DY262811

Overview
NameDY262811
Unique NameDY262811
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1339
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_CLOTE (Chaperone protein dnaJ OS=Clostridium tetani GN=dnaJ PE=3 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 8.427e-41
Identity = 88/199 (44.22%), Postives = 114/199 (57.29%), Query Frame = 3
Query:  324 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            D+Y  LGV K A+  EIK A+RKLA +YHPD N     A E+FKEI+ AY+VLSD +KRA YDQ+G A       G S     +  D+FE+               G  +RRR+   KG D++Y I L F+E++FG EKE  ++  ETCE CTGTGAK G+  + C  C G GQ+     T  G F  V+ C  CGG+G
Sbjct:    5 DFYEVLGVEKGANDAEIKKAFRKLALKYHPDKNAGNKEAEERFKEINEAYQVLSDPQKRAQYDQFGTADFNGGGAGFSGFEDFDLGDIFESFFGGGFGGF------GGSSRRRNGPQKGPDVQYSINLTFNEAVFGVEKEVSITKSETCETCTGTGAKPGTNSKTCPKCNGSGQIKVQRNTALGSFVSVNTCDMCGGKG 197          

HSP 2 Score: 27.7202 bits (60), Expect = 8.427e-41
Identity = 12/41 (29.27%), Postives = 19/41 (46.34%), Query Frame = 1
Query:  910 GKGEVISEYCRKCSGERTXXXXXXXXXXXLPGITTGAILRV 1032
            GKG +IS+ C  C G+ T             G+ TG ++ +
Sbjct:  195 GKGTIISDPCSDCKGKGTVRKQKKIKVNIPAGVDTGNVIPI 235          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCN (Chaperone protein dnaJ OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.098e-40
Identity = 88/198 (44.44%), Postives = 109/198 (55.05%), Query Frame = 3
Query:  324 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            DYY  LGV KSAS  EIK AYR+LA++YHPDV+KE  A EKFKE+  AYEVLSD++KRA YDQ+G AG     GGG         D+F +               G R R  +   +G DL+Y + LEF E+IFG E   E+   + C+ C G+GAK G+    C  C G GQ+     TPFG       C  C G G
Sbjct:    5 DYYEVLGVSKSASKDEIKKAYRRLAKKYHPDVSKEENAVEKFKEVQEAYEVLSDEQKRAQYDQFGHAGSSQGFGGGDFGGGFGFEDIFSSFFGG-----------GSRRRDPNAPRQGADLQYQVTLEFEEAIFGKELNVEIPVEDPCDTCHGSGAKPGTTKETCKYCSGTGQISVEQNTPFGRIVNRQTCRHCSGTG 191          

HSP 2 Score: 21.9422 bits (45), Expect = 1.098e-40
Identity = 12/41 (29.27%), Postives = 15/41 (36.59%), Query Frame = 1
Query:  910 GKGEVISEYCRKCSGERTXXXXXXXXXXXLPGITTGAILRV 1032
            G G++I E C  C G                GI  G  +RV
Sbjct:  189 GTGQMIKEKCTTCHGTGKVRKRKKINVKIPAGIDNGQQIRV 229          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_HALOH (Chaperone protein dnaJ OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.207e-40
Identity = 90/204 (44.12%), Postives = 111/204 (54.41%), Query Frame = 3
Query:  309 VCASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKE-PGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            +  S DYY  LGV + A  KEIK AYR+LAR+YHPD+NK+ P A EKFKEIS AYE+LSD  KRA YDQYG AG+               F+ F                 G   RRR     G DL+Y + + F ++ FG  K+  +   ETC+ C GTGAK G+  + C  C G GQV  T +TPFG F+    C  CGG G
Sbjct:    1 MATSKDYYEILGVSRDADQKEIKKAYRRLARKYHPDINKDDPDAEEKFKEISEAYEILSDPDKRARYDQYGHAGINEEDFN---------FEDFAQRGFGGFDDIFDMFFGGGMGRRRRGPRPGADLQYRMKIPFEDAAFGTTKKITIPRTETCDTCNGTGAKPGTSPKTCPQCNGSGQVRYTQRTPFGQFAQTRTCDRCGGRG 195          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_THETN (Chaperone protein dnaJ OS=Thermoanaerobacter tengcongensis GN=dnaJ PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.864e-40
