DY262811

Overview
NameDY262811
Unique NameDY262811
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1339
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein dnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 4.901e-42
Identity = 92/206 (44.66%), Postives = 117/206 (56.80%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS-SAYTTNPF----DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LG+ KSAS  EIK AYRKL++QYHPD+NKE GA EKFKEIS AYEVLSD +KRA YDQYG        GGG+   ++   F    D+F+T               G R +  +   +G DL+Y + L+F E++FG + E E+   E C+ C G+GAK G+    CS CGG+G +     TPFG       C  C G G
Sbjct:    2 AKRDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFFGG-----------GGRQQDPNAPRQGSDLQYTMRLKFKEAVFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTG 196          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 4.901e-42
Identity = 97/211 (45.97%), Postives = 113/211 (53.55%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGG---SSAYTTNPF-------DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LGV K+A+  EIK AYRKL++QYHPDVNK P A EKFKEI  AYEVLSDD+KRA YD++G A    T GGG      +    F       D+FET                   RR S   KG D+ Y + L F E+ FG E E E+   ETC+ C G+GAK G+    C  C G GQV     TPFG       CP CGG G
Sbjct:    2 AKRDYYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNETFGGGGFQGGGFDFGGFSGFGGFEDIFETFFGAGP------------RRRASGPRKGADVEYMMTLTFEEAAFGKETEIEIPREETCDTCQGSGAKPGTSPTSCPHCHGSGQVTSEQATPFGRIVNRRTCPVCGGTG 200          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_OCEIH (Chaperone protein dnaJ OS=Oceanobacillus iheyensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 8.360e-42
Identity = 93/204 (45.59%), Postives = 121/204 (59.31%), Query Frame = 3
Query:  324 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKST----VGGGSSAY--TTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            DYY  LG+ KSAS  EIK  YRKLAR+YHPDVNKE  A EKFKE+  AYEVLSDD+KRA YDQ+G +G +S      GGG+  +    + FD+F                 G R+R  +   +G DL+Y ++L+F E++FG E + E+   E+C+ C G+GAK G+K   CS C G GQ+ +   TPFG      VC  C G G
Sbjct:    5 DYYEILGIDKSASQDEIKKNYRKLARKYHPDVNKEADAAEKFKEVKEAYEVLSDDQKRAQYDQFGHSGPQSQGFGGFGGGAQDFGGFGDIFDMFFGG--------------GGRSRDPNAPQQGNDLQYTMILDFEEAVFGKETDIEIPKEESCDTCNGSGAKPGTKPETCSHCHGSGQLNQEQNTPFGRVVNRRVCNYCQGTG 194          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMF (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.092e-41
Identity = 93/206 (45.15%), Postives = 116/206 (56.31%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS-SAYTTNPF----DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LGV KSAS  EIK AYRKL++QYHPD+NKE GA EKFKEIS AYE LSD +KRA YDQYG        GGG+   ++   F    D+F+T               G R +  +   +G DL+Y + L+F E+IFG + E E+   E C+ C G+GAK G+    CS CGG+G +     TPFG       C  C G G
Sbjct:    2 AKRDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFFGG-----------GGRQQDPNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTG 196          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMC (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.092e-41
