DY262827 | Citrus Genome Database

Overview


Name	DY262827
Unique Name	DY262827
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1322

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: MIB1_HUMAN (E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens GN=MIB1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.973e-19
Identity = 66/184 (35.87%), Postives = 101/184 (54.89%), Query Frame = 2

Query:  269 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK---INSKDKVGCTALHRGASTGNSALCELLIEEG-AEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRA 808
            RN   +T LH+A + GH +VV+ LL      ++    D EG  P+H A S     I+ +LL  GADV + N+ G  ALH+AA +G    + +L+S+  +   ++ K   G TALH  A   +  + ELL+ +G A +D  +   QT L  AV   + ++  LL+R GA +D++DK+G T L  A
Sbjct:  526 RNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQ---DSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPLHEA 706

HSP 2 Score: 77.7962 bits (190), Expect = 1.618e-13
Identity = 54/178 (30.34%), Postives = 89/178 (50.00%), Query Frame = 2

Query:  287 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYN---KEVALLLIRHGADVDVEDKEGYTVLGRAS 811
            T +  A+  GH +++++LL  +     V A D++G   +H AA      ++E+L    AD+N +N   +T LH A +KG L++V+ L+  G   + +D  G T LH   S     +  +L+E GA+V  T+  G   L +A +  N     V L  +     VD +  +GYT L  A+
Sbjct:  466 TAMQAASQNGHVDILKLLLKQNVD---VEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAA 640

HSP 3 Score: 76.6406 bits (187), Expect = 3.604e-13
Identity = 53/185 (28.65%), Postives = 97/185 (52.43%), Query Frame = 2

Query:  272 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELL--IEEGAEVDATDKAGQTPLMNAVICYNKE------VALLLIRHGADVDVEDKEGYTVL 799
            N++    LH AA  G+P  + +LLS      +V+   ++G+  +H AA   +V + E+L+ +G A+++++N   +TALH A  +   +IV LL+  GAK++ +DK G T LH        +    L  +++  +VDA  +  +  L+  +     E      +A  L  +GAD+ + +K+G + L
Sbjct:  593 NNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAGAKLDIQDKDGDTPLHEALRHHTLSQLRQLQDMQDVGKVDAAWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLSIRNKKGQSPL 777

HSP 4 Score: 72.7886 bits (177), Expect = 5.204e-12
Identity = 48/179 (26.82%), Postives = 89/179 (49.72%), Query Frame = 2

Query:  275 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRAS 811
            D +  L+  AA+    +V ++L   D   N   A    G   + +A+  G+V I+++LL +  DV  ++  G  A+H+AA      ++E+L    A +N+++K   T LH   + G+  + + L++ G      D  G TPL +A+     ++  +L+  GADV + +  G+  L  A+
Sbjct:  430 DLNEELVKAAANGDVAKVEDLLKRPDVDVNGQCA----GHTAMQAASQNGHVDILKLLLKQNVDVEAEDKDGDRAVHHAAFGDEGAVIEVLHRGSADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDILAVLLEAGADVTITNNNGFNALHHAA 604

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BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: DAPK1_MOUSE (Death-associated protein kinase 1 OS=Mus musculus GN=Dapk1 PE=2 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.973e-19
Identity = 61/183 (33.33%), Postives = 95/183 (51.91%), Query Frame = 2

Query:  269 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASND 817
            ++    T LHVAA  GH +VV++L S   + +     D+E   P+H AA  G  ++ + L   G +VN+KN  G T L  A+++G+  IVE L   GA +N+ DK G  ALH         + + L+  G+ VD  D+ G TPL  A    +  + + L     ++D+ +K G T L  A+N+
Sbjct:  441 KDKSGETALHVAARYGHADVVQLLCSFGSNPDFQ---DKEEETPLHCAAWHGYYSVAKALCEVGCNVNIKNREGETPLLTASARGYHDIVECLAEHGADLNASDKDGHIALHLAVRRCQMEVIKTLLGHGSFVDFQDRHGNTPLHVACKDGSAPIVVALCEASCNLDISNKYGRTPLHLAANN 620

HSP 2 Score: 86.6557 bits (213), Expect = 3.483e-16
Identity = 52/169 (30.77%), Postives = 93/169 (55.03%), Query Frame = 2

Query:  293 LHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVL 799
            L +AA CG+ +++++L+   +  + ++  D+ G   I+ A+  G+V  ++ L      +++K+  G TALH AA  G   +V+LL S G+  + +DK   T LH  A  G  ++ + L E G  V+  ++ G+TPL+ A      ++   L  HGAD++  DK+G+  L
Sbjct:  383 LLIAAGCGNIQMLQLLI---KRGSRIDVQDKGGSNAIYWASRHGHVDTLKFLNENKCPLDVKDKSGETALHVAARYGHADVVQLLCSFGSNPDFQDKEEETPLHCAAWHGYYSVAKALCEVGCNVNIKNREGETPLLTASARGYHDIVECLAEHGADLNASDKDGHIAL 548

