DY262827

Overview
NameDY262827
Unique NameDY262827
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1322
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: SPKA_DICDI (Stress-activated protein kinase alpha OS=Dictyostelium discoideum GN=spkA-1 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.797e-12
Identity = 49/170 (28.82%), Postives = 93/170 (54.71%), Query Frame = 2
Query:  284 RTLLHVAASCGHPEVVEILLSVDESANV-VNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASK----GWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSA---LCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVD 769
            ++ L +A    + E+VE+LLS+  +    +N  D+ G++ +H A S  +  ++ +L  +  +V+++ND   T +HY   K       +  +L I +G  +N+++K G T LH+ A   NS    +  LL++ GA V+   +  ++PL  AV    +++  +L++ GADVD
Sbjct:   45 QSALTIALKNNNEEMVELLLSLCVTLKADINTFDKNGFSALHQAVSSDDRILMRVLQYENINVDVQNDDLNTPIHYFCQKFRSPNCQEPFQLFIQKGVNVNAQNKNGETPLHK-AIFNNSVRLMMVGLLLKNGANVNLATQFQESPLHYAVRLGREDLVSVLLKAGADVD 213          
BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: NFKB2_CHICK (Nuclear factor NF-kappa-B p100 subunit OS=Gallus gallus GN=NFKB2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.797e-12
Identity = 46/141 (32.62%), Postives = 77/141 (54.61%), Query Frame = 2
Query:  287 TLLHVAASCGHPEVVEILLSVDESAN--VVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVN-LKNDGGRTALHYAASKGWLKIVELLISR-GAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTP 697
            +LLH+A      E++ +LL+   SA   +++  + +G  P+H A    +   +++L+ KGADVN ++  GGRT LH A     L +   L+ + GA +NS+   G T LH  A  G+  L +LL++ GA+V   +    +P
Sbjct:  547 SLLHLALQAADEEMLRMLLAHLASATPYLLHLPNFQGLLPVHLAVKAKSPACLDLLVRKGADVNGVERQGGRTPLHLAVEMENLNMATHLVKKLGANVNSRTFAGNTPLHLAAGLGSPTLTKLLLKAGADVQRENDEPVSP 687          
BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: FEM1B_XENLA (Protein fem-1 homolog B OS=Xenopus laevis GN=fem1b PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.797e-12
Identity = 56/182 (30.77%), Postives = 89/182 (48.90%), Query Frame = 2
Query:  278 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDK-EGYTVLGRA-SND 817
            D  T L  AA  GH EVV++L+S + + N     +     P+ +A   G + IV  L+   A++++ N    T L  AA KG   +V  L+ + A  N++   G TALH  A  G+  +   L++  A +   +  G TPL  A      +V  LL+ H +D D + + E   +LG + +ND
Sbjct:   89 DGATALWCAAGAGHYEVVKLLVSHEANVNHTTVTNS---TPLRAACFDGRLDIVRFLVENNANISIANKYDNTCLMIAAYKGHSDVVHYLLRQHADPNARAHCGATALHFAAEAGHLDIVRELVKWKAAM-VVNGHGMTPLKVAAESCKADVVELLLAH-SDCDAKSRIEALELLGASFAND 265          
BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: BCL3_HUMAN (B-cell lymphoma 3 protein OS=Homo sapiens GN=BCL3 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.797e-12
Identity = 52/186 (27.96%), Postives = 95/186 (51.08%), Query Frame = 2
Query:  272 NDDDRTLLHVAASCGHPEVVEILLSV-DESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK----INSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATD-KAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRAS 811
            ++D  T LH+A   G+   V  L+++  +    ++  +     P+H A      ++V +L++ GA     +  G+TA H A        +  L+   A     + +++  G TALH   +T      +LL+E GA++DA D K+G++PL++AV   +  +  LL++HGA+V+ +   G + L  AS
Sbjct:  124 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 309          
BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: ASB4_HUMAN (Ankyrin repeat and SOCS box protein 4 OS=Homo sapiens GN=ASB4 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.797e-12
Identity = 56/188 (29.79%), Postives = 91/188 (48.40%), Query Frame = 2
Query:  287 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSK--DKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVIC--------YNKE---VALLLIRHGADVDVEDKEGYTVLGRAS 811
