DY262830
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: CSN6_BOVIN (COP9 signalosome complex subunit 6 OS=Bos taurus GN=COPS6 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 1.942e-19 Identity = 65/264 (24.62%), Postives = 132/264 (50.00%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRK--RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--ISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRS 833 V +HPLV+L+I D++ R+ + +V+G L+G ++V NS+ + ++ +D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K +P + E V + ++ +F + +A E E IGV+H+ R + ST+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ + F + ND+ L+ YL ++ ++ Sbjct: 38 VALHPLVILNISDHWIRMRSQEGRPMQVIGALIGKQEGRNIEVMNSFELLSHTVEEKI---IIDKEYYYTKEEQFKQVFKELDFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFKTDFYDQCNDVGLMAYLGTITKT 295
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: CSN6B_ARATH (COP9 signalosome complex subunit 6b OS=Arabidopsis thaliana GN=CSN6B PE=1 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 7.380e-19 Identity = 72/282 (25.53%), Postives = 132/282 (46.81%), Query Frame = 3 Query: 60 VHPLVLLSIVDNYNRVAKDTRK----------------------RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIID--VQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTIST-LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSL 824 +HPLV+L+I D++ RV RV G ++G TV++ NS+ + F DP + LD ++ E ++K++ +V+GWYSTG E+D+ IH+ + +PV V+++ + + +P Y V + Q +FVH I E E I V+H+ L+ + +T LA +TG +A+K L++R+R + ++ + P + +L + + LP + + F ++ ND +L+ YL+ + Sbjct: 13 LHPLVMLNISDHFTRVKTQLNPPAASCATGNGSNNADAMLLQNPRVYGCVIGLQRGRTVEIFNSFELIF-----DPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDATESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGI---PQSIFVHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHIVAMQKGDKPCENSVLRQVSSLLRSLPAAESEKFNENFLMEYNDKLLMSYLAMI 286
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_BOMMO (Eukaryotic translation initiation factor 3 subunit F OS=Bombyx mori GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 2.804e-18 Identity = 72/269 (26.77%), Postives = 129/269 (47.96%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV----KDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 848 V VHP+VL IVD Y R D+ RV+G L G+S KG V+V+N + VP +E + NY +Y + +R+N+ E +VGW++TG ++ + IH+ + PV V +D + +AY V N Q +F V + +E E +G++ + V + ++ +++ ++A L++ L + Y D P + E L + + P+L AF+ D+++V+ L+ LI++ + L+ Sbjct: 7 VKVHPVVLFQIVDAYERRNADSH-RVIGTLWGTSDKGVVEVTNCFCVPHKEHADQVEA---ELNYAMDVYELNRRVNSSESIVGWWATGNEVTNHSSVIHEYYSRECREPVHVTLDTSLAGGRMGLRAYVCVPLGVPNGKQGC--MFTPVDVTLTCYEPEIVGLQVCQKTVSGGGRGSSGVAAGSDLAQVMSAASSLESLLEQALQYADGAA-AGAPADAEAGRALLQLAHSAPDLAKDTFSDAFASSVKDLLMVVTLAQLIKTQLQLN 268
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: CSN6A_ARATH (COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana GN=CSN6A PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 3.101e-17 Identity = 69/282 (24.47%), Postives = 128/282 (45.39%), Query Frame = 3 Query: 60 VHPLVLLSIVDNYNRVAKDTRK----------------------RVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIID--VQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTIST-LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSL 824 +HPLV+++I D+Y RV RV G ++G TV++ NS+ + + DP LD ++ E ++K++ +++GWYSTG E+D+ IH+ + +PV V+++ + + +P Y V + Q +F H I E E I V+H+ L+ + +T LA +TG +A+K L++R+R + L + ++ +L + + LP + F ++ ND +L+ YL+ + Sbjct: 13 LHPLVIVNISDHYTRVKTQLNPPASICASGHGSNNGEAMFQQNPRVYGCVIGVQRGRTVEIFNSFELLY-----DPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGI---PQLIFAHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNLAAMQKGDKSCDNSVLRQVSSLLRRLPAMESERFQDNFLMEYNDKLLITYLAMI 286
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPOR (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus oryzae GN=AO090005001590 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 5.289e-17 Identity = 73/273 (26.74%), Postives = 134/273 (49.08%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNP-VLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIAL 845 V++HP L SI+D+ R D ++RV+G LLG+ S GT V++ ++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P V + + +P + + T+AY F+ VP EI E E+ G+E + RDV ++ + + ++ A++ + + + Y++ VIDE+ P + + L + L P + A++ + F+ D+++V YL++ IR+ + L Sbjct: 30 VVIHPQALFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRTTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTVSTEPGK-DVETRAYISAPVGVTAERAADSAAFIPVPYEIRYGETEKSGLESIAAARDV-ESRAANIFTDIEALERAVEEVLGMIDRVSKYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMEL 296