HSP 3 Score: 86.2705 bits (212), Expect = 4.548e-16
Identity = 57/187 (30.48%), Postives = 98/187 (52.41%), Query Frame = 2

Query:  293 LHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASND-FRPILIDAAKA 850
            ++ A+  GH + ++ L   +E+   ++  D+ G   +H AA  G+  +V++L S G++ + ++    T LH AA  G+  + + L   G  +N K++ G T L   ++ G   + E L E GA+++A+DK G   L  AV     EV   L+ HG+ VD +D+ G T L  A  D   PI++   +A
Sbjct:  416 IYWASRHGHVDTLKFL---NENKCPLDVKDKSGETALHVAARYGHADVVQLLCSFGSNPDFQDKEEETPLHCAAWHGYYSVAKALCEVGCNVNIKNREGETPLLTASARGYHDIVECLAEHGADLNASDKDGHIALHLAVRRCQMEVIKTLLGHGSFVDFQDRHGNTPLHVACKDGSAPIVVALCEA 599

HSP 4 Score: 82.8037 bits (203), Expect = 5.029e-15
Identity = 52/176 (29.55%), Postives = 96/176 (54.55%), Query Frame = 2

Query:  284 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRAS 811
            + ++H       P +  +L S+  S+  VN  ++ G  P+  AA  GN+ ++++L+ +G+ +++++ GG  A+++A+  G +  ++ L      ++ KDK G TALH  A  G++ + +LL   G+  D  DK  +TPL  A       VA  L   G +V+++++EG T L  AS
Sbjct:  346 KAIIHAINDDNVPGLQHLLGSL--SSYDVNQPNKHGTPPLLIAAGCGNIQMLQLLIKRGSRIDVQDKGGSNAIYWASRHGHVDTLKFLNENKCPLDVKDKSGETALHVAARYGHADVVQLLCSFGSNPDFQDKEEETPLHCAAWHGYYSVAKALCEVGCNVNIKNREGETPLLTAS 519

HSP 5 Score: 82.8037 bits (203), Expect = 5.029e-15
Identity = 53/175 (30.29%), Postives = 90/175 (51.43%), Query Frame = 2

Query:  269 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYT 793
            ++ ++ T LH AA  G+  V + L  V  + N+ N    EG  P+ +A++ G   IVE L   GAD+N  +  G  ALH A  +  +++++ L+  G+ ++ +D+ G T LH     G++ +   L E    +D ++K G+TPL  A      +V   L   GA+V+    +G T
Sbjct:  474 QDKEEETPLHCAAWHGYYSVAKALCEVGCNVNIKN---REGETPLLTASARGYHDIVECLAEHGADLNASDKDGHIALHLAVRRCQMEVIKTLLGHGSFVDFQDRHGNTPLHVACKDGSAPIVVALCEASCNLDISNKYGRTPLHLAANNGILDVVRYLCLMGANVEALTSDGKT 645

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BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: RAI14_RAT (Ankycorbin OS=Rattus norvegicus GN=Rai14 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 2.577e-19
Identity = 65/209 (31.10%), Postives = 106/209 (50.72%), Query Frame = 2

Query:  179 DKDLFKAAETGDSSTFXXXXXXXXXXXXXXRNDDDRTLLHVAASCGHPEVVEILLS--VDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVL 799
            D  L +A E GD+                  + + +T  H+AA+ GH E ++++++  VD     V A D  G + +H AA  G+   ++ LL   +     ++ G+TALHYAA++G L+ V++L    + IN KD  G   L      G+S  C  L++ GA+V++ DK G+T LM A    +      LI+ GAD+++ D  G+  L
Sbjct:   20 DDRLLQAVENGDAEKVASLLGKKGASATK-HDSEGKTAFHLAAAKGHVECLKVMVTHGVD-----VTAQDSSGHSALHIAAKNGHPEYIKKLLQYKSPAESVDNLGKTALHYAAAQGSLQAVQVLCEHKSPINLKDLDGNIPLLVAIQNGHSEACHFLLDHGADVNSRDKNGRTALMLACETGSANTVEALIKKGADLNLVDSLGHNAL 222

HSP 2 Score: 87.8113 bits (216), Expect = 1.563e-16
Identity = 57/175 (32.57%), Postives = 90/175 (51.43%), Query Frame = 2

