DY262808

Overview
NameDY262808
Unique NameDY262808
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1331
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.779e-21
Identity = 72/199 (36.18%), Postives = 102/199 (51.26%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG---GANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            +A +AEFI+            + +   TD    T      G++  + A    +F+ V   A ISGGH+NPAVTFG F+G  +SL++AL+Y VAQ LG++  C  +K          GG   GA  L+ G      +  E++ TF LVYTV+ +A DPK+      + V+AP+ IGF V    LA     G  +NPA SF
Sbjct:   21 KAAVAEFISTLIFVFAGSGSGMAFSKLTDGGAATP----AGLIAASLAHALALFVAVSVGANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKI-------ATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKK----GDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSF 204          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.779e-21
Identity = 73/206 (35.44%), Postives = 105/206 (50.97%), Query Frame = 3
Query:  231 EELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAP-LPIGFAVFMVHLATIPITGTGINPARSF 842
            +E+   +F +AV AEF+A            + + S               IL IA AFG  I  L      +SGGHINPA+T  L +G ++SL+RA  Y+ AQ +GAI G G +  +  +  N  G    N L +   +G  +  E+I TF L   +F++TD +R++     PV +P L IG +V + HL  I  TG  +NPARSF
Sbjct:    3 KEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWPSALPT-----------ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGIL--YGVAPLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTS-----PVGSPALSIGLSVTLGHLVGIYFTGCSMNPARSF 190          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP21_MAIZE (Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.629e-21
Identity = 75/199 (37.69%), Postives = 102/199 (51.26%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGC---GFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            +A +AEFIA            I Y   T    N       G++ IA A    +F+ V   A ISGGH+NPAVTFGL +G  ++++  + Y VAQ LGA   C   GFV    K+       G +EL        G+  E++ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSF
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYGQLT----NGGALDPAGLVAIAIAHALALFVGVSVAANISGGHLNPAVTFGLAVGGHITILTGVFYWVAQLLGATVACLLLGFV-THGKAIPTHAVAGISEL-------EGVVFEVVITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSF 201          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP2_TOBAC (Probable aquaporin TIP-type RB7-18C OS=Nicotiana tabacum PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 4.740e-21
Identity = 72/197 (36.55%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            +A +AEFIA            I Y   T D  L+       G++ +A A    +F+ V   A ISGGH+NPAVT GL +G  ++++    Y +AQ LG+   C  +K       N      + +A G N   G+  EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSF
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT----NGLAVPTHGVAAGLNGFQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSF 202          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP1_TOBAC (Probable aquaporin TIP-type RB7-5A OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 6.190e-21
Identity = 72/197 (36.55%), Postives = 101/197 (51.27%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQT-DPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            +A +AEFIA            I Y   T D  L+       G++ +A A    +F+ V   A ISGGH+NPAVT GL +G  ++++    Y +AQ LG+   C  +K       N      + +A G N   G+  EII TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSF
Sbjct:   19 KAYVAEFIATLLFVFAGVGSAIAYNKLTADAALDP-----AGLVAVAVAHAFALFVGVSIAANISGGHLNPAVTLGLAVGGNITILTGFFYWIAQLLGSTVACLLLKYVT----NGLAVPTHGVAAGLNGLQGVVMEIIITFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSF 202          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 102.449 bits (254), Expect = 6.190e-21
Identity = 62/152 (40.79%), Postives = 85/152 (55.92%), Query Frame = 3
Query:  390 IAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGG-GANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            IA+ FG ++  L      +SG HINPAVT GL +   VS+++   Y+V+QC+GAI G   +KA   S     GG G   +A G + G G+  E + TF+LV+ V    D +R    + V   APL IG ++   HLA I  TG  +NPARSF
Sbjct:   57 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS--EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRR----TDVKGSAPLAIGLSITAGHLAAIKYTGASMNPARSF 202          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.485e-21
Identity = 69/200 (34.50%), Postives = 95/200 (47.50%), Query Frame = 3
Query:  258 RAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGAN----ELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            RA I+EFIA            +        +      GG+  + +A A G  + + V     +SGGH+NPAVTFG  +G +VSL+RA+LY  AQ LGA+     ++           GGA      LA G   G  +  E + TF  VY  + +  DPKR     H+  +APL +GF +    LA  P  G G+NPAR F
