DY262811

Overview
NameDY262811
Unique NameDY262811
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1339
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA2 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.432e-41
Identity = 91/201 (45.27%), Postives = 109/201 (54.23%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  KE  +    TCE C G GAK G+  + CS C G G V     T  G      VCP C G G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSG 199          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA1 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.432e-41
Identity = 91/201 (45.27%), Postives = 109/201 (54.23%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA YDQ+G  G +   G G   +  + F  F                 G R R  +   KG+DL+Y + L F E++FG  KE  +    TCE C G GAK G+  + CS C G G V     T  G      VCP C G G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGRQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSG 199          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_BACLD (Chaperone protein dnaJ OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.432e-41
Identity = 93/204 (45.59%), Postives = 113/204 (55.39%), Query Frame = 3
Query:  324 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPF------DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            DYY  LGV KSAS  EIK AYRKL+++YHPD+NKE GA EKFKE+  AYE LSDD+KRA YDQ+G        GGG   +    F      D+F +               G R R  +   +G DL+Y + L F E+ FG E   E+   ETCE C+G+GAK G+K   CS CGG GQ+     TPFG      VC  C G G
Sbjct:    5 DYYEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRAHYDQFGHTDPNQGFGGG--GFGGGDFGGFGFDDIFSSIFGG-----------GARRRDPNAPRQGADLQYTMTLSFEEAAFGKETTIEIPREETCETCSGSGAKPGTKPETCSHCGGSGQLNMEQSTPFGKVVNRRVCHYCNGTG 195          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOCE (Chaperone protein dnaJ OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.924e-41
Identity = 88/204 (43.14%), Postives = 117/204 (57.35%), Query Frame = 3
Query:  324 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTN-----PFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            DYY  LGV K+AS  E+K AYR LA++YHPDVN  +  A  KFKE++ AYE+LSD +KR+ YDQ+G AG      GG+  ++T+       D+FET               G R++ R    KG D++Y   + F E+ FG E+E  +S +E C  CTG+GAK GS +  C+ C G GQV     TPFG F     C +C GEG
Sbjct:    6 DYYEVLGVDKNASDAELKKAYRNLAKKYHPDVNPGDTTAEAKFKEVNEAYEILSDSQKRSRYDQFGHAGTDPNGFGGAGGFSTDFDFGGIGDIFETFFGGSGF--------GGRSKTRRGPQKGADIKYSTEISFEEAAFGVEREINVSKMEVCSKCTGSGAKPGSNVTTCNHCNGTGQVQIKQNTPFGQFINTKTCDACKGEG 201          

HSP 2 Score: 22.7126 bits (47), Expect = 2.924e-41
Identity = 7/16 (43.75%), Postives = 13/16 (81.25%), Query Frame = 1
Query:  910 GKGEVISEYCRKCSGE 957
            G+G++I+E C  C+G+
Sbjct:  199 GEGKIITEPCPACNGK 214          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMH (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.177e-41
Identity = 92/206 (44.66%), Postives = 115/206 (55.83%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS-SAYTTNPF----DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LG+ KSAS  EIK AYRKL++QYHPD+NKE GA EKFKEIS AYE LSD +KRA YDQYG        GGG+   +    F    D+F+T               G R +  +   +G DL+Y + L+F E+IFG + E E+   E C+ C G+GAK G+    CS CGG+G +     TPFG       C  C G G
Sbjct:    2 AKRDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFGGGGFSGFEDIFDTFFGG-----------GGRQQDPNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTG 196          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_LISIN (Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.177e-41