Query:  275 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVL 799
            +DDR L   A   G  E V  LL    ++   +  D EG    H AA+ G+V  ++++++ G DV  ++  G +ALH AA  G  + ++ L+   +   S D +G TALH  A+ G+    ++L E  + ++  D  G  PL+ A+   + E    L+ HGADV+  DK G T L
Sbjct:   19 NDDRLLQ--AVENGDAEKVASLLGKKGASATKH--DSEGKTAFHLAAAKGHVECLKVMVTHGVDVTAQDSSGHSALHIAAKNGHPEYIKKLLQYKSPAESVDNLGKTALHYAAAQGSLQAVQVLCEHKSPINLKDLDGNIPLLVAIQNGHSEACHFLLDHGADVNSRDKNGRTAL 189

HSP 3 Score: 86.6557 bits (213), Expect = 3.483e-16
Identity = 54/170 (31.76%), Postives = 88/170 (51.76%), Query Frame = 2

Query:  269 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEV-ALLLIRHGADVDVE 775
            ++    + LH+AA  GHPE ++ LL     A    +VD  G   +H AA+ G++  V++L    + +NLK+  G   L  A   G  +    L+  GA +NS+DK G TAL     TG++   E LI++GA+++  D  G   L  + +  N  + +LLL +   D D++
Sbjct:   82 QDSSGHSALHIAAKNGHPEYIKKLLQYKSPAE---SVDNLGKTALHYAAAQGSLQAVQVLCEHKSPINLKDLDGNIPLLVAIQNGHSEACHFLLDHGADVNSRDKNGRTALMLACETGSANTVEALIKKGADLNLVDSLGHNALYYSKLSENAGIQSLLLSKISQDADLK 248

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BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: YD58_SCHPO (Ankyrin repeat-containing protein C6C3.08 OS=Schizosaccharomyces pombe GN=SPAC6C3.08 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 4.395e-19
Identity = 65/181 (35.91%), Postives = 95/181 (52.49%), Query Frame = 2

Query:  272 NDDDRTLLHVAASCGHPEVVEILLSVDESANVV-NAVDEEGWAPIHSAA---SIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK-INSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVL 799
            +DD RT LH A S G    +  LL   +  N+  +  DE GW P+  +    S+ +  I E++     D  +   GG+T LHYAA KG L IV+LL  +  + I  KD  G T LHR A+ G   + + LI + A ++ +D  G TPL  A+   + +V + L+R GAD   +D E +T L
Sbjct:   34 DDDKRTPLHWACSVGKVNTIYFLL---KQPNIKPDEKDEAGWTPLMISINNRSVPDNVIEELINRSDVDPTITTRGGQTCLHYAAGKGRLSIVQLLCDKAPELIRKKDLQGQTPLHRAAAVGKIQVVKYLISQRAPLNTSDSYGFTPLHFALAEGHPDVGVELVRAGADTLRKDSENHTAL 211

[Close]

BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: MIB_DROME (E3 ubiquitin-protein ligase mind-bomb OS=Drosophila melanogaster GN=mib1 PE=1 SV=3)

HSP 1 Score: 95.5153 bits (236), Expect = 7.497e-19
Identity = 73/223 (32.74%), Postives = 115/223 (51.57%), Query Frame = 2

Query:  161 IDQTIKDKDLFKA---AETGDSSTFXXXXXXXXXXXXXXRNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK---INSKDKVGCTALHRGASTGNSALCELLIEEG-AEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRA 808
            +D  I+DKD  +A   A  GD +                RN   +T LH+A + GH  VV+ LL++    ++    D EG  P+H A S  +  ++ +LL  GAD+ L N+ G  ALH+AA KG    +++L+++  +   +  K   G TALH  A   +  + ELL+  G A +D  +   QT L  AV   + ++  LL++ GAD+++ DK+G T L  A
Sbjct:  592 VDVEIEDKDGDRAVHHAAFGDEAAVIEILAKAGADLNA-RNKRRQTSLHIAVNKGHLNVVKTLLTLGCHPSLQ---DSEGDTPLHDAISKEHDEMLSLLLDFGADITLNNNNGFNALHHAALKGNPSAMKILLTKTNRPWIVEEKKDDGYTALHLAALNNHVEIAELLVHMGKANMDRQNVNLQTALHLAVERQHVQIVKLLVQDGADLNIPDKDGDTPLHEA 810

HSP 2 Score: 85.1149 bits (209), Expect = 1.013e-15
Identity = 57/178 (32.02%), Postives = 93/178 (52.25%), Query Frame = 2