Identity = 88/202 (43.56%), Postives = 115/202 (56.93%), Query Frame = 3
Query:  324 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKS--TVGGGSSAYTTNPFDL-FETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            D Y  LGV ++AS +EIK AYR+LA++YHPD+N  +  A +KFKEI+ AYE+LSD +KRA YDQ+G A  +   +  GG   +    FD  F                TG R   +    KG D+RYD+ L F E+ FG EKE E+   E C+VC GTG K GS+   C  C G G++ +T  TPFG    +  CP C GEG
Sbjct:    5 DLYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFEQGGSQQGGFGDFGEGGFDFDFGGFGDIFGDIFSDFFGTGRRKAEKGP-KKGADIRYDLTLTFEEAAFGTEKEIEVERFEVCDVCHGTGVKPGSRPETCPVCHGTGEIRQTQNTPFGRIVNIRTCPRCHGEG 205          

HSP 2 Score: 24.2534 bits (51), Expect = 1.864e-40
Identity = 7/15 (46.67%), Postives = 13/15 (86.67%), Query Frame = 1
Query:  910 GKGEVISEYCRKCSG 954
            G+G++I++ C+KC G
Sbjct:  203 GEGKIITDPCQKCGG 217          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_LACF3 (Chaperone protein dnaJ OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.689e-40
Identity = 89/202 (44.06%), Postives = 113/202 (55.94%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRR-RSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  D Y  LGV K AS  EIK AYRKLA +YHPDVN EPGA +KFK+I+ AYE LSDD+KRA YDQ+G  G ++   GG   +       F                 G R RR  S   +G DL+Y + L+F +++FG E   + +    C  C G+GAK G     CSTC G+G V+R  QT  G+     VCP+CGG+G
Sbjct:    2 AEEDLYDVLGVKKDASEAEIKRAYRKLAAKYHPDVNHEPGAEKKFKKINEAYETLSDDQKRAQYDQFGTTGSQAGGFGGQGGFGGFGQGGFSQGGFGDFSDIFGDIFGGGRARRDPSAPQQGRDLQYTMTLDFMDAVFGKETSIKYNRSAECHTCHGSGAKPGKSAHTCSTCHGQGYVLRQRQTMMGMMQSQEVCPTCGGKG 203          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBP (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.165e-40
Identity = 91/200 (45.50%), Postives = 112/200 (56.00%), Query Frame = 3
Query:  327 YYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPF-DLFETXXXXXXXXXXXXNQTGFRTR-RRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            YY  LGV K AS  EIK+AYRKLA +YHPD NK +  A EKFKE + AYEVL D +KR  YDQ+G+AGV +  GGG  A     F D+F                 G R   RRS   +G DLRY++ +   ++  G E + E+  LETC  CTG+GA  GS   +C  C G GQV RT     G FS  + CP C G+G
Sbjct:    6 YYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKIEIPRLETCVDCTGSGASKGSSPTVCPDCSGTGQVRRTQ----GFFSVTTTCPRCKGKG 201          

HSP 2 Score: 28.4906 bits (62), Expect = 3.165e-40
Identity = 14/41 (34.15%), Postives = 20/41 (48.78%), Query Frame = 1
Query:  910 GKGEVISEYCRKCSGERTXXXXXXXXXXXLPGITTGAILRV 1032
            GKG+VIS  C+ C GE               G+ +G+ L+V
Sbjct:  199 GKGKVISNPCKTCKGEGLTEKRRTIHIKIPAGVESGSRLKV 239          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPBA (Chaperone protein dnaJ OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 3.165e-40
Identity = 91/200 (45.50%), Postives = 112/200 (56.00%), Query Frame = 3
