Citrus clementina; type=EST; length=1331bp
CACTTAATAAATAGGCCACTCTCTACATCCTTCCCCATTCACCCATCATT
AAACTCTGTAGCAAACACAACAGTCGTAGCTCTTGTTTCTCCCTCTCGTT
TAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATGTTGAAG
TTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGACTACCAC
GACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTC
TTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTT
ATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATCCCAAC
TTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGC
CTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTATTTCTG
GTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGGCGCAAG
GTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTGGGTGC
AATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTACAACA
GGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGGGCACC
GGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACTGTTTT
CTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCT
TGGCACCACTCCCCATTGGGTTTGCTGTGTTCATGGTTCACTTGGCCACC
ATCCCCATCACCGGAACCGGCATCAACCCAGCTAGGAGTTTTTGGAGCTG
CTGTGATCTACAACAAGGAAAAAGCCTGGGATGAACAATGGATCTTCCTG
GGTTGGAACATTCATTGGAACTTTCGTTGCTGCATTCTACCACCAATACA
TTCCTCAGGCAACAGCCATTAAGGCTCTTGGATCCCTTCAGAACAATGCT
TAACCCTTAAAATTGATGTCGGGTGGCTTCCAGGTGAAAAATTTACGCCA
GAATCAGAAATGAAGTTTCTTTTTCAAAGCCCTTTAAAAAAAACCCTTTT
TAGCCCTTTTAAAGGGCCTTTTAAATTTAGGCGAAATTTAAAGGGCTTTT
GAAAATTGTAAAATTTTTAAAATTTTAGGCCTTTTTTTCGCCACCTCCTT
TTACCTATTGGTGGAAGGGGGGGAAATTTGTTGGTTACCCCATTTTTTAA
TTTTTTTTTTTTTCTGGGGGGTGTTTGTTTTTAATGAGAGGGGGGGGGGG
GGTGGGGGTGTGTTTTTTATATATAAAAAAA
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