Query:  287 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYN-KEVALLLIRHGADVDVEDK--EGYTVLGRAS 811
            T L  A+  GH EV+++LL     A  V   D++G   +H AA      ++E+L   GAD+N +N   +T+LH A +KG L +V+ L++ G   + +D  G T LH   S  +  +  LL++ GA++   +  G   L +A +  N   + +LL +      VE+K  +GYT L  A+
Sbjct:  570 TALQAASQNGHIEVIQVLL---RHAVDVEIEDKDGDRAVHHAAFGDEAAVIEILAKAGADLNARNKRRQTSLHIAVNKGHLNVVKTLLTLGCHPSLQDSEGDTPLHDAISKEHDEMLSLLLDFGADITLNNNNGFNALHHAALKGNPSAMKILLTKTNRPWIVEEKKDDGYTALHLAA 744

HSP 3 Score: 76.6406 bits (187), Expect = 3.604e-13
Identity = 39/141 (27.66%), Postives = 76/141 (53.90%), Query Frame = 2

Query:  389 GWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRAS 811
            G   + +A+  G++ ++++LL    DV +++  G  A+H+AA      ++E+L   GA +N+++K   T+LH   + G+  + + L+  G      D  G TPL +A+   + E+  LL+  GAD+ + +  G+  L  A+
Sbjct:  568 GHTALQAASQNGHIEVIQVLLRHAVDVEIEDKDGDRAVHHAAFGDEAAVIEILAKAGADLNARNKRRQTSLHIAVNKGHLNVVKTLLTLGCHPSLQDSEGDTPLHDAISKEHDEMLSLLLDFGADITLNNNNGFNALHHAA 708

HSP 4 Score: 69.3218 bits (168), Expect = 5.754e-11
Identity = 54/181 (29.83%), Postives = 94/181 (51.93%), Query Frame = 2

Query:  272 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKE----VALLLIRHGADVDVEDKEGYTVL 799
            N++    LH AA  G+P  ++ILL+      +V    ++G+  +H AA   +V I E+L+  G A+++ +N   +TALH A  +  ++IV+LL+  GA +N  DK G T LH        AL    + +  ++   +  G+  LM      NK+    +A  L  +GAD+ +++++  T L
Sbjct:  697 NNNGFNALHHAALKGNPSAMKILLTKTNRPWIVEEKKDDGYTALHLAALNNHVEIAELLVHMGKANMDRQNVNLQTALHLAVERQHVQIVKLLVQDGADLNIPDKDGDTPLH-------EALRHHTLSQLKQLQDVEGFGKL-LMGLRNANNKKASASIACFLAANGADLTLKNRKQQTPL 869

[Close]

BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: INVSA_XENLA (Inversin-A OS=Xenopus laevis GN=invs-A PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.497e-19
Identity = 65/193 (33.68%), Postives = 97/193 (50.26%), Query Frame = 2

Query:  278 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKAML 856
            + RT    AA  G  EVV  +L +D    V N  D+ G   +H+A+  G +T V +LL     V+  +    TAL  A   G  +++  LI  GAK++  DK G + LH  A  GN+ +C++LIE     DA D  G+TPL  A          +L+ + AD +++DK G T L  + N+     +DA K +L
Sbjct:  317 EGRTAFMWAAGKGSDEVVRTMLELDPELEV-NRTDKYGGTALHAASLSGQITTVRILLENRVQVDAVDVMKHTALFRACEMGHREVISTLIKGGAKVHLVDKDGRSPLHWAALGGNANVCQILIENNINPDAQDYEGRTPLQCAAYGGYIGCMEVLMENKADPNIQDKNGRTALHWSCNNG---YLDAVKLLL 505

HSP 2 Score: 74.7146 bits (182), Expect = 1.369e-12
Identity = 64/210 (30.48%), Postives = 90/210 (42.86%), Query Frame = 2

Query:  278 DDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDG-GRTALHYAASKGWLKIVELLIS---------------------RGA--------------KINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVL 799
            + RT LH+A   G+ EVV +L S     NV    D     P+H AA +G   I  +LL      N+ +D  G T LHYAA       V +L+S                     +G+              ++N  DK G TALH  + +G      +L+E   +VDA D    T L  A    ++EV   LI+ GA V + DK+G + L
Sbjct:  216 EGRTPLHLAVGDGNQEVVRLLTSY-RGCNVA-PYDNLFRTPLHWAALLGYTPIAHLLLETNNSPNIPSDSQGATPLHYAAQGNCPDTVRVLLSHISVRDEADLEGRTAFMWAAGKGSDEVVRTMLELDPELEVNRTDKYGGTALHAASLSGQITTVRILLENRVQVDAVDVMKHTALFRACEMGHREVISTLIKGGAKVHLVDKDGRSPL 423

HSP 3 Score: 74.3294 bits (181), Expect = 1.789e-12
Identity = 50/160 (31.25%), Postives = 84/160 (52.50%), Query Frame = 2

