DY262919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_LEPBJ (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=kdsB PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 7.259e-43 Identity = 104/235 (44.26%), Postives = 135/235 (57.45%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETL 960 +++G+IPAR+ASSRF GKPLV I K MI+ T+ + +T L LVVATDD +I E Q FG + +MT +GT+R E + L +Y I++NIQGDEP IEPE+IDGV + P+ STA L DPNRVK ++D +G AIYFSR LIP + P HLGI YD +FL Y L + L+ E LEQL+ +E GY + V VD L Sbjct: 3 KILGVIPARYASSRFPGKPLVKIGDKTMIEWTYRNASRSTALSELVVATDDTRIHEVVQGFGGNSVMTRADHISGTDRIIE-VANLFSEYSIIINIQGDEPGIEPELIDGVAGLKASHPEWKMSTAAVPLIDFSHGEDPNRVKVIIDRNGKAIYFSRSLIP----SQFKQTVPLYRHLGIYGYDRDFLLKYNSLPKSNLEESESLEQLRAIEAGYGIGVYLAQEAGLSVDTPADL 232
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SYNAS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Syntrophus aciditrophicus (strain SB) GN=kdsB PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 9.481e-43 Identity = 97/238 (40.76%), Postives = 144/238 (60.50%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 ++V IIP+R++SSRF+GKPL ++ GKPMIQ +ER + + + VATDD +I E ++FG IMT+ R+GT+R EA+ L+ K DIVVN+QGD+P+ EPE I V + L+ P +T + + + E+ PN VK V D + A+YFSR IPY + + Y H GI +Y FL+ + L ++ E LEQL+ LE GY+++V++ H++ VD E L R Sbjct: 3 KIVCIIPSRYSSSRFQGKPLADLCGKPMIQHVYERVLKSELVSYAAVATDDSRIFEAVRKFGGKAIMTAARHRSGTDRIAEAVNSLDLKDDDIVVNVQGDQPIFEPEQIAEVTRPLREDPSLPMATLIYRIVREEEITHPNAVKVVFDRNFNALYFSRATIPYVRDDR--HPIAYYKHHGIYAYRRAFLRTFTALEEGTMERLESLEQLRALEFGYRIRVVETLHDSVEVDTPEELAR 238
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHESW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sp. (strain W3-18-1) GN=kdsB PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.617e-42 Identity = 98/238 (41.18%), Postives = 143/238 (60.08%), Query Frame = 1 Query: 262 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 V+ +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + FG V+MTS +GT+R NEA++ L K D+V+N+QGD+PLI+P I+ ++ + P + + + D DP +VK V DN+ YA+YFSR IP+ G+ +P HLGI +Y S F++ + L L+ E LEQL+ LE+G+K+K+ + VD E + + Sbjct: 3 VILLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKATVEGFGGKVVMTSPDAASGTDRINEAIKLLGLKDDDLVINVQGDQPLIDPTAIEQLINLFERQPGEFEMATLGYEIVNKADIDDPMQVKMVFDNNYYALYFSRSRIPF---GRDTQDYPVFKHLGIYAYTSKFVQTFAALPLGRLEDLEKLEQLRALEHGHKIKIAISASNSLEVDRPEDIHK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEPC (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=kdsB PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.617e-42 Identity = 98/238 (41.18%), Postives = 143/238 (60.08%), Query Frame = 1 Query: 262 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 V+ +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + FG V+MTS +GT+R NEA++ L K D+V+N+QGD+PLI+P I+ ++ + P + + + D DP +VK V DN+ YA+YFSR IP+ G+ +P HLGI +Y S F++ + L L+ E LEQL+ LE+G+K+K+ + VD E + + Sbjct: 3 VILLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKATVEGFGGKVVMTSPDAASGTDRINEAIKLLGLKDDDLVINVQGDQPLIDPTAIEQLINLFERQPGEFEMATLGYEIVNKADIDDPMQVKMVFDNNYYALYFSRSRIPF---GRDTQDYPVFKHLGIYAYTSKFVQTFAALPLGRLEDLEKLEQLRALEHGHKIKIAISASNSLEVDRPEDIHK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_GEOLS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=kdsB PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.617e-42 Identity = 95/245 (38.78%), Postives = 142/245 (57.96%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLK-PEDAFDPNRVKCVVDNHGYAIYFSRGLIPY--------NKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 ++V IIPAR+ S+RF GK L ++ GKPMIQ +E++ A+ + +VATDD +IA+ Q G + IMTS GT+R E + L+ DI+VN+QGDEPLI+P +I+ ++ P T + +K D PN VK V DN+GYA+YFSR +P+ + + H+G+ Y NFL Y + T L+L E LEQL+ LENG +++V++ + E+ GVD + L + Sbjct: 2 QIVAIIPARYGSTRFPGKALADLAGKPMIQHVYEQTIRASLVSRAIVATDDRRIADVIHQIGGEAIMTSTDHETGTDRLAEVARGLDA--DIIVNVQGDEPLIDPAMINQAIEPFLGNPGLKMGTLKSRVKCLHDFLSPNVVKVVTDNNGYALYFSRSPLPFFRDKWQDLKDEAFASGRLLCFKHVGLYVYQRNFLLEYAAMPQTFLELSEKLEQLRALENGIRIRVVETEFESLGVDTPDDLNK 244
