DY262919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBFM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio fischeri (strain MJ11) GN=kdsB PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42 Identity = 103/238 (43.28%), Postives = 142/238 (59.66%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 IIPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD +I + FG DV MTS + +GTER E ++K D IVVN+QGDEPLI P II V + L + + + AVT + +D F+PN VK V D GYA+YFSR IP+++ G+ P L H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD E L + Sbjct: 6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGDVCMTSPNHESGTERLAEVIEKCGISADEIVVNVQGDEPLIPPSIIQQVAQNLSDSVAPMATLAVTIDEEDDVFNPNAVKVVTDAEGYALYFSRASIPWDRDAFAQGETLTANPLLRHIGIYAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLEK 242
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBF1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=kdsB PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42 Identity = 103/238 (43.28%), Postives = 142/238 (59.66%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 IIPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD +I + FG DV MTS + +GTER E ++K D IVVN+QGDEPLI P II V + L + + + AVT + +D F+PN VK V D GYA+YFSR IP+++ G+ P L H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD E L + Sbjct: 6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGDVCMTSPNHESGTERLAEVIEKCGISADEIVVNVQGDEPLIPPSIIQQVAQNLSDSVAPMATLAVTIDEEDDVFNPNAVKVVTDAEGYALYFSRASIPWDRDAFAQGETLTANPLLRHIGIYAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDLEK 242
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHESR (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sp. (strain MR-7) GN=kdsB PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42 Identity = 96/235 (40.85%), Postives = 140/235 (59.57%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN YA+YFSR IP+ + K +P HLG+ +Y F++ + L L+ E LEQL+ LE+G+K+KV ++ VD E +R+ Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSIEVDTPEDIRK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHESM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sp. (strain MR-4) GN=kdsB PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42 Identity = 96/235 (40.85%), Postives = 140/235 (59.57%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN YA+YFSR IP+ + K +P HLG+ +Y F++ + L L+ E LEQL+ LE+G+K+KV ++ VD E +R+ Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSIEVDTPEDIRK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHESA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sp. (strain ANA-3) GN=kdsB PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 8.026e-42 Identity = 96/235 (40.85%), Postives = 140/235 (59.57%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN YA+YFSR IP+ + K +P HLG+ +Y F++ + L L+ E LEQL+ LE+G+K+KV ++ VD E +R+ Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSIEVDTPEDIRK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_ALISL (3-deoxy-manno-octulosonate cytidylyltransferase OS=Aliivibrio salmonicida (strain LFI1238) GN=kdsB PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.048e-41 Identity = 104/236 (44.07%), Postives = 140/236 (59.32%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960 IIPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDD +I + FG DV MTS + +GTER E + K +IVVN+QGDEPLI P II V K L + + + AVT + ED F+PN VK V D GYA+YFSR IP+++ G+ P L H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD E L Sbjct: 6 IIPARYQSTRLPGKPLADICGKPMIQWVYEQASKAGA-DRVIIATDDSRIEAVVKGFGGDVCMTSPNHESGTERLAEVIDKCGIASNEIVVNVQGDEPLIPPSIIRQVAKNLADSIAPMATLAVTIDEEEDVFNPNAVKVVTDAEGYALYFSRAAIPWDRDAFAKGEALTANPLLRHIGIYAYRAGFINTYINWQPSVLEKIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTQEDL 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEON (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella oneidensis GN=kdsB PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.788e-41 Identity = 96/235 (40.85%), Postives = 139/235 (59.15%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDDE+I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN YA+YFSR IP+ + K +P HLG+ +Y F++ + L L+ E LEQL+ LE G+K+KV ++ VD E +R+ Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKSAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGYEIVNKAELDDPMHVKMVFDNDYYALYFSRARIPFGRDTK---DYPVYKHLGVYAYTRRFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKVAISAFDSIEVDTPEDIRK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBHB (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=kdsB PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.335e-41 Identity = 101/236 (42.80%), Postives = 140/236 (59.32%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960 +IPAR+ASSR GKPL +I GKPMIQ +E++ A D +++ATDD++++ +QFG V MTS + +GTER E ++K+ D IVVN+QGDEPLI P II V L + + AV E+ F+PN VK V D GYA+YFSR IP+++ P +LH+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD E L Sbjct: 6 VIPARYASSRLPGKPLADIGGKPMIQWVYEQALQAGAED-VIIATDDKRVSAAAEQFGGKVCMTSPNHESGTERLAEVVEKMAIPADHIVVNVQGDEPLIPPSIIRQVADNLAGCDAPMATLAVEIESEEEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKTIANPLMLHIGIYAYRAGFINTYVNWQPSALEQIECLEQLRVLWYGEKIHVEVAKEAPAAGVDTPEDL 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEB9 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella baltica (strain OS195) GN=kdsB PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.335e-41 Identity = 94/235 (40.00%), Postives = 140/235 (59.57%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN+ YA+YFSR IP+ G+ +P HLG+ +Y F++ + L L+ E LEQL+ LE G+K+K+ ++ VD E +R+ Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPDAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALYFSRSRIPF---GRDTQDYPVYKHLGVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEB8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella baltica (strain OS185) GN=kdsB PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.335e-41 Identity = 94/235 (40.00%), Postives = 140/235 (59.57%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN+ YA+YFSR IP+ G+ +P HLG+ +Y F++ + L L+ E LEQL+ LE G+K+K+ ++ VD E +R+ Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPEAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKTELDDPMHVKMVFDNNNYALYFSRSRIPF---GRDTQDYPVYKHLGVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRK 237 The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bpback to top |