Query:  287 TLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQ--TPLMNAVICYNKEVALLLIRHGA 760
            T L  A   GH EV+  L+   +    V+ VD++G +P+H AA  GN  + ++L+    + + ++  GRT L  AA  G++  +E+L+   A  N +DK G TALH   + G     +LL+   A  +  +   +  TPL  A++  ++EV   ++ HGA
Sbjct:  388 TALFRACEMGHREVISTLI---KGGAKVHLVDKDGRSPLHWAALGGNANVCQILIENNINPDAQDYEGRTPLQCAAYGGYIGCMEVLMENKADPNIQDKNGRTALHWSCNNGYLDAVKLLLGYSAFPNQMENTEERYTPLDYALLGGHQEVIQFMLEHGA 544

HSP 4 Score: 72.7886 bits (177), Expect = 5.204e-12
Identity = 52/177 (29.38%), Postives = 84/177 (47.46%), Query Frame = 2

Query:  335 ILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIE--EGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPILIDAAKAMLE 859
            +L  +  S  V++  D+ G  P+  +      +  E LL  GA VN  +  GRTALH AA  G  ++++LL+SR A    +D    TA+H      ++    L+++     +VDA D+  QT L  +          LL+RHG+++ + D EG   L  A+    P      + +LE
Sbjct:   26 LLKLIASSPEVIDQEDQLGRTPLMYSVLGDRRSCAEALLKHGAQVNHPDRSGRTALHLAAQTGNHRLLKLLLSRKADCTHRDLRDITAVHLSTRHQDTRCLALILKYTPPGQVDAQDQRKQTALHWSAYYNRPRHVRLLVRHGSNIGIPDTEGKIPLHWAAGHKDPEAALTVRCLLE 202

[Close]

BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: HACE1_HUMAN (E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens GN=HACE1 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 7.497e-19
Identity = 59/172 (34.30%), Postives = 94/172 (54.65%), Query Frame = 2

Query:  284 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVL 799
            R+LLH+AA+CG  E + +LL   + AN  N  D  G  P+H AA  G    +  LL   ADVN+ N+ G TA+H+ A  G  +++  L+   + ++ +D +G TALH     G+    + L++ GA+++  + +G TPL  A     ++ A +L+  GA   + DK G T L
Sbjct:   66 RSLLHIAANCGSVECLVLLLK--KGANP-NYQDISGCTPLHLAARNGQKKCMSKLLEYSADVNICNNEGLTAIHWLAVNGRTELLHDLVQHVSDVDVEDAMGQTALHVACQNGHKTTVQCLLDSGADINRPNVSGATPLYFACSHGQRDTAQILLLRGAKY-LPDKNGVTPL 233

[Close]

BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: TNKS1_HUMAN (Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 9.791e-19
Identity = 79/238 (33.19%), Postives = 106/238 (44.54%), Query Frame = 2

Query:  293 LHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKN-DG---------------------------------------------------GR--TALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRA-SNDFRPILIDA 841
            LH A S GH EV E+L+    S NV    D   + P+H AA+ G   I ++LL  GAD   KN DG                                                   GR  T LH AA    L++ E L+  GA +N++DK G   LH  AS G+  +  LLI+    V+ATDK   TPL  A      ++  LL+ HGAD  ++++EG T L  A ++D R +LIDA
Sbjct:  721 LHNACSYGHYEVAELLVRHGASVNVA---DLWKFTPLHEAAAKGKYEICKLLLKHGADPTKKNRDGNTPLDLVKEGDTDIQDLLRGDAALLDAAKKGCLARVQKLCTPENINCRDTQGRNSTPLHLAAGYNNLEVAEYLLEHGADVNAQDKGGLIPLHNAASYGHVDIAALLIKYNTCVNATDKWAFTPLHEAAQKGRTQLCALLLAHGADPTMKNQEGQTPLDLATADDIRALLIDA 955

HSP 2 Score: 91.2781 bits (225), Expect = 1.414e-17
Identity = 68/206 (33.01%), Postives = 97/206 (47.09%), Query Frame = 2

Query:  269 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYA--ASKGWL-------------------KIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFR 823
            R+D     LH A S GH EVV +LL      N   A D   + P+H AA  G + +  +LL  GAD N++N  G++AL  A  ++K  L                   K++ LL       ++ D    T LH  A      + +LL++ GA+V A DK G  PL NA    + EV  LL++HGA V+  D   +T L  A++  R
Sbjct:  245 RDDGGLIPLHNACSFGHAEVVSLLLCQGADPN---ARDNWNYTPLHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNR 447