Query:  327 YYATLGVPKSASGKEIKAAYRKLARQYHPDVNK-EPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPF-DLFETXXXXXXXXXXXXNQTGFRTR-RRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            YY  LGV K AS  EIK+AYRKLA +YHPD NK +  A EKFKE + AYEVL D +KR  YDQ+G+AGV +  GGG  A     F D+F                 G R   RRS   +G DLRY++ +   ++  G E + E+  LETC  CTG+GA  GS   +C  C G GQV RT     G FS  + CP C G+G
Sbjct:    6 YYEVLGVSKGASDDEIKSAYRKLAIKYHPDKNKGDKEAEEKFKEATEAYEVLRDPQKRQAYDQFGKAGVNAGAGGGYGAGAYTDFSDIFGDFGDIFSEFFGGGGGGGSRGGGRRSGPQRGSDLRYNLEVSLEDAALGKEYKIEIPRLETCVDCTGSGASKGSSPTVCPDCSGTGQVRRTQ----GFFSVTTTCPRCKGKG 201          

HSP 2 Score: 28.4906 bits (62), Expect = 3.165e-40
Identity = 14/41 (34.15%), Postives = 20/41 (48.78%), Query Frame = 1
Query:  910 GKGEVISEYCRKCSGERTXXXXXXXXXXXLPGITTGAILRV 1032
            GKG+VIS  C+ C GE               G+ +G+ L+V
Sbjct:  199 GKGKVISNPCKTCKGEGLTEKRRTIHIKIPAGVESGSRLKV 239          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_STAS1 (Chaperone protein dnaJ OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.022e-39
Identity = 92/208 (44.23%), Postives = 113/208 (54.33%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGG-GSSAYTTNPF------DLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LGV KSAS  EIK AYRKL++QYHPD+NKE GA EKFKEIS AYEVLSD+ KRA YDQ+G  G +   GG G      + F      D+F +               G + R  +   KG+DL+Y + + F E++FG+EKE  +     C  C G GAK G+K + C  C G G V     T  G      VCP C G G
Sbjct:    2 AKRDYYEVLGVSKSASKDEIKKAYRKLSKQYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGGQGFGGQDFSGFGGGGFEDIFSSFFGG-----------GRQQRDPNAPRKGDDLQYTMTVTFDEAVFGSEKEISIRKDVACHTCDGEGAKPGTKKKTCHYCNGSGHVSVEQNTILGRVRTEKVCPVCSGSG 198          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAU (Chaperone protein dnaJ OS=Staphylococcus aureus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.022e-39
Identity = 89/201 (44.28%), Postives = 107/201 (53.23%), Query Frame = 3
Query:  315 ASGDYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEAGVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            A  DYY  LG+ K AS  EIK AYRKL+++YHPD+NKE GA EKFKEIS AYEVLSDD KRA  DQ+G  G +   G G   +  + F  F                 G   R  +   KG+DL+Y + L F E++FG  KE  +    TCE C G GAK G+  + CS C G G V     T  G      VCP C G G
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRATIDQFGHDGPQ---GFGGQGFNGSDFGGFSGFGGGGFEDIFSSFFGGGSQRDPNAPQKGDDLQYTMTLTFEEAVFGTTKEISIRKDVTCETCHGDGAKPGTSKKTCSYCNGAGHVAVEQNTILGRVRTEQVCPKCNGSG 199          
BLAST of DY262811 vs. ExPASy Swiss-Prot
Match: DNAJ_BACA2 (Chaperone protein dnaJ OS=Bacillus amyloliquefaciens (strain FZB42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 1.022e-39
Identity = 91/202 (45.05%), Postives = 110/202 (54.46%), Query Frame = 3
Query:  324 DYYATLGVPKSASGKEIKAAYRKLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRAMYDQYGEA----GVKSTVGGGSSAYTTNPFDLFETXXXXXXXXXXXXNQTGFRTRRRSTVTKGEDLRYDIVLEFSESIFGAEKEFELSHLETCEVCTGTGAKMGSKMRICSTCGGRGQVMRTDQTPFGLFSXVSVCPSCGGEG 917
