DY262919

Overview
NameDY262919
Unique NameDY262919
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1297
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBFM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio fischeri (strain MJ11) GN=kdsB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42
Identity = 103/238 (43.28%), Postives = 142/238 (59.66%), Query Frame = 1
Query:  271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966
            IIPAR+ S+R  GKPL +I GKPMIQ  +E++  A   D +++ATDD +I    + FG DV MTS +  +GTER  E ++K     D IVVN+QGDEPLI P II  V + L  +   + + AVT  + +D F+PN VK V D  GYA+YFSR  IP+++     G+     P L H+GI +Y + F+  Y    P+ L+  E LEQL+VL  G K+ V +  +  A GVD  E L +
Sbjct:    6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGDVCMTSPNHESGTERLAEVIEKCGISADEIVVNVQGDEPLIPPSIIQQVAQNLSDSVAPMATLAVTIDEEDDVFNPNAVKVVTDAEGYALYFSRASIPWDRDAFAQGETLTANPLLRHIGIYAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLEK 242          
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBF1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=kdsB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42
Identity = 103/238 (43.28%), Postives = 142/238 (59.66%), Query Frame = 1
Query:  271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966
            IIPAR+ S+R  GKPL +I GKPMIQ  +E++  A   D +++ATDD +I    + FG DV MTS +  +GTER  E ++K     D IVVN+QGDEPLI P II  V + L  +   + + AVT  + +D F+PN VK V D  GYA+YFSR  IP+++     G+     P L H+GI +Y + F+  Y    P+ L+  E LEQL+VL  G K+ V +  +  A GVD  E L +
Sbjct:    6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGDVCMTSPNHESGTERLAEVIEKCGISADEIVVNVQGDEPLIPPSIIQQVAQNLSDSVAPMATLAVTIDEEDDVFNPNAVKVVTDAEGYALYFSRASIPWDRDAFAQGETLTANPLLRHIGIYAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLEK 242          
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHESR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sp. (strain MR-7) GN=kdsB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42
Identity = 96/235 (40.85%), Postives = 140/235 (59.57%), Query Frame = 1
Query:  271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966
            +IPAR+ SSRF GKPL  I GKPMIQ  +ER+ LA  L ++ VATDDE+I    + FG  V+MTS    +GT+R N+A+ +L  K  D+V+N+QGD+PLI+P  I+ V+   +  P    + +     +   +  DP  VK V DN  YA+YFSR  IP+ +  K    +P   HLG+ +Y   F++ +  L    L+  E LEQL+ LE+G+K+KV     ++  VD  E +R+
Sbjct:    6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSIEVDTPEDIRK 237          
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHESM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sp. (strain MR-4) GN=kdsB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42
Identity = 96/235 (40.85%), Postives = 140/235 (59.57%), Query Frame = 1
Query:  271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966
            +IPAR+ SSRF GKPL  I GKPMIQ  +ER+ LA  L ++ VATDDE+I    + FG  V+MTS    +GT+R N+A+ +L  K  D+V+N+QGD+PLI+P  I+ V+   +  P    + +     +   +  DP  VK V DN  YA+YFSR  IP+ +  K    +P   HLG+ +Y   F++ +  L    L+  E LEQL+ LE+G+K+KV     ++  VD  E +R+
Sbjct:    6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSIEVDTPEDIRK 237          
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHESA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sp. (strain ANA-3) GN=kdsB PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42
Identity = 96/235 (40.85%), Postives = 140/235 (59.57%), Query Frame = 1
