DY262919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEB5 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=kdsB PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.335e-41 Identity = 94/235 (40.00%), Postives = 140/235 (59.57%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN+ YA+YFSR IP+ G+ +P HLG+ +Y F++ + L L+ E LEQL+ LE G+K+K+ ++ VD E +R+ Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPEAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALYFSRSRIPF---GRDTQDYPVYKHLGVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEB2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella baltica (strain OS223) GN=kdsB PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.335e-41 Identity = 94/235 (40.00%), Postives = 140/235 (59.57%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L ++ VATDD++I + FG V+MTS +GT+R N+A+ +L K D+V+N+QGD+PLI+P I+ V+ + P + + + + DP VK V DN+ YA+YFSR IP+ G+ +P HLG+ +Y F++ + L L+ E LEQL+ LE G+K+K+ ++ VD E +R+ Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDDRIKAAVEGFGGKVVMTSPEAASGTDRINDAINQLGLKDDDLVINLQGDQPLIDPTSIEQVISLFERHPGEFEMATLGFEIVNKAELDDPMHVKMVFDNNNYALYFSRSRIPF---GRDTQDYPVYKHLGVYAYTRKFVQAFAALPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSIEVDTPEDIRK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_DESOH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=kdsB PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 2.335e-41 Identity = 95/238 (39.92%), Postives = 144/238 (60.50%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTS-LKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 ++ IIP+R+ S+RF GKPL I G PMIQR +++ K A + + VATDD +I E +FG + +MTS +CR+GT+R EA +++ DIVVNIQGD+PLI P+ ID + L + PD +TA + + ++ +P VK V D G+A+YFSR IP+ + + +F HLGI +Y FL I+ L L+ E LEQL+ LE+ +++K + +++ VD E + R Sbjct: 2 KIAAIIPSRYGSTRFAGKPLAPIAGIPMIQRVYDQVKQAICVTDIAVATDDRRIVEAVTRFGGNALMTSAACRSGTDRAAEAAKQMGLAPEDIVVNIQGDQPLIAPQTIDETLAPLLSDPDLGMTTAAFAIMDKQEITNPKDVKMVFDADGFALYFSRSPIPFARD--KDTRFDTFKHLGIYAYTRRFLDIFTQLPNGVLEEIEKLEQLRALEHSHRIKTVVTRYDSPEVDIPEDIPR 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEDO (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=kdsB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 3.983e-41 Identity = 99/241 (41.08%), Postives = 141/241 (58.51%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD----AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +V +IPARF SSRF GKPL I GKPMIQ +ER+ LA LD + VATDD++I + + FG V+MTS + +GT+R N+A+++L D+V+N+QGD+PLI+P I+ +V + P A +T D DP VK V DN A+YFSR IP+ G+ +P HLG+ +Y F+ + L L+ E LEQL+ LE G+K+KV ++ VD E +R+ Sbjct: 2 KVTLLIPARFGSSRFPGKPLAPINGKPMIQHVYERASLAKGLDAIYVATDDDRIKDAVEAFGGKVVMTSAAAASGTDRINDAIEQLGLSDDDLVINLQGDQPLIDPISIEQIVSLFERHPGEFEMATLGFEITDKSELD--DPMHVKMVFDNDFNALYFSRARIPF---GRDTNDYPVYKHLGVYAYTKRFVNAFAKLPLGKLEDLEKLEQLRALEYGHKIKVAISAFDSPEVDTPEDIRK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEHT (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=kdsB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 3.983e-41 Identity = 106/251 (42.23%), Postives = 150/251 (59.76%), Query Frame = 1 Query: 265 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKAL--QAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ-----FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH-----GVDASETLRR*IIY 978 V +IPAR+ASSR GKPL +I GKPMIQ +E++ L+ +V+ATD +K+ + F +DV+MT E ++GTER E + L+ + IVVN+QGDEPL+ PE + V L AP A S A+ + ED F+PN VK V D + A+YFSR IP+++S + Q P+ H+GI +Y + F+K Y L +PL+ E LEQL+VL +GY +K+ +AH GVD E L + I Y Sbjct: 4 VVVIPARYASSRLPGKPLADICGKPMIQHVYEKACLSGA-SKVVIATDHQKVFDAVSTFTSDVLMTREDHQSGTERLAEVVDLLKLDNNTIVVNVQGDEPLLAPENVSQVATLLNESTAPMATLSVAIE--EQEDVFNPNAVKVVSDINKNALYFSRASIPFDRSAMMGEQSTLDLTPFQRHVGIYAYRAGFIKQYIELSVSPLEQLESLEQLRVLYHGYNIKI----EQAHITPQAGVDTPEDLAKVISY 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_DESVV (3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=kdsB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 3.983e-41 Identity = 94/233 (40.34%), Postives = 141/233 (60.52%), Query Frame = 1 Query: 268 