HSP 3 Score: 88.1965 bits (217), Expect = 1.197e-16
Identity = 57/145 (39.31%), Postives = 77/145 (53.10%), Query Frame = 2

Query:  272 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW--APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPL 700
            +D D  LL  A+  G  E V+ L S       VN  D EG    P+H AA    V++VE LL  GADV+ K+ GG   LH A S G  ++ ELL+  GA +N  D    T LH  A+ G   +C+LL++ GA+    ++ G TPL
Sbjct:  648 SDVDYRLLE-ASKAGDLETVKQLCSSQN----VNCRDLEGRHSTPLHFAAGYNRVSVVEYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAKGKYEICKLLLKHGADPTKKNRDGNTPL 787

HSP 4 Score: 84.7297 bits (208), Expect = 1.323e-15
Identity = 70/209 (33.49%), Postives = 99/209 (47.37%), Query Frame = 2

Query:  269 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTA--------------------------LHYAASKGWLKIVELLISRGAKINSKDKVG--CTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRAS 811
            +N D  T LHVAA   H +V+E+L    +    +NA+D  G   +H AA  G++    +LLS G+D ++ +  G TA                          L  A+  G L+ V+ L S    +N +D  G   T LH  A     ++ E L+  GA+V A DK G  PL NA    + EVA LL+RHGA V+V D   +T L  A+
Sbjct:  554 KNKDFMTPLHVAAERAHNDVMEVL---HKHGAKMNALDTLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSESTPIRTSDVDYRLLEASKAGDLETVKQLCS-SQNVNCRDLEGRHSTPLHFAAGYNRVSVVEYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAA 758

HSP 5 Score: 83.9593 bits (206), Expect = 2.257e-15
Identity = 68/222 (30.63%), Postives = 105/222 (47.30%), Query Frame = 2

Query:  284 RTLLHVAASCGHPEVVEILLSVDESANVVN------------AVDE--EGWAPIHS---------AASIGNVTIVEMLLSKGADVNLKNDGGR--TALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLG---RASNDFRPI------LIDAAK 847
            +T LH AA  GH +   +LLS     ++++            AV +      PI +         A+  G++  V+ L S   +VN ++  GR  T LH+AA    + +VE L+  GA +++KDK G   LH   S G+  + ELL+  GA V+  D    TPL  A      E+  LL++HGAD   ++++G T L        D + +      L+DAAK
Sbjct:  592 QTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEAVQQILSESTPIRTSDVDYRLLEASKAGDLETVKQLCSS-QNVNCRDLEGRHSTPLHFAAGYNRVSVVEYLLHHGADVHAKDKGGLVPLHNACSYGHYEVAELLVRHGASVNVADLWKFTPLHEAAAKGKYEICKLLLKHGADPTKKNRDGNTPLDLVKEGDTDIQDLLRGDAALLDAAK 812

HSP 6 Score: 78.9518 bits (193), Expect = 7.262e-14
Identity = 47/139 (33.81%), Postives = 80/139 (57.55%), Query Frame = 2

Query:  422 GNVTIVEMLLSKGADVNLKNDGGRTA--LHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRASNDFRPIL 832
            G+V+ V+ L+   A+VN K+  GR +  LH+AA  G   +VE L+  GA ++++D  G   LH   S G++ +  LL+ +GA+ +A D    TPL  A I    +V ++L++HGAD ++ + +G + L  A    + +L
Sbjct:  193 GDVSRVKRLVD-AANVNAKDMAGRKSSPLHFAAGFGRKDVVEHLLQMGANVHARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSALDLADPSAKAVL 330

HSP 7 Score: 78.5666 bits (192), Expect = 9.484e-14
Identity = 50/139 (35.97%), Postives = 78/139 (56.12%), Query Frame = 2

Query:  290 LLHVAASCGHPEVVEILLSVDESANVVNAVDEEGW--APIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPL 700
            L  +  +C + +V  +   VD +ANV NA D  G   +P+H AA  G   +VE LL  GA+V+ ++DGG   LH A S G  ++V LL+ +GA  N++D    T LH  A  G   +C +L++ GA+ +  +  G++ L
Sbjct:  183 LRELLEACRNGDVSRVKRLVD-AANV-NAKDMAGRKSSPLHFAAGFGRKDVVEHLLQMGANVHARDDGGLIPLHNACSFGHAEVVSLLLCQGADPNARDNWNYTPLHEAAIKGKIDVCIVLLQHGADPNIRNTDGKSAL 319

HSP 8 Score: 76.6406 bits (187), Expect = 3.604e-13
Identity = 45/125 (36.00%), Postives = 66/125 (52.80%), Query Frame = 2

