DY262919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_GEOUR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=kdsB PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 5.371e-46 Identity = 105/246 (42.68%), Postives = 146/246 (59.35%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP---------QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 ++ IIPAR+AS+RFEGK L +I+GKPM+Q +ER+ A+ + ++VATDDE+IA FG MTS GT+R E +L+ DI+VN+QGDEPLIEP +ID +K L + T T +K D PN VK V D GYA+YFSR +P N K N + H+G+ Y +FL + + PT L++ E LEQL+VLENGY++KV++ D+E+ GVD L + Sbjct: 2 KITAIIPARYASTRFEGKALADIMGKPMVQHVYERTAKASLVSEVIVATDDERIAAAVHAFGGRAEMTSRVHETGTDRLAEVAARLDS--DIIVNVQGDEPLIEPAMIDEAIKPLAEDSSVMMGTLKTRIKTLHDFLSPNVVKVVTDWEGYALYFSRSPLP-NFRDKWNDLKDEAFASRKLLCYKHVGLYVYRRDFLLQFAQMSPTYLEMAEKLEQLRVLENGYRIKVVETDYESIGVDTPGDLEK 244
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_GEOSM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter sp. (strain M21) GN=kdsB PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 5.371e-46 Identity = 101/243 (41.56%), Postives = 146/243 (60.08%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY--------NKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETL 960 ++ +IPAR+AS+RFEGK L +I+G+PM+Q +ER+ AT + ++VATDDE+IA + FG V MTS + GT+R E K++ DIVVN+QGDEPLI+P +ID ++ L P +T +K D PN VK V D G +YFSR +P+ V+ + H+G+ Y FL ++ GL PT L+L E LEQL+VLENGY++K+++ + E+ GVD L Sbjct: 2 KITAVIPARYASTRFEGKALADIMGRPMVQHVYERAAKATLVSEVIVATDDERIAAAVRAFGGRVEMTSPTHETGTDRLAEVAAKIDA--DIVVNVQGDEPLIDPAMIDEAIRPLLDDPSIPMATLKCRIKTLHDFLSPNVVKVVSDPTGNVLYFSRSPLPFFRDKWNDLKDDAFVSGKLLCYKHVGLYVYRREFLPVFAGLKPTYLELAEKLEQLRVLENGYRIKIVETEFESIGVDTPADL 242
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_GEOBB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=kdsB PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.197e-45 Identity = 99/243 (40.74%), Postives = 146/243 (60.08%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY--------NKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETL 960 ++ +IPAR+AS+RFEGK L +I+G+PM+Q +ER+ AT + ++VATDDE+IA + FG V MTS + GT+R E +++ DI+VN+QGDEPLI+P +ID ++ L P +T +K D PN VK V D G +YFSR +P+ V+ + H+G+ Y FL ++ GL PT L+L E LEQL+VLENGY++K+++ + E+ GVD L Sbjct: 2 KITAVIPARYASTRFEGKALADIMGRPMVQHVYERAAKATLVSEVIVATDDERIAAAVRAFGGRVEMTSPTHETGTDRLAEVAARIDA--DIIVNVQGDEPLIDPAMIDEAIRPLLDDPSIPMATLKCRIKTLHDFLSPNVVKVVSDPTGNVLYFSRSPLPFFRDKWNDLKDDAFVSGKLLCYKHVGLYVYRREFLPVFAGLQPTYLELAEKLEQLRVLENGYRIKIVETEFESIGVDTPADL 242