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_MALGO (Eukaryotic translation initiation factor 3 subunit F OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=MGL_1945 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.010e-16 Identity = 75/276 (27.17%), Postives = 129/276 (46.74%), Query Frame = 3 Query: 36 SRPIEKVIVHPLVLLSIVDNYNRVAKD-TRKRVVGVLLGSSFKGTVDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDI----------HQLFHNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLP-NLNVAELIKAFSVKTNDMMLVIYLSSLI 827 SR I V VHP+ L SI+D+Y R +D ++ RV+G LLG+ + V+V N++AVP E +DP LD +H M + R+ E V+GWYST +L N I HQ H + + +V + G+ + Y V + + F+ +P+ + E+ + HL K I+ ++ +L+ + A+L + Y+ V+ ++ + + +L D ++P L+ + L F D+ +V YLS L+ Sbjct: 27 SRSITAVKVHPVALFSILDHYLR--RDVSQPRVIGTLLGTRSESEVEVRNAFAVPHGES-QDPWQIHLDAEHHRRMLDLHLRVRPDEVVLGWYSTNTELNSNSALIQDHYSRETAPHQAIH------LTLNTNVADEANGLGVQCY--VSALLGAMAKPEDCAFLSLPTHLLMSTPEQTALRHLAAP-KPQNIT----DLDALKASLEDVQAKLDRVLTYVRRVLAGEVEGDKAVGRYLSDTIGVVPAGLDESLLESLFQSHLQDVFMVSYLSKLV 286
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPTN (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_08559 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 2.625e-16 Identity = 73/273 (26.74%), Postives = 133/273 (48.72%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNP-VLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIAL 845 V++ P L SI+D+ R D ++RV+G LLG+ S GT V++ +++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P V + + +P + I T+AY F+ VP EI E E+ G+E + RD ++ + L ++ A++ + + + Y++ VIDE+ P + + L + L P + A++ + F+ D+++V YL++ IR+ + L Sbjct: 30 VVIQPQALFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTVSTEPGK-DIETRAYISAPVGVTAERAADSAAFIPVPHEIRYGETEKSGLEAIAAARDAEERA-ANLFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMEL 296
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_NEOFI (Eukaryotic translation initiation factor 3 subunit F OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_016300 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.847e-16 Identity = 75/278 (26.98%), Postives = 132/278 (47.48%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNP-VLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIAL 845 V++ P + SI+D+ R D ++RV+G LLG+ S GT V++ +++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P V + + +P + I T+AY F+ VP EI E E+ G+E + KD + T T ++ L+ + E+ G Y++ VIDE+ P + + L + L P + A++ + F+ D+++V YL++ IR+ + L Sbjct: 30 VVIQPQAIFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEPGK-DIETRAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLE-TIASAKDA-----ESRATNIFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMEL 296
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPNC (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An08g00880 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.847e-16 Identity = 70/272 (25.74%), Postives = 130/272 (47.79%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIAL 845 V++ P L SI+D+ R D ++RV+G LLG+ S GT V++ +++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P + + I T+AY F+ VP EI E E+ G+E + RD ++ + + ++ A++ + + + Y++ VIDE+ P + + +L + L P + A++ + F+ D+++V YL++ IR+ + L Sbjct: 30 VVIQPQALFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEAGKDIETRAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLEAIGAARDAEERR-ANIFTDIEALERAIEDVLGMIDRVSRYVESVIDEEAPASTALGQYLLNTLALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMEL 296
BLAST of DY262830 vs. ExPASy Swiss-Prot
Match: EIF3F_ASPFU (Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus fumigatus GN=AFUA_1G09330 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 5.847e-16 Identity = 75/278 (26.98%), Postives = 132/278 (47.48%), Query Frame = 3 Query: 54 VIVHPLVLLSIVDNYNRVAKDTRKRVVGVLLGS-SFKGT-VDVSNSYAVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNP-VLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIAL 845 V++ P + SI+D+ R D ++RV+G LLG+ S GT V++ +++AV E + D Y + M ++ + N KE +VGWY+T +L I + P+P V + + +P + I T+AY F+ VP EI E E+ G+E + KD + T T ++ L+ + E+ G Y++ VIDE+ P + + L + L P + A++ + F+ D+++V YL++ IR+ + L Sbjct: 30 VVIQPQAIFSILDHSLRRNAD-QERVIGTLLGTRSEDGTEVEIRSTFAVGHTETTDQVEV---DMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTVSTEPGK-DIETRAYISAPVGVTAERAADSAAFIPVPYEIRYGEAEKSGLE-AIASAKDA-----ESRATNIFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNALALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMEL 296 The following BLAST results are available for this feature:
BLAST of DY262830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262830 ID=DY262830; Name=DY262830; organism=Citrus clementina; type=EST; length=1308bpback to top |