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL-HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETL 960 GIIPAR+ASSRF GKPL +ILG+PM ++R++ D + +ATDD +IA+ G +MT+E +GT+R +EA +L D +VVNIQGDEP ++P ++D +V A V +T +L ++A P+RVK VV +G A+YFSR IP+ + G V L H+G+ ++ L+ + L P+ L+ E LEQL++LENG ++V+ + HGVD E + Sbjct: 9 GIIPARYASSRFPGKPLADILGRPMFWHVYDRARRCAAFDEVALATDDARIADAANVLGVPCVMTAEHHPSGTDRVHEAAMRLGVADDAVVVNIQGDEPALDPRMLDQLVAPFADASVRV-ATLAMALSAQEAQSPDRVKVVVAANGDALYFSRADIPFVRDGDVGGDTAGRLGHIGLYAFRMEALRRFTQLPPSRLEQTEKLEQLRLLENGIAIRVVPTTYRTHGVDRPEDI 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBPA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio parahaemolyticus GN=kdsB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 5.202e-41 Identity = 101/237 (42.62%), Postives = 143/237 (60.34%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPED-AFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ----FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960 +IPAR++SSR GKPL +I GKPM+Q +E++ A D +++ATDDE+++ +QFG V MTS + +GTER E ++K+ D I+VN+QGDEPL+ P II V L AA DA +T ++ ED F+PN VK V D GYA+YFSR IP+++ P + H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + A GVD E L Sbjct: 6 VIPARYSSSRLPGKPLADIGGKPMVQWVYEQAMQAGA-DDVIIATDDERVSAAVEQFGGKVCMTSPNHESGTERLAEVVEKMAIPADHIIVNVQGDEPLVPPVIIRQVADNL-AASDAPMATLAVEIESEDEVFNPNAVKVVADERGYAMYFSRATIPWDRDNFAKQDKAIVNPLMRHIGIYAYRAGFINTYVNWAPSALEQIECLEQLRVLWYGEKIHVAVAKEAPAAGVDTPEDL 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_DESVH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=kdsB PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 5.202e-41 Identity = 94/233 (40.34%), Postives = 140/233 (60.09%), Query Frame = 1 Query: 268 GIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL-HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETL 960 GIIPAR+ASSRF GKPL ILG+PM ++R++ D + +ATDD +IA+ G +MT+E +GT+R +EA +L D +VVNIQGDEP ++P ++D +V A V +T +L ++A P+RVK VV +G A+YFSR IP+ + G V L H+G+ ++ L+ + L P+ L+ E LEQL++LENG ++V+ + HGVD E + Sbjct: 9 GIIPARYASSRFPGKPLAEILGRPMFWHVYDRARRCAAFDEVALATDDARIADAANVLGVPCVMTAEHHPSGTDRVHEAAMRLGVPDDAVVVNIQGDEPALDPRMLDQLVAPFADASVRV-ATLAMALSAQEAQSPDRVKVVVAANGDALYFSRADIPFVRDGDVGGDTAGRLGHIGLYAFRMEALRRFTQLPPSRLEQTEKLEQLRLLENGIAIRVVPTTYRTHGVDRPEDI 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB2_ACTP2 (3-deoxy-manno-octulosonate cytidylyltransferase 2 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=kdsB2 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 5.202e-41 Identity = 103/240 (42.92%), Postives = 143/240 (59.58%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK------SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 IIPAR+AS+R KPL++ILGKPMIQ WER+K A +++ATD +IAE +FG +V +TS+ +GTER E + K+ D I+VN+QGDEPLI P II V + L + + AV + ++ F+PN VK + D +G A+YFSR IP+ + S Q YL H+GI +Y + F+K Y PT L+ E LEQL+ L NG K+ + I ++ GVD E L R Sbjct: 6 IIPARYASTRLPRKPLLDILGKPMIQHVWERAKQAGG-HRVIIATDHSEIAEVVTRFGGEVCLTSDKHSSGTERLAEVVSKMNISDDEIIVNVQGDEPLIPPCIIKQVAENLDNHQVNMATLAVKLTQRDELFNPNVVKVLSDKNGMALYFSRAAIPFARDNFPDCSDDFVTQNQYLRHIGIYAYRAGFIKQYVQWQPTALEQLESLEQLRALWNGEKIHLDIALETPEVGVDTQEDLER 244
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_ACTSZ (3-deoxy-manno-octulosonate cytidylyltransferase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=kdsB PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 6.794e-41 Identity = 104/246 (42.28%), Postives = 141/246 (57.32%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------------GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 IIPARFASSR GKPL +I GKPMI+ WE+++ + +VVATD+E++ QFG +V MTSE +GTER E ++KL+ D I+VNIQGDEPLI P I+ V L + S AV ++ F+PN VK + D GY +YFSR IP+N+ + YL H+GI +Y + F+K Y PT L+ E LEQL+VL G ++ V + + A GVD E L + Sbjct: 7 IIPARFASSRLPGKPLADIAGKPMIRHVWEKARRSGA-SRVVVATDNEQVKNAVLQFGGEVCMTSEKHNSGTERLAEVVEKLDIADDEIIVNIQGDEPLIPPVIVQQVAANLAKYRVNMASLAVKIEDVQELFNPNAVKVLTDQAGYVLYFSRAAIPWNRDEFADIAANTKNLDDLRLGDHYLRHIGIYAYRAGFIKRYVQWQPTALEKIESLEQLRVLWYGERIHVELAEEVPAVGVDTPEDLEK 251 The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bpback to top |