Query:  290 LLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAE 664
            LL  A S    +++ +L  ++ + +   A D     P+H AA    V IV++LL  GADV+ K+ GG   LH A S G  ++ ELL+  GA +N+ D    T LH  AS     +C LL+  GA+
Sbjct:  339 LLEAARSGNEEKLMALLTPLNVNCH---ASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD 460

[Close]

BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 9.791e-19
Identity = 59/172 (34.30%), Postives = 93/172 (54.07%), Query Frame = 2

Query:  284 RTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVL 799
            R+LLH+AA+CG  E + +LL   + AN  N  D  G  P+H AA  G    +  LL   ADVN+ N+ G TA+H+ A  G  +++  L+     ++ +D +G TALH     G+    + L++ GA+++  + +G TPL  A     ++ A +L+  GA   + DK G T L
Sbjct:   66 RSLLHIAANCGSVECLVLLLK--KGANP-NYQDISGCTPLHLAARNGQKKCMSKLLEYSADVNICNNEGLTAIHWLAVNGRTELLHDLVQHVTDVDVEDAMGQTALHVACQNGHKTTVQCLLDSGADINRPNVSGATPLYFACSHGQRDTAQILLLRGAKY-LPDKNGVTPL 233

[Close]

BLAST of DY262827 vs. ExPASy Swiss-Prot
Match: MIB1_DANRE (E3 ubiquitin-protein ligase mib1 OS=Danio rerio GN=mib1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.670e-18
Identity = 65/184 (35.33%), Postives = 100/184 (54.35%), Query Frame = 2

Query:  269 RNDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAK---INSKDKVGCTALHRGASTGNSALCELLIEEG-AEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRA 808
            RN   +T LH+A + GH +VV+ LL      ++    D EG  P+H A S     ++ +LL  GADV + N+ G  ALH+AA +G    + +L+S+  +   ++ K   G TALH  A   +  + ELL+ +G A +D  +   QT L  AV   + ++  LL+R  A +DV+DK+G T L  A
Sbjct:  526 RNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQ---DSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLDVQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEA 706

HSP 2 Score: 79.7221 bits (195), Expect = 4.257e-14
Identity = 57/180 (31.67%), Postives = 93/180 (51.67%), Query Frame = 2

Query:  287 TLLHVAASCGHPEVVEILL--SVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYN---KEVALLLIRHGADVDVEDKEGYTVLGRAS 811
            T +  A+  GH +V+++LL  SVD     + A D++G   +H A+     +++E+L   GAD+N +N   +T LH A +KG L++V+ L+  G   + +D  G T LH   S     +  +L+E GA+V  T+  G   L +A +  N     V L  +     VD +  +GYT L  A+
Sbjct:  466 TAMQAASQNGHVDVLKLLLKHSVD-----LEAEDKDGDRAVHHASFGDEGSVIEVLHRGGADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAA 640

HSP 3 Score: 72.0182 bits (175), Expect = 8.877e-12
Identity = 47/179 (26.26%), Postives = 89/179 (49.72%), Query Frame = 2

Query:  275 DDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKGADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELLIEEGAEVDATDKAGQTPLMNAVICYNKEVALLLIRHGADVDVEDKEGYTVLGRAS 811
            D +  L+  AA+    +V +IL   D   N   A    G   + +A+  G+V ++++LL    D+  ++  G  A+H+A+      ++E+L   GA +N+++K   T LH   + G+  + + L++ G      D  G TPL +A+     ++  +L+  GADV + +  G+  L  A+
Sbjct:  430 DINEELVKAAANGDLAKVEDILKRPDVDVNGQCA----GHTAMQAASQNGHVDVLKLLLKHSVDLEAEDKDGDRAVHHASFGDEGSVIEVLHRGGADLNARNKRRQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNALHHAA 604

HSP 4 Score: 70.0922 bits (170), Expect = 3.373e-11
Identity = 51/184 (27.72%), Postives = 96/184 (52.17%), Query Frame = 2

Query:  272 NDDDRTLLHVAASCGHPEVVEILLSVDESANVVNAVDEEGWAPIHSAASIGNVTIVEMLLSKG-ADVNLKNDGGRTALHYAASKGWLKIVELLISRGAKINSKDKVGCTALHRGASTGNSALCELL--IEEGAEVDATDKAGQTPLM-----NAVICYNKEVALLLIRHGADVDVEDKEGYTVL 799
            N++    LH AA  G+P  + +LLS      +V+   ++G+  +H AA   +V + E+L+ +G A+++++N   +TALH A  +   +IV LL+   AK++ +DK G T LH        +    L  +++ ++V+  + +  T +M      A       +A  L  +GAD+ + +K+G + L
Sbjct:  593 NNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGNANLDVQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQDMQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPL 776

The following BLAST results are available for this feature:

