DY262830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: RPN8_ASHGO (26S proteasome regulatory subunit RPN8 OS=Ashbya gossypii GN=RPN8 PE=3 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 9.814e-72 Identity = 142/283 (50.18%), Postives = 196/283 (69.26%), Query Frame = 3 Query: 48 EKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAE-----------------LIKAFSVKTNDMMLVIYLSSLIRSVIA 842 E+V V PLVLLS++D+Y R+ KR VGVLLG + T+ V+NS+A+PFEED+K+P +WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL I+ LF Y N +L+I+DV+ + +G+PT AY +EEVK++ + +++ FVH+P+ I A E EEIGVEHLLRDV+D L+ +T +L +L+GL +LR+I YLD V +LP NH IL LQDVFNLLPNL + L KA +VKTND ++VIY+S+L+R++IA Sbjct: 6 EQVNVAPLVLLSVLDHYKRMNTPDNKRCVGVLLGDNSGSTIKVTNSFALPFEEDEKNPDVWFLDHNYIENMNDMCKKINAKEKMIGWYHSGPKLRSSDLKINGLFKKYTQGNSLLLIVDVKQQGVGLPTDAYMAIEEVKDDGS-STERTFVHLPTAIEAEEAEEIGVEHLLRDVRDQAAGNLSLRLTNQLKSLQGLQRKLRDIVAYLDKVNSGQLPANHIILGKLQDVFNLLPNLGSPDEEAPATKKDDVLASSNTLQKALTVKTNDELMVIYISNLMRAIIA 287
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_ARATH (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana GN=TIF3F1 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.063e-25 Identity = 77/266 (28.95%), Postives = 134/266 (50.38%), Query Frame = 3 Query: 60 VHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFK-GTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVH---VPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIAL 845 +HPLV+ ++ D + R D+ +RV+G LLGS GTVD+ NSYAVP E + D +YH +M + ++N+KE +VGWYSTG + IH + VPNP+ + +D KA+ V N + +++ H +P ++ + E +G + L K T++ L N++ G ++ L + ++ Y+D V+ ++ ++ I + D LP L + D +L++YLSS+ R+ ++L Sbjct: 30 IHPLVIFNVCDCFVR-RPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAV---DIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFTNGEGTIKAF-----VSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVL----KATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSL 282
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_CULQU (Eukaryotic translation initiation factor 3 subunit F OS=Culex quinquefasciatus GN=eIF3-S5 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.176e-24 Identity = 79/277 (28.52%), Postives = 140/277 (50.54%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV-------KDTTISTL-----ANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V VHP+VL IVD Y R D+ +RV+G LLGS KG V+V+N + VP +E + Y +Y + +R+N E++VGW++TG ++ + IH+ + NP+ + +D + KAY V K+ +F + E+ ++E E +G+ + + + T+S + +E +GKL L G E+ Y++ V+ EK ++ + L D+ + +PN+ E K F+ D+++V+ LS LI++ + L+ Sbjct: 12 VRVHPVVLFQIVDAYERRNADS-ERVIGTLLGSVEKGIVEVTNCFCVPHKEHADQVEA---ELGYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLTAARMGIKAYVCVSLGVPGG--KTGCMFTPINVEVTSYEPEVVGLSLCAKTIGVQSNPARPRTVSPMLDLAQVSEASGKLQTLLG------EVLNYVEDVLAEKQQPDNFVGRALLDLIHSVPNMKHEEFAKMFNSNVKDLLMVVTLSQLIKTQLQLN 276
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EI3F1_DROMO (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila mojavensis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.176e-24 Identity = 78/271 (28.78%), Postives = 143/271 (52.77%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++NA E+VVGW++TG ++ + IH+ + NPV + +D + + +AY ++ K+ +F +P E+ ++E E G++ L + V + T++ + + A K L + L I Y+D VI K+ ++ + L D+ + +P++ + + F+ D+++VI LS LI++ + L+ Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNANENVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQSGRMGLRAYICIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVTVSPAHRPKTVAPMLDLAQISEAATK-LQSLLDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRDLLMVITLSQLIKTQLQLN 271
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EI3F1_DROWI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila willistoni GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 2.619e-24 Identity = 79/273 (28.94%), Postives = 144/273 (52.75%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG ++ + IH+ + NPV V +D + + +AY ++ KS +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + + F+ D+++VI LS LI++ + L+ Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYELNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHVTVDTSLQGGRMGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHAVPHMTHEQFTQMFNANVRDLLMVITLSQLIKTQLQLN 271