Identity = 92/206 (44.66%), Postives = 115/206 (55.83%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGS-SAYTTNPF----DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LG+ KSAS  EIK AYRKL++QYHPD+NKE GA EKFKEIS AYE LSD +KRA YDQYG        GGG+   +    F    D+F+T               G R +  +   +G DL+Y + L+F E+IFG + E E+   E C+ C G+GAK G+    CS CGG+G +     TPFG       C  C G G
Sbjct:    2 AKRDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFGGGGFSGFEDIFDTFFGG-----------GGRQQDPNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTG 196          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMO (Chaperone protein dnaJ OS=Listeria monocytogenes GN=dnaJ PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.149e-41
Identity = 92/207 (44.44%), Postives = 115/207 (55.56%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSS--AYTTNPF----DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LG+ KSAS  EIK AYRKL++QYHPD+NKE GA EKFKEIS AYE LSD +KRA YDQYG        GGG +   +    F    D+F+T               G R +  +   +G DL+Y + L+F E+IFG + E E+   E C+ C G+GAK G+    CS CGG+G +     TPFG       C  C G G
Sbjct:    2 AKRDYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGGAGGGFGGGGFSGFEDIFDTFFGG-----------GGRQQDPNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTPEKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTG 197          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHY (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain Y51) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 4.964e-41
Identity = 91/204 (44.61%), Postives = 111/204 (54.41%), Query Frame = 3
Query:  324 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-----GSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            DYY  LGV KSA  +EIK AYRKLARQYHPDVN  +  A EKFKE + AY+VLSD +KRA YDQ G +       G     G      + FD+F                 G   +RR   T+G DLRYD+ + F E+ FG EKE ++   ETC  C G+G+  G+    CS C G GQV  T +TPFG       CP+C G G
Sbjct:    4 DYYEVLGVSKSADEQEIKKAYRKLARQYHPDVNPGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSAFDPNQQGFGGFGGDFGGFGDIFDMF-------------FGGGGGGGQRRQGPTRGNDLRYDLTITFEEAAFGTEKEIQVPRQETCTECHGSGSAPGTHPTTCSQCHGTGQVKATQRTPFGAIQTARTCPACNGSG 194          

HSP 2 Score: 27.335 bits (59), Expect = 4.964e-41
Identity = 14/40 (35.00%), Postives = 18/40 (45.00%), Query Frame = 1
Query:  910 GKGEVISEYCRKCSGERTXXXXXXXXXXXLPGITTGAILR 1029
            G G+ IS  C++CSG+ T            PG   G  LR
Sbjct:  192 GSGQFISSPCKECSGKGTTRKVKTIKVTVPPGSEDGLNLR 231          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_DESHD (Chaperone protein dnaJ OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 4.964e-41
Identity = 91/204 (44.61%), Postives = 111/204 (54.41%), Query Frame = 3
Query:  324 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-----GSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            DYY  LGV KSA  +EIK AYRKLARQYHPDVN  +  A EKFKE + AY+VLSD +KRA YDQ G +       G     G      + FD+F                 G   +RR   T+G DLRYD+ + F E+ FG EKE ++   ETC  C G+G+  G+    CS C G GQV  T +TPFG       CP+C G G
Sbjct:    4 DYYEVLGVSKSADEQEIKKAYRKLARQYHPDVNPGDKDAEEKFKEATEAYDVLSDTEKRARYDQMGHSAFDPNQQGFGGFGGDFGGFGDIFDMF-------------FGGGGGGGQRRQGPTRGNDLRYDLTITFEEAAFGTEKEIQVPRQETCTECHGSGSAPGTHPTTCSQCHGTGQVKATQRTPFGAIQTARTCPACNGSG 194          

