DY262917

Overview
NameDY262917
Unique NameDY262917
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1250
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262917 vs. ExPASy Swiss-Prot
Match: NAC68_ARATH (NAC domain-containing protein 68 OS=Arabidopsis thaliana GN=NAC68 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.143e-21
Identity = 56/130 (43.08%), Postives = 76/130 (58.46%), Query Frame = 3
Query:  105 GFRFHPTDEELVVHYLKKKAASAPLPV-AIIAEVDLYKFDPW-ELPSKATFGEQ--EWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSKGNQKV-GVKKALVFYGGKPPKGIKTNWIMHEYRI 479
            G+RF PT EE++ HYLK K       V   I+E+++    P  +LP  A    +  EWYFFSP +   PN  +  R   SG+WK TG D+ I   +GN  V G+KK LV++ GK P G++T W+MHEY I
Sbjct:    7 GYRFSPTGEEVINHYLKNKLLGKYWLVDEAISEINILSHKPSKDLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPTGVDREIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHI 136          
BLAST of DY262917 vs. ExPASy Swiss-Prot
Match: NAC5_ARATH (NAC domain-containing protein 5 OS=Arabidopsis thaliana GN=NAC005 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.815e-20
Identity = 55/130 (42.31%), Postives = 74/130 (56.92%), Query Frame = 3
Query:   99 PPGFRFHPTDEELVVHYLKKKAASAPLPVA--IIAEVDLYKFDPWELPSKATFG--EQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSKGN-QKVGVKKALVFYGGKPPKGIKTNWIMHEY 473
            P GFRF PTD E+V  YL+ K   +       +I+ VD+  FDPW+LPS +     +Q WYFF  ++ KY  G R  R   SG+WK TG    I+   G+ +K+G K+ LVF   K   G K++W MHEY
Sbjct:    4 PVGFRFRPTDGEIVDIYLRPKNLESNTSHVDEVISTVDICSFDPWDLPSHSRMKTRDQVWYFFGRKENKYGKGDRQIRKTKSGFWKKTGVTMDIMRKTGDREKIGEKRVLVF---KNHGGSKSDWAMHEY 130          
BLAST of DY262917 vs. ExPASy Swiss-Prot
Match: NAC3_ARATH (NAC domain-containing protein 3 OS=Arabidopsis thaliana GN=NAC003 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.397e-19
Identity = 53/131 (40.46%), Postives = 74/131 (56.49%), Query Frame = 3
Query:   93 QLPPGFRFHPTDEELVVHYLKKKAASAPLPVA--IIAEVDLYKFDPWELP--SKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSKGNQKVGVKKALVFYGGKPPKGIKTNWIMHEY 473
            + P G RF PTDEE+VV YL  K +          I  V + + DPWELP  S+    +  W FF P++ KY  G +  R   SG+WK+TG  KPI+  +  Q++G KK L+FY  K     K++W++HEY
Sbjct:    2 ETPVGLRFCPTDEEIVVDYLWPKNSDRDTSHVDRFINTVPVCRLDPWELPCQSRIKLKDVAWCFFRPKENKYGRGDQQMRKTKSGFWKSTGRPKPIM--RNRQQIGEKKILMFYTSKES---KSDWVIHEY 127          
BLAST of DY262917 vs. ExPASy Swiss-Prot
Match: NAC1_ARATH (NAC domain-containing protein 1 OS=Arabidopsis thaliana GN=NAC001 PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 1.107e-16