            T LH++   GH E + +LL  + + N        G  P+H A  + NV  V++L  +GA +N  +  G TALH+  +   +   + L+ RGA +N K  ++   T LH  A  G S L    +E GA VD+ +   +TPL  A           Y+ E   V  +L+ + A+V+  D +  + L +A+
Sbjct:   77 TGLHLSVLFGHVECLLVLLDHNATINC----RPNGKTPLHVACEMANVDCVKILCDRGAKLNCYSLSGHTALHFCTTPSSILCAKQLVWRGANVNMKTNNQDEETPLHTAAHFGLSELVAFYVEHGAIVDSVNAHMETPLAIAAYWALRFKEQEYSTEHHLVCRMLLDYKAEVNARDDDFKSPLHKAA 260          
BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: ANR39_HUMAN (Ankyrin repeat domain-containing protein 39 OS=Homo sapiens GN=ANKRD39 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.797e-12
Identity = 47/148 (31.76%), Postives = 75/148 (50.68%), Query Frame = 2
Query:  311 CGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRH 754
            C HP  V   L V ++   ++   E G   I SAA  G++  V+ L+ K  D +  +  G TALHYA+  G   + + L+  GAK +++   G TALHR +  G++ +  LL+  G+     D  G T L  A    + ++  LL++H
Sbjct:   13 CSHPSAV---LGVQQTLEEMDF--ERG---IWSAALNGDLGRVKHLIQKAEDPSQPDSAGYTALHYASRNGHYAVCQFLLESGAKCDAQTHGGATALHRASYCGHTEIARLLLSHGSNPRVVDDDGMTSLHKAAERGHGDICSLLLQH 152          

HSP 2 Score: 68.9366 bits (167), Expect = 7.514e-11
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 2
Query:  509 AASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRAS 811
            AA  G L  V+ LI +    +  D  G TALH  +  G+ A+C+ L+E GA+ DA    G T L  A  C + E+A LL+ HG++  V D +G T L +A+
Sbjct:   38 AALNGDLGRVKHLIQKAEDPSQPDSAGYTALHYASRNGHYAVCQFLLESGAKCDAQTHGGATALHRASYCGHTEIARLLLSHGSNPRVVDDDGMTSLHKAA 138          
BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: ANR19_HUMAN (Ankyrin repeat domain-containing protein 19 OS=Homo sapiens GN=ANKRD19 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.797e-12
Identity = 51/175 (29.14%), Postives = 84/175 (48.00%), Query Frame = 2
Query:  269 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYT 793
            R+  DRT+LH+  + G  EVV +LLS     N+ + ++     P+  A          +LL  GA+ N+K+    TALHYA       + E L+S  A I + ++ G T L    ++    + E L++  A + A D   +T LM AV   +  +  LL++   ++  +D  G T
Sbjct:   64 RDRKDRTVLHLTCAHGRVEVVTLLLSRRCQINIYDRLNR---TPLMKAVHCQEEACAIILLEHGANPNIKDIYSNTALHYAVYNKGTSLAEKLLSHHANIEALNEEGNTPLLFAINSRRQQIVEFLLKNQANLHAIDNFRRTALMLAVQHNSSSIVSLLLQQNINIFSQDLFGQT 235          
BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: AKR1_ASHGO (Palmitoyltransferase AKR1 OS=Ashbya gossypii GN=AKR1 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.797e-12
Identity = 58/210 (27.62%), Postives = 94/210 (44.76%), Query Frame = 2
Query:  281 DRTLLHVAASCGHPEVVEILLSVDESANVVNAV--DEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKN-DGGRTALHYAASKGWLKIVELLISRGAK----------------------------------INSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVL 799
            D TL+   A+C   ++  +   ++     V A   +EE  + +H A++   + +V  L+++GADVN+K  D   T LH+A+  G++ IV  L+  GA                                   ++S D  G TALH  A  G+    E L++  A+V   D  G TPL  A +  +  V   LI HG+DV +++ +G   L
Sbjct:   53 DPTLVKYHAACQRGDLKTVKDMIEAGVIDVKADWDEEEQVSGLHWASANNRLNLVRYLIAQGADVNIKGGDLEATPLHWASKSGYVYIVHCLLEHGADPLITDRQGYNLLHTSTFSSEVMLITYVLFTGQIPVDSPDPTGKTALHWAAYQGDPNTVEALLKFDADVRVVDTGGFTPLHWATVKGHPHVLKALIEHGSDVFLKNNDGKNAL 262          
BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: Y3287_PSEAE (Putative ankyrin repeat protein PA3287 OS=Pseudomonas aeruginosa GN=PA3287 PE=4 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.877e-12
Identity = 47/129 (36.43%), Postives = 66/129 (51.16%), Query Frame = 2
Query:  422 GNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRA 808
            GN   +E LL +G   NL+N  G + L  A+  G    V LL++  A  + ++  G T L   A  G+ A+ ELL+  GA+V+     G+T LM A +    EVA  L+ HGA  D +D  G T L  A