HSP 2 Score: 27.335 bits (59), Expect = 4.964e-41
Identity = 14/40 (35.00%), Postives = 18/40 (45.00%), Query Frame = 1
Query:  910 GKGEVISEYCRKCSGERTXXXXXXXXXXXLPGITTGAILR 1029
            G G+ IS  C++CSG+ T            PG   G  LR
Sbjct:  192 GSGQFISSPCKECSGKGTTRKVKTIKVTVPPGSEDGLNLR 231          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_STAEQ (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 7.077e-41
Identity = 91/201 (45.27%), Postives = 112/201 (55.72%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LGV KSAS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSD+ KR  YDQ+G  G +   G GS  +  + F  FE                G R R  +   KG+DL+Y + + F E++FG +KE  +    TC  C G GAK G+  + CS C G G+V     T  G      VCP C G G
Sbjct:    2 AKRDYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNYDQFGHDGPQG--GFGSQGFGGSDFGGFEDIFSSFFGG-------GSRQRDPNAPRKGDDLQYTMTITFEEAVFGTKKEISIKKDVTCHTCNGDGAKPGTSKKTCSYCNGAGRVSVEQNTILGRVRTEQVCPKCEGSG 193          
The following BLAST results are available for this feature:
BLAST of DY262811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_STAA22.432e-4145.27Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA12.432e-4145.27Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_BACLD2.432e-4145.59Chaperone protein dnaJ OS=Bacillus licheniformis (... [more]
DNAJ_CLOCE2.924e-4143.14Chaperone protein dnaJ OS=Clostridium cellulolytic... [more]
DNAJ_LISMH3.177e-4144.66Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISIN3.177e-4144.66Chaperone protein dnaJ OS=Listeria innocua GN=dnaJ... [more]
DNAJ_LISMO4.149e-4144.44Chaperone protein dnaJ OS=Listeria monocytogenes G... [more]
DNAJ_DESHY4.964e-4144.61Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]
DNAJ_DESHD4.964e-4144.61Chaperone protein dnaJ OS=Desulfitobacterium hafni... [more]
DNAJ_STAEQ7.077e-4145.27Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10AB01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262811 ID=DY262811; Name=DY262811; organism=Citrus clementina; type=EST; length=1339bp
CAAAAGTCATGACGGAAACAGAACATTTCTACTACTCAGTTTCTTGATTT
CACCCTTAGAGACAATTCATCAAACACTTGGTTTGGCTTGCGATGGTTTC
CACCGCAACGACTCTCACTCTCCTTCCCCATCCTTCTCTCAGCTTCTCCC
ATTCTTCATCTTCTTCGTTCCTAGCTGGTGGGACCCGCCTCAGGTCCCAC
AAGAACTTCGCTGCTTTGACGTTAAGTGCTGATTCTTGTCCTTTTGGAGG
TTCGAAGTTGAATAGTAGTAATGCAAGATCCTCTACGTACCGTTTTGGCC
GTTCGGTGGTTTGTGCTTCTGGGGATTACTACGCCACTCTTGGAGTCCCC
AAGTCTGCCAGTGGCAAAGAGATTAAAGCGGCTTATCGAAAATTAGCTCG
TCAGTACCACCCTGATGTCAACAAGGAACCTGGAGCAACAGAAAAGTTTA
AGGAGATTAGTGCTGCCTATGAGGTGCTATCAGACGATAAAAAGAGGGCT
ATGTACGATCAATATGGTGAAGCTGGAGTCAAAAGCACTGTAGGCGGAGG
ATCAAGTGCTTATACGACTAATCCTTTTGATCTGTTTGAGACGTTCTTTG
GACCAAGTATGGGTGGTTTTCCTGGTATGAACCAAACTGGATTTAGAACA
CGCCGGCGTAGTACTGTTACCAAGGGTGAAGATTTACGTTATGACATTGT
GTTGGAGTTTTCTGAGTCTATCTTTGGGGCTGAAAAAGAATTTGAGCTTT
CCCACTTGGAAACATGTGAAGTTTGTACTGGTACTGGTGCAAAGATGGGC
TCCAAGATGAGGATATGTTCAACTTGTGGTGGCAGGGGTCAAGTTATGAG
AACTGATCAAACTCCGTTTGGCTTGTTTTCGCANGTTTCTGTTTGTCCAA
GTTGTGGTGGGGAAGGGTGAAGTCATTTCTGAGTACTGTCGGAAATGCTC
TGGTGAAAGAACAAAACGTTAAAAGAAAAAAATAAAGTCAAAGTCCCTTC
CTGGAATTACAACAGGAGCAATTCTCCGGGTTTGTGGGGGAAGGGGAACC
CTGGGCCGAAAAGGGGGCCCTCCGGGGGAAATTTTAATTTATATCTTGGA
AGTTAAAAAAAATTCCCGAAAATCCAAAAAAAAGGGAAAAAAACCTTTTT
CCAAAAAATATCAAATCAGTTATCTTTTGTGCCCAATAAGGGGAAAGTTG
GGGGTAAAAGGGAAAAAAAAAAATTGAAAAGGGAAATTTCTGAAAAAAAT
TAAGGGTTTTCCCCCCGTGTGCCAACCTCCCCCCCCACAGGGGTAAGGTG
TGGTTCTGTAACTTTTTCTGGCGTGCAGAAAGAAAAAAA
back to top