Sbjct:   28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALG--LAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLAT--------GGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKR----GHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVF 213          

HSP 2 Score: 23.8682 bits (50), Expect = 7.485e-21
Identity = 10/26 (38.46%), Postives = 16/26 (61.54%), Query Frame = 2
Query:  899 WVGTFIGTFVAAFYHQY--IPQATAI 970
            W+G F+G  +A   ++Y  IP A A+
Sbjct:  229 WLGPFLGAGLAGLVYEYLLIPPADAV 254          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.056e-20
Identity = 71/203 (34.98%), Postives = 100/203 (49.26%), Query Frame = 3
Query:  234 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA+ YM AQ LGA+ G   + +   +   R     N L  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF
Sbjct:    3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPAAV-RGNLALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSF 189          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.379e-20
Identity = 70/199 (35.18%), Postives = 100/199 (50.25%), Query Frame = 3
Query:  249 SFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVF-SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            S  +A ++EFIA            + +   T            G++ IA A    +F+ V   A ISGGH+NPAVT GL +G  ++LI    Y +AQCLG+I  C  +  F     N      + ++ G     G+  EI+ TF LVYTV+ +A DPK+ +    +  +AP+ IGF V    LA  P +G  +NPARSF
Sbjct:   16 SSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGA----LDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVAC-LLLVF---VTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPKKGS----LGTIAPIAIGFIVGANILAAGPFSGGSMNPARSF 202          
BLAST of DY262808 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.379e-20
Identity = 72/203 (35.47%), Postives = 100/203 (49.26%), Query Frame = 3
Query:  234 ELGKWSFYRAVIAEFIAXXXXXXXXXXXXIGYKSQTDPNLNTDQCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYMVAQCLGAICGCGFVKAFQKSYYNRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSF 842
            EL   SF+RA+ AEF A            +G   +  P       G + +L +A AFG  +  LV     ISG H+NPAVTF   +G ++SL+RA+ YMVAQ LGA+ G   + +       R     N L  G + G     EI  T   V  +F+  D +R+ R   V     L +GF++ + HL  +  TG G+NPARSF
Sbjct:    3 ELRSASFWRAICAEFFASLFYVFFG----LGASLRWAP-------GPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPAV-RGNLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATYDERRNGRLGSV----ALAVGFSLTLGHLFGMYYTGAGMNPARSF 189          
The following BLAST results are available for this feature:
BLAST of DY262808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
TIP12_MAIZE2.779e-2136.18Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
AQP5_HUMAN2.779e-2135.44Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
TIP21_MAIZE3.629e-2137.69Aquaporin TIP2-1 OS=Zea mays GN=TIP2-1 PE=2 SV=1[more]
TIP2_TOBAC4.740e-2136.55Probable aquaporin TIP-type RB7-18C OS=Nicotiana t... [more]
TIP1_TOBAC6.190e-2136.55Probable aquaporin TIP-type RB7-5A OS=Nicotiana ta... [more]
AQP_ANOGA6.190e-2140.79Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP32_MAIZE7.485e-2134.50Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1[more]
MIP_RABIT1.056e-2034.98Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
TIP23_ARATH1.379e-2035.18Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
MIP_BOVIN1.379e-2035.47Lens fiber major intrinsic protein OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AA10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262808 ID=DY262808; Name=DY262808; organism=Citrus clementina; type=EST; length=1331bp
CACTTAATAAATAGGCCACTCTCTACATCCTTCCCCATTCACCCATCATT
AAACTCTGTAGCAAACACAACAGTCGTAGCTCTTGTTTCTCCCTCTCGTT
TAATTAACAAAACAAAAATAAAAGGGAAAAAATGGGGAAGGATGTTGAAG
TTGCTGAGCAGCAAGGCGGCGGCGGCGAGTTCTCAGCCAAGGACTACCAC
GACCCCCCTCCGGCGCCGCTGATCGATTTCGAGGAGCTGGGCAAGTGGTC
TTTTTACAGAGCTGTAATTGCTGAGTTCATCGCTACGCTTTTGTTTCTTT
ATGTTACCGTCTTGACTGTGATTGGATACAAGAGCCAGACTGATCCCAAC
TTGAATACCGATCAGTGTGGTGGCGTTGGCATTCTTGGCATCGCTTGGGC
CTTTGGTGGCATGATCTTCATTCTCGTTTACTGCACAGCCGGTATTTCTG
GTGGACATATCAACCCGGCTGTGACATTCGGACTGTTCTTGGGGCGCAAG
GTGTCGCTCATCCGAGCTCTTTTGTACATGGTAGCACAGTGCTTGGGTGC
AATCTGTGGTTGTGGGTTTGTGAAGGCTTTCCAAAAATCATACTACAACA
GGTATGGAGGTGGGGCCAATGAGCTAGCTGATGGATACAACAAGGGCACC
GGACTGGGTGCTGAGATCATCGGTACTTTCGTTCTTGTCTACACTGTTTT
CTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCGGTCT
TGGCACCACTCCCCATTGGGTTTGCTGTGTTCATGGTTCACTTGGCCACC
ATCCCCATCACCGGAACCGGCATCAACCCAGCTAGGAGTTTTTGGAGCTG
CTGTGATCTACAACAAGGAAAAAGCCTGGGATGAACAATGGATCTTCCTG
GGTTGGAACATTCATTGGAACTTTCGTTGCTGCATTCTACCACCAATACA
TTCCTCAGGCAACAGCCATTAAGGCTCTTGGATCCCTTCAGAACAATGCT
TAACCCTTAAAATTGATGTCGGGTGGCTTCCAGGTGAAAAATTTACGCCA
GAATCAGAAATGAAGTTTCTTTTTCAAAGCCCTTTAAAAAAAACCCTTTT
TAGCCCTTTTAAAGGGCCTTTTAAATTTAGGCGAAATTTAAAGGGCTTTT
GAAAATTGTAAAATTTTTAAAATTTTAGGCCTTTTTTTCGCCACCTCCTT
TTACCTATTGGTGGAAGGGGGGGAAATTTGTTGGTTACCCCATTTTTTAA
TTTTTTTTTTTTTCTGGGGGGTGTTTGTTTTTAATGAGAGGGGGGGGGGG
GGTGGGGGTGTGTTTTTTATATATAAAAAAA
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