            DYY  LGV KSAS  EIK AYRKL+++YHPD+NKE GA EKFKE+  AYE LSDD+KRA YDQ+G      G     GGG         D+F +               G R R  +   +G DL+Y + L F ++ FG E   E+   E CE C G+GAK G+K   CS CGG GQ+     TPFG      VC  C G G
Sbjct:    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYDQFGHTDPNQGFGGGFGGGGDFGGFGFDDIFSSIFGG-----------GTRRRDPNAPRQGADLQYTMTLSFEDAAFGKETIIEIPREENCETCKGSGAKPGTKPDTCSHCGGSGQLNVEQNTPFGKVVNRRVCHHCEGTG 195          
The following BLAST results are available for this feature:
BLAST of DY262811 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_CLOTE8.427e-4144.22Chaperone protein dnaJ OS=Clostridium tetani GN=dn... [more]
DNAJ_BACCN1.098e-4044.44Chaperone protein dnaJ OS=Bacillus cereus subsp. c... [more]
DNAJ_HALOH1.207e-4044.12Chaperone protein dnaJ OS=Halothermothrix orenii (... [more]
DNAJ_THETN1.864e-4043.56Chaperone protein dnaJ OS=Thermoanaerobacter tengc... [more]
DNAJ_LACF32.689e-4044.06Chaperone protein dnaJ OS=Lactobacillus fermentum ... [more]
DNAJ_LEPBP3.165e-4045.50Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_LEPBA3.165e-4045.50Chaperone protein dnaJ OS=Leptospira biflexa serov... [more]
DNAJ_STAS11.022e-3944.23Chaperone protein dnaJ OS=Staphylococcus saprophyt... [more]
DNAJ_STAAU1.022e-3944.28Chaperone protein dnaJ OS=Staphylococcus aureus GN... [more]
DNAJ_BACA21.022e-3945.05Chaperone protein dnaJ OS=Bacillus amyloliquefacie... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AB01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262811 ID=DY262811; Name=DY262811; organism=Citrus clementina; type=EST; length=1339bp
CAAAAGTCATGACGGAAACAGAACATTTCTACTACTCAGTTTCTTGATTT
CACCCTTAGAGACAATTCATCAAACACTTGGTTTGGCTTGCGATGGTTTC
CACCGCAACGACTCTCACTCTCCTTCCCCATCCTTCTCTCAGCTTCTCCC
ATTCTTCATCTTCTTCGTTCCTAGCTGGTGGGACCCGCCTCAGGTCCCAC
AAGAACTTCGCTGCTTTGACGTTAAGTGCTGATTCTTGTCCTTTTGGAGG
TTCGAAGTTGAATAGTAGTAATGCAAGATCCTCTACGTACCGTTTTGGCC
GTTCGGTGGTTTGTGCTTCTGGGGATTACTACGCCACTCTTGGAGTCCCC
AAGTCTGCCAGTGGCAAAGAGATTAAAGCGGCTTATCGAAAATTAGCTCG
TCAGTACCACCCTGATGTCAACAAGGAACCTGGAGCAACAGAAAAGTTTA
AGGAGATTAGTGCTGCCTATGAGGTGCTATCAGACGATAAAAAGAGGGCT
ATGTACGATCAATATGGTGAAGCTGGAGTCAAAAGCACTGTAGGCGGAGG
ATCAAGTGCTTATACGACTAATCCTTTTGATCTGTTTGAGACGTTCTTTG
GACCAAGTATGGGTGGTTTTCCTGGTATGAACCAAACTGGATTTAGAACA
CGCCGGCGTAGTACTGTTACCAAGGGTGAAGATTTACGTTATGACATTGT
GTTGGAGTTTTCTGAGTCTATCTTTGGGGCTGAAAAAGAATTTGAGCTTT
CCCACTTGGAAACATGTGAAGTTTGTACTGGTACTGGTGCAAAGATGGGC
TCCAAGATGAGGATATGTTCAACTTGTGGTGGCAGGGGTCAAGTTATGAG
AACTGATCAAACTCCGTTTGGCTTGTTTTCGCANGTTTCTGTTTGTCCAA
GTTGTGGTGGGGAAGGGTGAAGTCATTTCTGAGTACTGTCGGAAATGCTC
TGGTGAAAGAACAAAACGTTAAAAGAAAAAAATAAAGTCAAAGTCCCTTC
CTGGAATTACAACAGGAGCAATTCTCCGGGTTTGTGGGGGAAGGGGAACC
CTGGGCCGAAAAGGGGGCCCTCCGGGGGAAATTTTAATTTATATCTTGGA
AGTTAAAAAAAATTCCCGAAAATCCAAAAAAAAGGGAAAAAAACCTTTTT
CCAAAAAATATCAAATCAGTTATCTTTTGTGCCCAATAAGGGGAAAGTTG
GGGGTAAAAGGGAAAAAAAAAAATTGAAAAGGGAAATTTCTGAAAAAAAT
TAAGGGTTTTCCCCCCGTGTGCCAACCTCCCCCCCCACAGGGGTAAGGTG
TGGTTCTGTAACTTTTTCTGGCGTGCAGAAAGAAAAAAA
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