DY262919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_ECODH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=kdsB PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 7.031e-38 Identity = 99/240 (41.25%), Postives = 138/240 (57.50%), Query Frame = 1 Query: 265 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD E L R Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_ECOBW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli (strain K12 / BW2952) GN=kdsB PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 7.031e-38 Identity = 99/240 (41.25%), Postives = 138/240 (57.50%), Query Frame = 1 Query: 265 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD E L R Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLER 242
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEAE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas aeruginosa GN=kdsB PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 9.183e-38 Identity = 96/241 (39.83%), Postives = 134/241 (55.60%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDASETLRR 966 +IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+ ++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P+A +T + A F+PN VK D G A+ FSR +P+ + + PY H+GI +Y FL + P L+ E LEQL+ L +G ++ V ++ GVD E L R Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAIATLAEPIHEVSALFNPNVVKVATDIDGLALTFSRAPLPWARDAFARDRDSLPEGVPYRRHIGIYAYRVGFLADFVAWGPCWLENAESLEQLRALWHGVRIHVADARENMLPGVDTPEDLER 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_ESCF3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=kdsB PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 9.183e-38 Identity = 98/240 (40.83%), Postives = 139/240 (57.92%), Query Frame = 1 Query: 265 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDASETLRR 966 V IIPARFAS+R GKPL++I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V + L + + A E+AF+PN VK V+D+ GYA+YFSR IP+++ G +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + GVD +E L R Sbjct: 4 VVIIPARFASTRLPGKPLLDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCGFSDDTVIVNVQGDEPMIPAVIIRQVAENLAQRQVGMATLAAPVHSAEEAFNPNVVKVVLDSEGYALYFSRATIPWDRDRFAKGLETVGDNFLRHLGIYGYRAGFIRRYVNWQPSPLEHIEMLEQLRVLWYGEKIHVAVAEQVPGTGVDTAEDLER 242
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_ECO27 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=kdsB PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 9.183e-38 Identity = 99/240 (41.25%), Postives = 139/240 (57.92%), Query Frame = 1 Query: 265 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP----YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 V IIPAR+AS+R GKPLV+I GKPMI ER++ + + ++VATD E +A + G +V MT ++GTER E ++K D ++VN+QGDEP+I II V L + + AV E+AF+PN VK V+D GYA+YFSR IP+++ V +L HLGI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD E L+R Sbjct: 4 VVIIPARYASTRLPGKPLVDINGKPMIVHVLERAR-ESGAERIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATIPWDRDRFVKDLETVGDNFLRHLGIYGYRAGFIRRYVTWQPSPLEHIEMLEQLRVLWYGEKIHVAVAQEVPGTGVDTPEDLKR 242
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEAB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=kdsB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.046e-37 Identity = 96/241 (39.83%), Postives = 133/241 (55.19%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDASETLRR 966 +IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+ ++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P+A +T + A F+PN VK D G A+ FSR +P+ + + PY H+GI +Y FL + P L+ E LEQL+ L +G ++ V + GVD E L R Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAIATLAEPIHEVSALFNPNVVKVATDIDGLALTFSRAPLPWARDAFARDRDSLPEGVPYRRHIGIYAYRVGFLADFVAWGPCWLENAESLEQLRALWHGVRIHVADARETMLPGVDTPEDLER 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEA8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=kdsB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.046e-37 Identity = 96/241 (39.83%), Postives = 133/241 (55.19%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDASETLRR 966 +IPAR+AS+R GKPL +I G+PMIQR W +++ + +VVATDDE+I CQ FGA+ ++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P+A +T + A F+PN VK D G A+ FSR +P+ + + PY H+GI +Y FL + P L+ E LEQL+ L +G ++ V + GVD E L R Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVVATDDERILAACQGFGAEALLTRAEHNSGTDRLEEVASRLGLASDAIVVNVQGDEPLIPPALIDQVAANLAAHPEAAIATLAEPIHEVSALFNPNVVKVATDIDGLALTFSRAPLPWARDAFARDRDSLPEGVPYRRHIGIYAYRVGFLADFVAWGPCWLENAESLEQLRALWHGVRIHVADARETMLPGVDTPEDLER 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEA7 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=kdsB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.046e-37 Identity = 95/241 (39.42%), Postives = 135/241 (56.02%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKV-DHEAHGVDASETLRR 966 +IPAR+AS+R GKPL +I G+PMIQR W +++ + +V+ATDDE+I CQ FGA+V++T +GT+R E +L D IVVN+QGDEPLI P +ID V L A P++ +T + A F+PN VK D +G A+ FSR +P+ + + PY H+GI +Y FL + P L+ E LEQL+ L +G ++ V + GVD E L R Sbjct: 8 VIPARYASTRLPGKPLQDIAGQPMIQRVWNQAR-KSAASRVVIATDDERILAACQGFGAEVLLTRADHNSGTDRLEEVASRLGLAADAIVVNVQGDEPLIPPALIDQVAANLAAHPESAIATLAEPIHDVAALFNPNVVKVATDVNGLALTFSRAPLPWARDAFAGDRDSLPDGVPYRRHIGIYAYRVGFLADFVAWGPCWLENTESLEQLRALWHGVRIHVADARETMLPGVDTPEDLER 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PELPB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=kdsB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.046e-37 Identity = 90/239 (37.66%), Postives = 144/239 (60.25%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 + V +IPAR SSR + K L ++ G+P+I RTW ++ + + +VVATD +IA GA+V+MTS + GTER EA + +E D+ VN+QGDEPLI PE ID ++ + ST V L+P+D DP++VK V+D G+A+YFSR IP+ ++ + P H+G+ ++ ++ L+ + L P+ L+ E LEQL++LENG++++ + + GV+ E L + Sbjct: 2 KAVILIPARLDSSRLDRKMLADLEGEPLIVRTWRQALKSRLAEKVVVATDSREIAAVLDACGAEVVMTSPTASCGTERIAEAARHIEG--DVFVNLQGDEPLISPENIDLALEPFFSENPPDCSTLVLPLRPDDHVQIEDPHQVKVVMDAKGFALYFSRSAIPFQRN--MRPTTIVYRHIGLYAFSADVLQKFASLPPSMLEEAESLEQLRLLENGFRIQCVTTLVDNPGVNTVEDLEQ 236
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_FRATM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=kdsB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 2.046e-37 Identity = 95/238 (39.92%), Postives = 137/238 (57.56%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDASETLRR 966 +IPAR S+R K L +I GKPMIQR +E+ + D +++ATD +KI + + F A V++T + ++GT+R EA+ KL DIVVN+QGDEPLI E I+ + L +AV ST + ED ++PN VK V D + YA+YFSR IP+ + Q + H+GI +Y FLK Y L +P++ E LEQL+VL NGYK+ + + GVD + L + Sbjct: 7 VIPARLKSTRLPNKMLADIAGKPMIQRVYEQVT-KSKFDSIIIATDSQKIKDIAESFDAKVVLTRDDHQSGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPIENIERAAQLLIDKSEAVVSTLCEKITDVEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSEKEQINISEFFRHIGIYAYRVAFLKHYAELTVSPIEKYEALEQLRVLYNGYKIAIEQSAKSTLAGVDTLQDLEK 243 The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bpback to top |