DY262830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPS (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 7.131e-22 Identity = 74/273 (27.11%), Postives = 144/273 (52.75%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V VHP+VL +VD + R ++ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + ++Y ++ K+ +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P+++ + + F+ ++++VI LS LI++ + L+ Sbjct: 8 VRVHPVVLFQVVDAFERRNAESH-RVIGTLLGSVEKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVAPANRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMSHEQFTQMFNANVRNLLMVITLSQLIKTQLQLN 271
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EI3F1_DROPE (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila persimilis GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 7.131e-22 Identity = 74/273 (27.11%), Postives = 144/273 (52.75%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTISTLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V VHP+VL +VD + R ++ RV+G LLGS KG V+V+N + VP +E D + +Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D + + ++Y ++ K+ +F +P E+ ++E E G++ L + V + T+ + + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P+++ + + F+ ++++VI LS LI++ + L+ Sbjct: 8 VRVHPVVLFQVVDAFERRNAESH-RVIGTLLGSVEKGVVEVTNCFCVPHKEHDDQVEA---ELSYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGRMGLRSYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVAPANRPKTVPPMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMSHEQFTQMFNANVRNLLMVITLSQLIKTQLQLN 271
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_DICDI (Eukaryotic translation initiation factor 3 subunit F OS=Dictyostelium discoideum GN=eif3f PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.710e-21 Identity = 70/268 (26.12%), Postives = 128/268 (47.76%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNR--VAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPN--PVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIAL 845 V VHP+V+ +I+D+Y R V +D RV+G LLG + G +++ N + V E ++ ++ Y M + + + +E ++GWY+TG + EN + I+ + + + N P+ + +D + AY + N F +P EI E E G+E + + D ++L +E+ +L LD L I Y++ V ++ + + L LP N + K + D+++++YLSSL RS +A+ Sbjct: 15 VKVHPVVIFNILDHYIRRNVGQD---RVIGTLLGFNNDGVLEIRNCFPVVHSETEQIA----VEMEYQRKMLDLHLKSSPREPIIGWYATGNDINENSVHINNFYRDEMGNSTPIHLTVDTGLTNDTMGIHAYM-AHNLSLNPESSLGSYFSQLPLEILTFEAENAGLESIAQTKYDQQSTSLLSELESLQGSLTKLDEMLESITSYIESVEKGEIQGDPRLGRFLAKTIQALPKANAQVMDKVINNSVKDLLMIVYLSSLTRSQLAV 274
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: CSN6_XENLA (COP9 signalosome complex subunit 6 OS=Xenopus laevis GN=cops6 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.996e-20 Identity = 67/264 (25.38%), Postives = 132/264 (50.00%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRS 833 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + + +D+ I + Y+ + FK++ +GWY+TG +D+ +H+ + +P+ + ++ K +P Y E V + ++ + + +A E E IGV+H+ R + ST+A + + +A+K L +R+R I Y+ ++P NHEIL + + LP L+ + F + ND+ L+ YL ++ ++ Sbjct: 32 VALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSQINDEKITI---NKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVY---ESVIDIVNGEATMLLAELSYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVRLILEYVRAAEGGEVPFNHEILREASALCHCLPVLSTDKFKTDFYDQCNDVGLMSYLGTITKT 289
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: CSN6_XENTR (COP9 signalosome complex subunit 6 OS=Xenopus tropicalis GN=cops6 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.139e-19 Identity = 66/264 (25.00%), Postives = 132/264 (50.00%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRS 833 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + + +++ I + Y+ + FK++ +GWY+TG +D+ +H+ + +P+ + ++ K +P Y E V + ++ + + +A E E IGV+H+ R + ST+A + + +A+K L +R+R I Y+ ++P NHEIL + + LP L+ + F + ND+ L+ YL ++ ++ Sbjct: 33 VALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSQINEEKITI---NKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVY---ESVIDIVNGEATMLLAELSYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVRLILEYVRAAEAGEVPFNHEILREASALCHCLPVLSTDKFKMDFYDQCNDVGLMSYLGTITKT 290
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_USTMA (Eukaryotic translation initiation factor 3 subunit F OS=Ustilago maydis GN=UM00175 PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.487e-19 Identity = 79/275 (28.73%), Postives = 138/275 (50.18%), Query Frame = 3 Query: 36 SRPIEKVIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLF------HNYVPNPVLVIID-VQPKELGIPTKAYYDVEEVKENATQKSQK-VFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLP-NLNVAELIKAFSVKTNDMMLVIYLSSLIRS 833 SR + V VHP+ L SI+D+Y R D + RV+G LLG+ + +++ N +AVP ED ++ + +D YH SMY + +++ E +VGWY+T P+L I + H V + ID +P LGI K+Y AT K++ VF+ +P+ + H E LL IS+ ++ +LK + ++L + Y+ VI + + + L D +++P L+ +L F+ D+++V YL++++R+ Sbjct: 26 SRSVTGVHVHPVALFSILDHYLR-RNDGQHRVIGTLLGTRTESEIEIKNCFAVPHLEDAEEGQVQ-VDMEYHRSMYELCQKVRPDEVIVGWYATSPELNTYSALIQDFYSRETAPHQAVHLTMDTTIDGSKPSGLGI--KSYI---SSPLGATPKAENCVFLPLPTNL-LHSTPEHSSLSLL---ASQNISSPLTDLDALAVSLKQVQSQLDRVLTYVRAVISGEKEGDKAVGRFLNDTISVVPAGLDDNKLETLFNAHLQDVLMVSYLANVVRA 289
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: CSN6_PONAB (COP9 signalosome complex subunit 6 OS=Pongo abelii GN=COPS6 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.487e-19 Identity = 65/264 (24.62%), Postives = 132/264 (50.00%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRS 833 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ + F + ND+ L+ YL ++ ++ Sbjct: 42 VALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKT 299
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: CSN6_PIG (COP9 signalosome complex subunit 6 OS=Sus scrofa GN=COPS6 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.487e-19 Identity = 65/264 (24.62%), Postives = 132/264 (50.00%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRS 833 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ + F + ND+ L+ YL ++ ++ Sbjct: 37 VALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKT 294
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: CSN6_MOUSE (COP9 signalosome complex subunit 6 OS=Mus musculus GN=Cops6 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.487e-19 Identity = 65/264 (24.62%), Postives = 132/264 (50.00%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRS 833 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ + F + ND+ L+ YL ++ ++ Sbjct: 38 VALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKT 295
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: CSN6_HUMAN (COP9 signalosome complex subunit 6 OS=Homo sapiens GN=COPS6 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.487e-19 Identity = 65/264 (24.62%), Postives = 132/264 (50.00%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRS 833 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ + F + ND+ L+ YL ++ ++ Sbjct: 41 VALHPLVILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKT 298 The following BLAST results are available for this feature:
BLAST of DY262830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262830 ID=DY262830; Name=DY262830; organism=Citrus clementina; type=EST; length=1308bpback to top |