BLAST of DY262827 vs. ExPASy Swiss-Prot

BLAST of DY262827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 417


Match Name	E-value	Identity	Description
MIB1_HUMAN	1.973e-19	35.87	E3 ubiquitin-protein ligase MIB1 OS=Homo sapiens G...	[more]
DAPK1_MOUSE	1.973e-19	33.33	Death-associated protein kinase 1 OS=Mus musculus ...	[more]
RAI14_RAT	2.577e-19	31.10	Ankycorbin OS=Rattus norvegicus GN=Rai14 PE=2 SV=2	[more]
YD58_SCHPO	4.395e-19	35.91	Ankyrin repeat-containing protein C6C3.08 OS=Schiz...	[more]
MIB_DROME	7.497e-19	32.74	E3 ubiquitin-protein ligase mind-bomb OS=Drosophil...	[more]
INVSA_XENLA	7.497e-19	33.68	Inversin-A OS=Xenopus laevis GN=invs-A PE=1 SV=1	[more]
HACE1_HUMAN	7.497e-19	34.30	E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens ...	[more]
TNKS1_HUMAN	9.791e-19	33.19	Tankyrase-1 OS=Homo sapiens GN=TNKS PE=1 SV=2	[more]
HACE1_MOUSE	9.791e-19	34.30	E3 ubiquitin-protein ligase HACE1 OS=Mus musculus ...	[more]
MIB1_DANRE	1.670e-18	35.33	E3 ubiquitin-protein ligase mib1 OS=Danio rerio GN...	[more]

Pages

Properties


Property Name	Value
Genbank description	IC0AAA10AC06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY262827 ID=DY262827; Name=DY262827; organism=Citrus clementina; type=EST; length=1322bp
TGACGAACCGCGCACCGGGTGAGAACCGGACACAACCGAACCGCACCATA
CCATTGCGCACCGCTTTCGACTTGCAACTAGCTCGCCGCTGGACCAAATC
ACACCGTCAAAACTCTAATTCTCGGCAAATTGACAGTACAATTCCGGTAT
GGACATGGACATCGATCAAACAATCAAGGACAAAGACCTCTTCAAAGCCG
CCGAAACTGGAGATTCCTCAACATTCAAATCCCTCTCAAAACAGCAGCTC
TTAAAATCTCTCTCCTTGCGGAACGACGACGACCGCACCCTCCTCCACGT
CGCCGCCTCATGTGGTCACCCCGAGGTGGTGGAAATATTGTTGAGTGTTG
ATGAGTCGGCGAATGTAGTAAACGCTGTTGATGAAGAAGGGTGGGCTCCG
ATTCATTCTGCGGCTAGCATTGGCAATGTGACAATCGTGGAAATGTTGTT
AAGCAAAGGAGCTGATGTAAATTTGAAGAATGATGGTGGGCGAACCGCTC
TTCACTATGCTGCCAGCAAGGGATGGTTGAAGATTGTGGAACTTCTGATC
TCACGTGGTGCAAAAATTAACTCCAAGGACAAGGTTGGTTGCACAGCATT
GCACCGGGGAGCTAGTACAGGGAATTCAGCATTGTGTGAACTCTTAATTG
AAGAAGGAGCAGAGGTTGATGCTACTGATAAAGCCGGACAAACTCCTCTT
ATGAATGCAGTGATTTGCTATAACAAAGAGGTTGCTCTTCTTCTAATAAG
ACATGGAGCGGATGTTGATGTGGAAGACAAGGAAGGCTACACTGTGCTGG
GTCGGGCTTCAAATGATTTTAGACCCATACTGATTGATGCTGCCAAAGCT
ATGCTCGAAGGATGAATTCTTAGTTTGTAGCAAAAAGTGTAGCTAATGGT
AAGTGGCAGGCTGTGCATGCTGAAAGAATATTGTACTGCAAGGACAAGAC
CATGAACAATTTTTGGAAAAAATAGGCAAAGAATCATTGGTCACTTTAGC
TTATGTCCTAGCTTTTTAAAATTATGAGGAACAATGGAAAGAGGATTTTT
CNTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCGGCCGCTCAAA
ATAACCTCCGAGGGGGCCAAGCTAACCCGAACCCACCTTTCCTGGAAAAA
GGGGCCCCAAAAAAGGAGGCTAAAAAAAAAAAAGGGACCGGGCCCCCCCT
TTTTAAAACCCTTTGGAGCGGGAAAAAAAGGCCGACCGTTGGGTAATTTT
TTTGGGTTAAGGAAACCCACCATTTTTCTGTTGGGGGTGGGGGGGAAAAA
AAGGGTGGAACAAAAAAACCAC