Query:  271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966
            +IPAR+ SSRF GKPL  I GKPMIQ  +ER+ LA  L ++ VATDDE+I    + FG  V+MTS    +GT+R N+A+ +L  K  D+V+N+QGD+PLI+P  I+ V+   +  P    + +     +   +  DP  VK V DN  YA+YFSR  IP+ +  K    +P   HLG+ +Y   F++ +  L    L+  E LEQL+ LE+G+K+KV     ++  VD  E +R+
Sbjct:    6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSIEVDTPEDIRK 237          
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_ALISL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=kdsB PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.048e-41
Identity = 104/236 (44.07%), Postives = 140/236 (59.32%), Query Frame = 1
Query:  271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960
            IIPAR+ S+R  GKPL +I GKPMIQ  +E++  A   D +++ATDD +I    + FG DV MTS +  +GTER  E + K      +IVVN+QGDEPLI P II  V K L  +   + + AVT  + ED F+PN VK V D  GYA+YFSR  IP+++     G+     P L H+GI +Y + F+  Y    P+ L+  E LEQL+VL  G K+ V +  +  A GVD  E L
Sbjct:    6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGDVCMTSPNHESGTERLAEVIDKCGIASNEIVVNVQGDEPLIPPSIIRQVAKNLADSIAPMATLAVTIDEEEDVFNPNAVKVVTDAEGYALYFSRAAIPWDRDAFAKGEALTANPLLRHIGIYAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTQEDL 240          
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEON (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella oneidensis GN=kdsB PE=3 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.788e-41
Identity = 96/235 (40.85%), Postives = 139/235 (59.15%), Query Frame = 1
Query:  271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966
            +IPAR+ SSRF GKPL  I GKPMIQ  +ER+ LA  L ++ VATDDE+I    + FG  V+MTS    +GT+R N+A+ +L  K  D+V+N+QGD+PLI+P  I+ V+   +  P    + +     +   +  DP  VK V DN  YA+YFSR  IP+ +  K    +P   HLG+ +Y   F++ +  L    L+  E LEQL+ LE G+K+KV     ++  VD  E +R+
Sbjct:    6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKVAISAFDSIEVDTPEDIRK 237          
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBHB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=kdsB PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.335e-41
Identity = 101/236 (42.80%), Postives = 140/236 (59.32%), Query Frame = 1
Query:  271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960
            +IPAR+ASSR  GKPL +I GKPMIQ  +E++  A   D +++ATDD++++   +QFG  V MTS +  +GTER  E ++K+    D IVVN+QGDEPLI P II  V   L      + + AV     E+ F+PN VK V D  GYA+YFSR  IP+++            P +LH+GI +Y + F+  Y    P+ L+  E LEQL+VL  G K+ V +  +  A GVD  E L
Sbjct:    6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDKRVSAAAEQFGGKVCMTSPNHESGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPSIIRQVADNLAGCDAPMATLAVEIESEEEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKTIANPLMLHIGIYAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDL 240          
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEB9 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella baltica (strain OS195) GN=kdsB PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.335e-41
Identity = 94/235 (40.00%), Postives = 140/235 (59.57%), Query Frame = 1
Query:  271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966
            +IPAR+ SSRF GKPL  I GKPMIQ  +ER+ LA  L ++ VATDD++I    + FG  V+MTS    +GT+R N+A+ +L  K  D+V+N+QGD+PLI+P  I+ V+   +  P    + +     +   +  DP  VK V DN+ YA+YFSR  IP+   G+    +P   HLG+ +Y   F++ +  L    L+  E LEQL+ LE G+K+K+     ++  VD  E +R+