Identity = 93/206 (45.15%), Postives = 116/206 (56.31%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS-SAYTTNPF----DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LGV KSAS  EIK AYRKL++QYHPD+NKE GA EKFKEIS AYE LSD +KRA YDQYG        GGG+   ++   F    D+F+T               G R +  +   +G DL+Y + L+F E+IFG + E E+   E C+ C G+GAK G+    CS CGG+G +     TPFG       C  C G G
Sbjct:    2 AKRDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFFGG-----------GGRQQDPNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTG 196          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_CLONN (Chaperone protein dnaJ OS=Clostridium novyi (strain NT) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.322e-41
Identity = 91/206 (44.17%), Postives = 116/206 (56.31%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEA----GVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            AS DYY  LG+ K AS  EIK AYRKLA +YHPD N+    A EKFK+I+ AY+VLSD +K+A YDQ+G A    G     GGG  +      D+F++               GF +RRR+   +G DL Y + L F E++FG EKE  ++  E C+ C G+GAK G+  + C  CGG GQV     TP G F   S C  CGG G
Sbjct:    2 ASKDYYEVLGLSKGASDDEIKKAYRKLAMKYHPDRNQGNKEAEEKFKDINEAYQVLSDPQKKANYDQFGSADFNGGGFGGFGGGGFSGMGGFEDIFDSFFGG-----------GFSSRRRNGPERGADLEYTVSLTFEEAVFGVEKEISITRNEKCDTCAGSGAKPGTDSKTCDKCGGTGQVRVQRNTPLGSFVSTSTCDKCGGSG 196          

HSP 2 Score: 26.5646 bits (57), Expect = 1.322e-41
Identity = 13/39 (33.33%), Postives = 17/39 (43.59%), Query Frame = 1
Query:  910 GKGEVISEYCRKCSGERTXXXXXXXXXXXLPGITTGAIL 1026
            G G+VI E C  C G+ T             G+ TG +L
Sbjct:  194 GSGKVIDEPCTTCHGKGTVRKNKKIKINIPAGVDTGNVL 232          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_BACSH (Chaperone protein dnaJ OS=Bacillus sphaericus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 1.322e-41
Identity = 91/199 (45.73%), Postives = 117/199 (58.79%), Query Frame = 3
Query:  324 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPF-DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            DYY  LG+ K     EIK AYRKL++QYHPD+NKEPGA EKFKEI+ AYEVLSDD+K+A YDQ+G     +  GGG        F D+F +               G R +  +   KG+DL+Y + ++F E+IFG E E E+   ETCE C G+GAK G++   CSTC G GQ+ +   TPFG       C +C G G
Sbjct:    5 DYYEVLGLTKD----EIKKAYRKLSKQYHPDLNKEPGADEKFKEIAEAYEVLSDDQKKARYDQFGHEDPNAGFGGGFGGGGFGGFEDIFSSFFGG-----------GGRRQDPNAPRKGDDLQYRMNIKFEEAIFGKETEIEIPKDETCETCHGSGAKPGTQPETCSTCNGAGQINQAVDTPFGRMMNRRSCTTCHGTG 188          

HSP 2 Score: 23.8682 bits (50), Expect = 1.322e-41
Identity = 12/41 (29.27%), Postives = 16/41 (39.02%), Query Frame = 1
Query:  910 GKGEVISEYCRKCSGERTXXXXXXXXXXXLPGITTGAILRV 1032
            G G++I E C  C GE               G+  G  +RV
Sbjct:  186 GTGKIIKEKCSTCRGEGKVQKRKKIKVSIPAGVDDGQQIRV 226          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.432e-41
Identity = 92/201 (45.77%), Postives = 113/201 (56.22%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LGV KSAS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSD+ KRA YDQ+G  G +   G GS  +  + F  FE                G R R  +   KG+DL+Y + + F E++FG +KE  +    TC  C G GAK G+  + CS C G G+V     T  G      VCP C G G
Sbjct:    2 AKRDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGPQG--GFGSQGFGGSDFGGFEDIFSSFFGG-------GSRQRDPNAPRKGDDLQYTMTITFEEAVFGTKKEISIKKDVTCHTCNGDGAKPGTSKKTCSYCNGAGRVSVEQNTILGRVRTEQVCPKCEGSG 193          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAW (Chaperone protein dnaJ OS=Staphylococcus aureus (strain MW2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.432e-41