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PELCD (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=kdsB PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 3.481e-45 Identity = 104/242 (42.98%), Postives = 144/242 (59.50%), Query Frame = 1 Query: 262 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-----SGKVNPQFPYLL-HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 + +IPAR+ASSRF GKPL ILGK MIQR +ER+ A +D +VVATDD +IA+ FG +V MT GT+R E +++ + ++VN+QGDEPLI+P +I+ V L P T T L ++ DPN VK V D G+A+YFSR IP+ + V+P L H+G+ Y +FL + GL +PL+ E LEQL+ LENGY ++V++ D + GVD E L R Sbjct: 3 ITAVIPARYASSRFPGKPLARILGKTMIQRVYERTAQAACIDRVVVATDDSRIADVVSGFGGEVQMTRADHATGTDRLAEVTARIDTQ--LIVNVQGDEPLIDPHMIEAAVAPLSEDPAIPMGTLKTPLLNWQEYRDPNVVKVVTDRRGFALYFSRAPIPHPRELAVDDSAVSPASMGLFRHIGLYVYRKDFLLTFAGLPESPLERLEKLEQLRALENGYAIRVVETDRVSLGVDTPEDLVR 242
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_CHLCV (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydophila caviae GN=kdsB PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 4.547e-45 Identity = 95/240 (39.58%), Postives = 146/240 (60.83%), Query Frame = 1 Query: 250 FRSRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 F S+ VG++PAR+ S+RF GKPL +ILGK +I+RT+E + LD ++VATDD++I + FG D ++TS C NGTER E + + + +I+VNIQGDEP ++ ++D +V+ L+ P+ T V + + +VKCV D +G A+YFSR IP+ + + P LH+G+ ++ N L Y PTPL EDLEQL++LE+G + V V+ ++ VD E + + Sbjct: 6 FASKKVGVLPARWGSARFTGKPLASILGKSLIRRTYENINQSIALDKVIVATDDQRIMDHVLDFGGDCVLTSPECANGTERTAETISRYFPEAEIIVNIQGDEPCLQHTVVDALVRKLEEFPEIQIVTPVAKTTDSHEILTNQKVKCVFDKNGKALYFSRSPIPH----ILKKETPIYLHIGVYAFRRNALFNYIESSPTPLSQAEDLEQLRILEHGGSIHVCVVEAKSPSVDYPEDINK 241
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SYNFM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=kdsB PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 7.756e-45 Identity = 108/236 (45.76%), Postives = 146/236 (61.86%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETL 960 R+VGIIPAR+ SSRF GKPLV+ILGKPMI+ +ERS A LD L+VATDD +IA FG + ++T +GT+R EA + LE DIVVNIQGDEPL+ +I+ +V+ALQ +T A S +D +PN VK V+D A+YFSR IP+ + G + +L HLG +Y ++FL+ + L P L+ E LEQL+ LE+GY ++V + GVD E L Sbjct: 2 RIVGIIPARYQSSRFPGKPLVDILGKPMIRHVYERSARAGCLDRLIVATDDARIAAAVAGFGGEALLTRADHASGTDRLAEAARLLELDGADIVVNIQGDEPLVNHRMIEALVEALQCDRHCPMATLAFPSESLQDYNNPNVVKVVLDRGLRALYFSRAPIPFVRDGAADAP-AFLKHLGFYAYSASFLQTFSRLPPGRLEGLEKLEQLRALEHGYGIRVALSPVDTRGVDTPEDL 236
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PORG3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=kdsB PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.013e-44 Identity = 103/250 (41.20%), Postives = 148/250 (59.20%), Query Frame = 1 Query: 256 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP-----QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR*IIY 978 + V+ IIPARFASSRF GKPL ++LGK MIQR ER +A + VVATDDE+I + + FG +V+MTS C +GTERC EA K+ + IV+N+QGDEP I+ E ID ++ A P+ +T + +F+ PN K V+D+ GYA+YFSR +IPY + V P + Y H+GI ++ L+ L + + E LEQL+ LE GY+++V++ G+D E + + I Y Sbjct: 3 TEVIAIIPARFASSRFPGKPLADMLGKSMIQRVHER--IAGVVPRAVVATDDERIRQAVEDFGGEVVMTSPECSSGTERCREAFDKVGRGEKIVLNLQGDEPFIQKEQIDLLISAFD-KPETDIATLAEVFSSDASFERLNNPNSPKIVLDHGGYALYFSRSVIPYLRG--VQPDSWCRRHTYYKHIGIYAFRPTVLRKITSLPQSTAEQAESLEQLRWLEYGYRIRVLQTQQSTIGIDTPEDMDKAIAY 