Sbjct:    6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALYFSRSRIPF---GRDTQDYPVYKHLGVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRK 237          
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEB8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella baltica (strain OS185) GN=kdsB PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 2.335e-41
Identity = 94/235 (40.00%), Postives = 140/235 (59.57%), Query Frame = 1
Query:  271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966
            +IPAR+ SSRF GKPL  I GKPMIQ  +ER+ LA  L ++ VATDD++I    + FG  V+MTS    +GT+R N+A+ +L  K  D+V+N+QGD+PLI+P  I+ V+   +  P    + +     +   +  DP  VK V DN+ YA+YFSR  IP+   G+    +P   HLG+ +Y   F++ +  L    L+  E LEQL+ LE G+K+K+     ++  VD  E +R+
Sbjct:    6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPEAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKTELDDPMHVKMVFDNNNYALYFSRSRIPF---GRDTQDYPVYKHLGVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRK 237          
The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 397
Match NameE-valueIdentityDescription
KDSB_VIBFM8.026e-4243.283-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_VIBF18.026e-4243.283-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_SHESR8.026e-4240.853-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_SHESM8.026e-4240.853-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_SHESA8.026e-4240.853-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_ALISL1.048e-4144.073-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_SHEON1.788e-4140.853-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_VIBHB2.335e-4142.803-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_SHEB92.335e-4140.003-deoxy-manno-octulosonate cytidylyltransferase OS... [more]
KDSB_SHEB82.335e-4140.003-deoxy-manno-octulosonate cytidylyltransferase OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BC10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bp
TCAAACTTCAAAGCAATTAGGAAGCTTCGTTGAATAAGATGTGGATTGTG
GATCAGTATGCCAGTTTCTCATAGTCGTGTAAAATCAGAATTAGAGAGTG
AGAGAGATTAAAAGATGAGCTCAAAATCAATATGTTCGCCGTCCGAATCT
TCTTCCTCAACAAAGTCGTGGATCGTGCACGGCATTGTAGCCGGAGCAGC
AATTGCTGTTGCCGTCGGTGCGCGCGCCTATCTGGGTCGATCGAAGAACT
TTCGGAGCCGGGTCGTGGGTATCATACCCGCCCGTTTCGCTTCTTCTCGC
TTCGAGGGCAAACCCCTTGTTAATATCCTCGGTAAACCTATGATCCAGAG
AACATGGGAAAGGTCCAAACTGGCAACCACATTGGATCACCTGGTTGTGG
CAACGGATGATGAGAAGATTGCAGAATGCTGCCAACAATTTGGTGCTGAT
GTGATAATGACTTCAGAATCTTGCCGAAATGGTACTGAAAGATGCAACGA
AGCATTACAAAAGCTGGAGAAGAAGTACGATATTGTTGTCAATATTCAGG
GAGATGAACCTCTTATTGAACCAGAGATTATAGATGGTGTTGTGAAAGCT
CTGCAGGCAGCCCCAGATGCAGTGTTCAGTACTGCTGTGACATCTTTAAA
ACCTGAAGATGCATTTGATCCAAATCGGGTGAAATGTGTTGTGGATAATC
ATGGTTATGCCATATATTTTTCAAGGGGATTAATTCCATATAACAAGTCA
GGAAAAGTCAATCCACAATTTCCATATTTGCTTCATCTTGGAATTCAGAG
CTATGACTCAAACTTCCTGAAGATATATCCAGGCCTTCATCCTACTCCCC
TACAACTAGAAGAGGATCTAGAACAGCTGAAAGTCCTTGAGAATGGCTAT
AAGATGAAGGTTATAAAGGTAGACCATGAAGCTCACGGTGTTGATGCTTC
AGAGACGTTGAGAAGATGAATCATTTATGCGTGAGAAAACTTGGTCTAGT
TTTAGTGACTAATCTGATTAAAAAGAAGGATGCAAATTTGCCTGTACAGC
AGTCAGCTGGCTCATGTTAATTAAGTTGGGATGGGGGGGGGGTTCTTTCC
CCCGTGGAGGTCCCTTCCCCGGGAAAAAAATTTTATTTAATTTTGCCTGG
CCGGGGTTTTTCCCATTTTTGGGGAATACCCGGAAGTTTTTTTGGGGGGG
TGCTTTTTGACACCAATTGCTTTTGGGAGAAAAAACAAAATTTTTTAGAA
TTTAAAAAAGGTGTTTTTTATTTTTGTTAAAAAAAATTATTATCTTT
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