Identity = 91/201 (45.27%), Postives = 109/201 (54.23%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  KE  +    TCE C G GAK G+  + CS C G G V     T  G      VCP C G G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSG 199          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAT (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.432e-41
Identity = 91/201 (45.27%), Postives = 109/201 (54.23%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  KE  +    TCE C G GAK G+  + CS C G G V     T  G      VCP C G G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSG 199          
The following BLAST results are available for this feature:
BLAST of DY262811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LISW64.901e-4244.66Chaperone protein dnaJ OS=Listeria welshimeri sero... [more]
DNAJ_GEOKA4.901e-4245.97Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNAJ_OCEIH8.360e-4245.59Chaperone protein dnaJ OS=Oceanobacillus iheyensis... [more]
DNAJ_LISMF1.092e-4145.15Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISMC1.092e-4145.15Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_CLONN1.322e-4144.17Chaperone protein dnaJ OS=Clostridium novyi (strai... [more]
DNAJ_BACSH1.322e-4145.73Chaperone protein dnaJ OS=Bacillus sphaericus GN=d... [more]
DNAJ_STAES2.432e-4145.77Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNAJ_STAAW2.432e-4145.27Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAT2.432e-4145.27Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AB01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262811 ID=DY262811; Name=DY262811; organism=Citrus clementina; type=EST; length=1339bp
CAAAAGTCATGACGGAAACAGAACATTTCTACTACTCAGTTTCTTGATTT
CACCCTTAGAGACAATTCATCAAACACTTGGTTTGGCTTGCGATGGTTTC
CACCGCAACGACTCTCACTCTCCTTCCCCATCCTTCTCTCAGCTTCTCCC
ATTCTTCATCTTCTTCGTTCCTAGCTGGTGGGACCCGCCTCAGGTCCCAC
AAGAACTTCGCTGCTTTGACGTTAAGTGCTGATTCTTGTCCTTTTGGAGG
TTCGAAGTTGAATAGTAGTAATGCAAGATCCTCTACGTACCGTTTTGGCC
GTTCGGTGGTTTGTGCTTCTGGGGATTACTACGCCACTCTTGGAGTCCCC
AAGTCTGCCAGTGGCAAAGAGATTAAAGCGGCTTATCGAAAATTAGCTCG
TCAGTACCACCCTGATGTCAACAAGGAACCTGGAGCAACAGAAAAGTTTA
AGGAGATTAGTGCTGCCTATGAGGTGCTATCAGACGATAAAAAGAGGGCT
ATGTACGATCAATATGGTGAAGCTGGAGTCAAAAGCACTGTAGGCGGAGG
ATCAAGTGCTTATACGACTAATCCTTTTGATCTGTTTGAGACGTTCTTTG
GACCAAGTATGGGTGGTTTTCCTGGTATGAACCAAACTGGATTTAGAACA
CGCCGGCGTAGTACTGTTACCAAGGGTGAAGATTTACGTTATGACATTGT
GTTGGAGTTTTCTGAGTCTATCTTTGGGGCTGAAAAAGAATTTGAGCTTT
CCCACTTGGAAACATGTGAAGTTTGTACTGGTACTGGTGCAAAGATGGGC
TCCAAGATGAGGATATGTTCAACTTGTGGTGGCAGGGGTCAAGTTATGAG
AACTGATCAAACTCCGTTTGGCTTGTTTTCGCANGTTTCTGTTTGTCCAA
GTTGTGGTGGGGAAGGGTGAAGTCATTTCTGAGTACTGTCGGAAATGCTC
TGGTGAAAGAACAAAACGTTAAAAGAAAAAAATAAAGTCAAAGTCCCTTC
CTGGAATTACAACAGGAGCAATTCTCCGGGTTTGTGGGGGAAGGGGAACC
CTGGGCCGAAAAGGGGGCCCTCCGGGGGAAATTTTAATTTATATCTTGGA
AGTTAAAAAAAATTCCCGAAAATCCAAAAAAAAGGGAAAAAAACCTTTTT
CCAAAAAATATCAAATCAGTTATCTTTTGTGCCCAATAAGGGGAAAGTTG
GGGGTAAAAGGGAAAAAAAAAAATTGAAAAGGGAAATTTCTGAAAAAAAT
TAAGGGTTTTCCCCCCGTGTGCCAACCTCCCCCCCCACAGGGGTAAGGTG
TGGTTCTGTAACTTTTTCTGGCGTGCAGAAAGAAAAAAA
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