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_ANOGA (Eukaryotic translation initiation factor 3 subunit F OS=Anopheles gambiae GN=eIF3-S5 PE=3 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 4.467e-24 Identity = 76/272 (27.94%), Postives = 140/272 (51.47%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV-------KDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V VHP+VL IVD Y R D+ +RV+G LLGS KG V+V+N + +P +E + Y +Y + +R+NA E++VGW++TG ++ + IH+ + NPV + +D + KAY V KS +F + E+ ++E E +G++ ++ + + T+S + ++ A L A L ++ Y++ V+ EK + + L D+ + +PN+ + + F+ D+++V+ LS LI++ + L+ Sbjct: 12 VRVHPVVLFQIVDAYERRNADS-ERVIGTLLGSVDKGVVEVTNCFCLPHKEHTDQVEA---ELGYASDLYELNQRVNASENIVGWWATGQEVTNHSSVIHEYYARECTNPVHLTLDTSLTGARMGIKAYVCVSLGVPGG--KSGCMFTPINVEVTSYEPEIVGLQLCMKTIGVQSNPSRPRTVSPML-DLAQVTDASDKLLALLSDVLAYVEDVLSEKQQPENTVGRALLDLIHSVPNMTGDQFAQMFNSNVKDLLMVVTLSQLIKTQLQLN 276
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EI3F1_DROVI (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila virilis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 4.467e-24 Identity = 78/273 (28.57%), Postives = 144/273 (52.75%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V VHP+VL +VD + R D+ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++NA E VVGW++TG ++ + IH+ + NPV + +D + + +AY ++ K+ +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++ + + F+ D+++VI LS LI++ + L+ Sbjct: 8 VRVHPVVLFQVVDAFERRNADSH-RVIGTLLGSVDKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNANESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRAYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVPPMLDLAQISEASTKLQSL---LELILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHEQFTQMFNANVRDLLMVITLSQLIKTQLQLN 271
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_PANTR (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes GN=EIF3F PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.834e-24 Identity = 75/272 (27.57%), Postives = 144/272 (52.94%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V +HP++L SIVD+Y R + RV+G LLG+ K +V+V+N ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY V + + +F + + A ++ E IGV+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++ + L + N +P + + + ND+++V YL++L +S IAL+ Sbjct: 96 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALN 355
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_MACFA (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis GN=EIF3F PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.834e-24 Identity = 75/272 (27.57%), Postives = 144/272 (52.94%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V +HP++L SIVD+Y R + RV+G LLG+ K +V+V+N ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY V + + +F + + A ++ E IGV+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++ + L + N +P + + + ND+++V YL++L +S IAL+ Sbjct: 96 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALN 355
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_HUMAN (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens GN=EIF3F PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.834e-24 Identity = 75/272 (27.57%), Postives = 144/272 (52.94%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V +HP++L SIVD+Y R + RV+G LLG+ K +V+V+N ++VP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ + PNP+ + +D + + KAY V + + +F + + A ++ E IGV+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++ + L + N +P + + + ND+++V YL++L +S IAL+ Sbjct: 92 VRLHPVILASIVDSYER-RNEGAARVIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIALN 351 The following BLAST results are available for this feature:
BLAST of DY262830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262830 ID=DY262830; Name=DY262830; organism=Citrus clementina; type=EST; length=1308bpback to top |