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PORGI (3-deoxy-manno-octulosonate cytidylyltransferase OS=Porphyromonas gingivalis GN=kdsB PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.257e-44 Identity = 102/250 (40.80%), Postives = 147/250 (58.80%), Query Frame = 1 Query: 256 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFD----PNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP-----QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR*IIY 978 + V+ IIPARFASSRF GKPL ++LGK MIQR ER + + VVATDDE+I + + FG +V+MTS C +GTERC EA K+ + IV+N+QGDEP I+ E ID ++ A P+ +T + +F+ PN K V+D+ GYA+YFSR +IPY + V P + Y H+GI ++ L+ L + + E LEQL+ LE GY+++V++ G+D E + + I Y Sbjct: 3 TEVIAIIPARFASSRFPGKPLADMLGKSMIQRVHER--IVGVVPRAVVATDDERIRQAVEDFGGEVVMTSPECSSGTERCREAFDKVGRGEKIVLNLQGDEPFIQKEQIDLLISAFD-KPETDIATLAEVFSSDVSFERLNNPNSPKIVLDHGGYALYFSRSVIPYLRG--VQPDSWCRRHTYYKHIGIYAFRPTVLRKITSLPQSTAEQAESLEQLRWLEYGYRIRVLQTQQSTIGIDTPEDMEKAIAY 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_CHLPN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chlamydia pneumoniae GN=kdsB PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 2.257e-44 Identity = 98/235 (41.70%), Postives = 143/235 (60.85%), Query Frame = 1 Query: 265 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVT-SLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +G++PAR+ SSR+ GKPL I GK +IQRT+E + ++ LD +VVATDD+ I + FG +MTS +C NGTER E +K K +I+VNIQGDEP + E++D +V+ L+++P+A T V + E+ +VKCV D+ G A+YFSR IP+ + P LH+G+ ++ L Y TPL EDLEQL+ LE+G K+ V VD ++ VD E + + Sbjct: 11 IGVLPARWNSSRYPGKPLAKIHGKSLIQRTYENASQSSLLDKIVVATDDQHIIDHVTDFGGYAVMTSPTCSNGTERTGEVARKYFPKAEIIVNIQGDEPCLNSEVVDALVQKLRSSPEAELVTPVALTTDREEILTEKKVKCVFDSEGRALYFSRSPIPF----ILKKATPVYLHIGVYAFKREALFRYLQHSSTPLSDAEDLEQLRFLEHGGKIHVCIVDAKSPSVDYPEDIAK 241
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_GEOSF (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter sp. (strain FRC-32) GN=kdsB PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 5.027e-44 Identity = 102/239 (42.68%), Postives = 140/239 (58.58%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNP---------QFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVD 945 ++ IIPAR+AS+RFEGK L I GKPM+Q +ER+ A+ + ++VATDDE+I + FG MTS S GT+R E +L+ DI+VN+QGDEPLI+P +ID + L + T T +K D PN VK V D GYA+YFSR +P N K N + H+G+ Y FL + + PT L++ E LEQL+VLENGY++KV++ D E+ GVD Sbjct: 2 KITAIIPARYASTRFEGKALAQIQGKPMVQHVYERTLKASLVSEVIVATDDERIVAAVRAFGGRAEMTSRSHETGTDRLAEVAARLDS--DIIVNVQGDEPLIDPAMIDEAISPLAEDSSLLMGTLKTRIKSLHDFLSPNVVKVVTDWEGYALYFSRSPLP-NFRDKWNDLKDEAFSSRKLLCFKHVGLYVYRREFLLQFAQMSPTYLEMAEKLEQLRVLENGYRIKVVETDFESIGVD 237 The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bpback to top |