Identity = 51/134 (38.06%), Postives = 73/134 (54.48%), Query Frame = 3
Query:  105 GFRFHPTDEELVVHYLKKKA---ASAPLPVAIIAEVDLYKFDPWELPSKATFGEQE--WYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSKG------NQKVGVKKALVFYGGKPPKGIKTNWIMHEY 473
            GF F P DEELV HYL+ K     S  + VAI +EV++  +DPW L  ++ +  ++  WYFFS R+     G R +R   SG WK TG    +    G        K+G K+ LVF  G+ P   K++W++HE+
Sbjct:    6 GFGFRPNDEELVGHYLRNKIEGNTSRDVEVAI-SEVNICSYDPWNLRFQSKYKSRDAMWYFFSRRENN--KGNRQSRTTVSGKWKLTGESVEVKDQWGFCSEGFRGKIGHKRVLVFLDGRYPDKTKSDWVIHEF 136          
The following BLAST results are available for this feature:
BLAST of DY262917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC68_ARATH1.143e-2143.08NAC domain-containing protein 68 OS=Arabidopsis th... [more]
NAC5_ARATH2.815e-2042.31NAC domain-containing protein 5 OS=Arabidopsis tha... [more]
NAC3_ARATH1.397e-1940.46NAC domain-containing protein 3 OS=Arabidopsis tha... [more]
NAC1_ARATH1.107e-1638.06NAC domain-containing protein 1 OS=Arabidopsis tha... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10BC08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262917 ID=DY262917; Name=DY262917; organism=Citrus clementina; type=EST; length=1250bp
ATCAAACCCACATACAATTTTTCCATAAAATTAAGTAAATCATAATCTTA
TTAATGGAGAGTACGGATTCGTCGACGAGCTCACAGCACCCGCAGCTGCC
ACCGGGGTTCCGATTCCACCCGACGGATGAAGAGCTGGTGGTTCACTACC
TCAAAAAGAAGGCTGCATCAGCTCCTCTTCCTGTTGCAATTATTGCAGAG
GTTGATCTTTACAAGTTTGATCCATGGGAGCTCCCAAGTAAGGCTACTTT
CGGGGAGCAAGAATGGTACTTTTTCAGTCCTAGAGACAGGAAATACCCAA
ACGGAGCGAGGCCAAATAGAGCAGCAACTTCAGGATATTGGAAGGCAACG
GGGACTGATAAGCCGATATTAACATCTAAAGGGAACCAGAAAGTTGGTGT
GAAAAAGGCTCTGGTCTTTTATGGTGGCAAGCCTCCCAAAGGGATTAAAA
CCAATTGGATTATGCATGAATATCGCATCGTCGACAATATTTCTGGAACA
AAGCCGCCGCCCCATCAGCTCCCAGCTGATTTGGCCAACAAGAAACACTC
TTTAAGGCTTGATGATTGGGTTTTATGCCGGATTTACAAGAAAAACAACG
CACAACGGCCGATGGAGAGGGACAGGGACGAAGATAGTTTTGAGGGCATG
TGTGTGACGCTGCCACCAAATCAAAATCCGAAGCCCTTCCCGGCTCCGCC
TGGCAGAAGTACATTAAGCTACGGTTCAATATTCGAACAAGATGACCATT
TCTTTGAAGGGATGTTATCCTCAGCAGGAGAAGGCATACACCAAAACAGC
TGCGTTTCGAGCTCGAAAGCGCCACCTAACACAATGTCCATGTCCCTGGT
TTCACCTACTTCTAATTCATTAAACGTGCAATCCCACCGCAGTTCTGGAA
CGAAACTTCCGGCTCCCTGGCTTCGTCTCCTTCCCGGAAAAGTTTCTTGG
CGATCTTAACAGCGGCGGCGGACCGGCACCGATCTTGAGCCACATCACGA
TAACACTCCCTTTGTTCTTTGCTCAATCCGTTTCCACAGAACGCCCATTT
CACCCAAAAACAATGGCCTTTCTGGGTCCCTTGGGGAATCAACGGGCTAT
TTAAGGGAAAGATTTTCACTTCCGGGCCCTGAATTGGAAACCTAAATTTA
GTTTTGGGAAAAAGGGGGGGGAACTTTGTGGGAATTTTTTTTTTTTTTAA
AATTTAATAAATTTTTATTTTTTTATTTTTTTTTCCCCCCCCCCAAAATT
back to top