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_ANADF (3-deoxy-manno-octulosonate cytidylyltransferase OS=Anaeromyxobacter sp. (strain Fw109-5) GN=kdsB PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 1.617e-42 Identity = 97/236 (41.10%), Postives = 144/236 (61.02%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 RV IIPARF + RF GKPL ++ G+P+I +R++ A +D + VATDD +IA + GA I+T + GT+R EA +KL D+VVN+QGDEPLIEPE I+ +V+A++ + +T L+PE+ VK V D HG A+YFSR IP+ ++G V+ H+GI ++ + FL+ + L P L+ EE LEQL+ LE+G++++V + G+D E L R Sbjct: 3 RVAVIIPARFGAQRFPGKPLADLAGQPLIAHVVDRARRARGVDAVAVATDDARIAAAAEAAGAAAILTGPA-STGTDRVAEAARKLMPSPDVVVNLQGDEPLIEPEAIETLVRAMEGGVE--MATLARPLEPEELERTQVVKVVTDRHGDALYFSRAPIPHRRAGGVSAL--ARAHVGIYAFTAAFLQEFAALPPGRLEAEESLEQLRALEHGHRIRVADTAYRGFGIDTPEDLDR 233
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_LEPIN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira interrogans GN=kdsB PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.758e-42 Identity = 103/235 (43.83%), Postives = 135/235 (57.45%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETL 960 +++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+ ST AV L A D NRVK ++D +G AIYFSR LIP + P HLGI YD +FL Y L + L+ E LEQL+ +E GY + + VD L Sbjct: 4 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDVRIHEVVQKFGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPEWAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGIYGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADL 233
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_LEPIC (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=kdsB PE=3 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.758e-42 Identity = 103/235 (43.83%), Postives = 135/235 (57.45%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETL 960 +++G+IPAR+ASSRF GKPL I K MI+ T+ + ++ L LVVATDD +I E Q+FG +MTS +GT+R E + +Y I+VNIQGDEP IEPE+IDGV + P+ ST AV L A D NRVK ++D +G AIYFSR LIP + P HLGI YD +FL Y L + L+ E LEQL+ +E GY + + VD L Sbjct: 4 KILGVIPARYASSRFPGKPLAKIGDKTMIEWTYRNASRSSVLSELVVATDDVRIHEVVQKFGGRSVMTSSDHPSGTDRIIEVANQF-SEYSIIVNIQGDEPGIEPELIDGVASLKASHPEWAMSTAAVPLLDFSHAIDFNRVKVIIDRNGKAIYFSRSLIP----SQFKTTVPLYRHLGIYGYDRDFLLQYNSLPKSNLEESESLEQLRAIEAGYGIGIYLSKEAGLSVDTPADL 233
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_GEOSL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Geobacter sulfurreducens GN=kdsB PE=3 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 2.758e-42 Identity = 97/244 (39.75%), Postives = 139/244 (56.97%), Query Frame = 1 Query: 262 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIPY--------NKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 + IIPARFAS+RF GK L +I GKPM+Q +ER+ A + +VVATDD++IA+ + FG V MTS GT+R E ++ +I+VN+QGDEPLIEP +ID + L P T + ++ D PN VK V D GYA+YFSR +P+ + + H+G+ Y +FL + + PT L+L E LEQL+ LENG +++V++ HE+ GVD L + Sbjct: 3 ITAIIPARFASTRFPGKALADIAGKPMVQHVYERTARARLVSEVVVATDDDRIAQAVRGFGGRVEMTSRDHETGTDRLAEVASRIGA--EIIVNVQGDEPLIEPAMIDEAIAPLAENPAVRMGTLKSRIRTLHDFLSPNVVKVVTDLEGYALYFSRSPLPFFRDKWNDLKDESFASGRLLCYKHVGLYVYRRDFLMEFAKMPPTALELAEKLEQLRALENGCRIRVVETAHESIGVDTPNDLEK 244
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_METFK (3-deoxy-manno-octulosonate cytidylyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=kdsB PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 4.705e-42 Identity = 106/238 (44.54%), Postives = 143/238 (60.08%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSG-----KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960 +IPAR+ASSR GKPL++I GKPM+ R ERS LA+ +VVATD E+I E +G DV+MTS +GT+R E +Q+ + D IVVN+QGDEPLI+P +I V L A +A +TA L + +PN VK V+D G+A+YFSR IPY + + P P H+GI +Y + FL+ Y L P+ ++ E LEQL+VL +GYK+ V I A GVD L Sbjct: 6 VIPARYASSRLPGKPLLDIAGKPMVVRVIERS-LASGAAEVVVATDHERIQEAVSSYGYDVMMTSADHASGTDRIAEVVQQRGWEDDTIVVNVQGDEPLIDPRLIGEVAGNLSAHAEASMATACHVLHDTPSILNPNIVKVVLDQQGHALYFSRAPIPYPRDAFAANQDIPPGMPIYRHIGIYAYRAGFLRAYAALTPSAIEYFESLEQLRVLWHGYKISVEITEKAPASGVDTEADL 242 The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bpback to top |