Sbjct:   27 GNSQRLEQLLQQGLPPNLRNHKGDSLLMLASYHGHADTVRLLLAYKADPDLRNLAGQTPLAGAAFKGDLAMVELLLAGGADVEGASADGKTALMMAAMFNQAEVAASLLAHGARRDAQDAAGLTPLAAA 155          
BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: Y3236_ARATH (Ankyrin repeat-containing protein At3g12360 OS=Arabidopsis thaliana GN=At3g12360 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 8.877e-12
Identity = 56/190 (29.47%), Postives = 89/190 (46.84%), Query Frame = 2
Query:  188 LFKAAETGDSSTFXXXXXXXXXXXXXXRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGAD-VNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSK-DKVGCTALHRGASTGNSALCELLIE-EGAEVDATDKAGQTPLMNAVICYNKEVALLLI 748
            LF AA+ G                   +N      LH+AA  GH  +VE+LL  D  A +          P+ SAA  G+  +V  LLSK  + + +     + ALH AA +G +++++ L+S+  ++  + DK G TALH      +S + +LL++ + A V   DK+  T L  A      E+  LL+
Sbjct:  133 LFTAADKGHLDVVKELLKYSSRESIAKKNRSGYDPLHIAAIQGHHAIVEVLL--DHDATLSQTFGPSNATPLVSAAMRGHTEVVNQLLSKAGNLLEISRSNNKNALHLAARQGHVEVIKALLSKDPQLARRIDKKGQTALHMAVKGQSSEVVKLLLDADPAIVMQPDKSCNTALHVATRKKRAEIVELLL 320          
The following BLAST results are available for this feature:
BLAST of DY262827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 417
Match NameE-valueIdentityDescription
SPKA_DICDI6.797e-1228.82Stress-activated protein kinase alpha OS=Dictyoste... [more]
NFKB2_CHICK6.797e-1232.62Nuclear factor NF-kappa-B p100 subunit OS=Gallus g... [more]
FEM1B_XENLA6.797e-1230.77Protein fem-1 homolog B OS=Xenopus laevis GN=fem1b... [more]
BCL3_HUMAN6.797e-1227.96B-cell lymphoma 3 protein OS=Homo sapiens GN=BCL3 ... [more]
ASB4_HUMAN6.797e-1229.79Ankyrin repeat and SOCS box protein 4 OS=Homo sapi... [more]
ANR39_HUMAN6.797e-1231.76Ankyrin repeat domain-containing protein 39 OS=Hom... [more]
ANR19_HUMAN6.797e-1229.14Ankyrin repeat domain-containing protein 19 OS=Hom... [more]
AKR1_ASHGO6.797e-1227.62Palmitoyltransferase AKR1 OS=Ashbya gossypii GN=AK... [more]
Y3287_PSEAE8.877e-1236.43Putative ankyrin repeat protein PA3287 OS=Pseudomo... [more]
Y3236_ARATH8.877e-1229.47Ankyrin repeat-containing protein At3g12360 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AC06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262827 ID=DY262827; Name=DY262827; organism=Citrus clementina; type=EST; length=1322bp
TGACGAACCGCGCACCGGGTGAGAACCGGACACAACCGAACCGCACCATA
CCATTGCGCACCGCTTTCGACTTGCAACTAGCTCGCCGCTGGACCAAATC
ACACCGTCAAAACTCTAATTCTCGGCAAATTGACAGTACAATTCCGGTAT
GGACATGGACATCGATCAAACAATCAAGGACAAAGACCTCTTCAAAGCCG
CCGAAACTGGAGATTCCTCAACATTCAAATCCCTCTCAAAACAGCAGCTC
TTAAAATCTCTCTCCTTGCGGAACGACGACGACCGCACCCTCCTCCACGT
CGCCGCCTCATGTGGTCACCCCGAGGTGGTGGAAATATTGTTGAGTGTTG
ATGAGTCGGCGAATGTAGTAAACGCTGTTGATGAAGAAGGGTGGGCTCCG
ATTCATTCTGCGGCTAGCATTGGCAATGTGACAATCGTGGAAATGTTGTT
AAGCAAAGGAGCTGATGTAAATTTGAAGAATGATGGTGGGCGAACCGCTC
TTCACTATGCTGCCAGCAAGGGATGGTTGAAGATTGTGGAACTTCTGATC
TCACGTGGTGCAAAAATTAACTCCAAGGACAAGGTTGGTTGCACAGCATT
GCACCGGGGAGCTAGTACAGGGAATTCAGCATTGTGTGAACTCTTAATTG
AAGAAGGAGCAGAGGTTGATGCTACTGATAAAGCCGGACAAACTCCTCTT
ATGAATGCAGTGATTTGCTATAACAAAGAGGTTGCTCTTCTTCTAATAAG
ACATGGAGCGGATGTTGATGTGGAAGACAAGGAAGGCTACACTGTGCTGG
GTCGGGCTTCAAATGATTTTAGACCCATACTGATTGATGCTGCCAAAGCT
ATGCTCGAAGGATGAATTCTTAGTTTGTAGCAAAAAGTGTAGCTAATGGT
AAGTGGCAGGCTGTGCATGCTGAAAGAATATTGTACTGCAAGGACAAGAC
CATGAACAATTTTTGGAAAAAATAGGCAAAGAATCATTGGTCACTTTAGC
TTATGTCCTAGCTTTTTAAAATTATGAGGAACAATGGAAAGAGGATTTTT
CNTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCGGCCGCTCAAA
ATAACCTCCGAGGGGGCCAAGCTAACCCGAACCCACCTTTCCTGGAAAAA
GGGGCCCCAAAAAAGGAGGCTAAAAAAAAAAAAGGGACCGGGCCCCCCCT
TTTTAAAACCCTTTGGAGCGGGAAAAAAAGGCCGACCGTTGGGTAATTTT
TTTGGGTTAAGGAAACCCACCATTTTTCTGTTGGGGGTGGGGGGGAAAAA
AAGGGTGGAACAAAAAAACCAC
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