DY262919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SODGM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Sodalis glossinidius (strain morsitans) GN=kdsB PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.159e-40 Identity = 100/238 (42.02%), Postives = 143/238 (60.08%), Query Frame = 1 Query: 265 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG----KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960 + IIPARFASSR GKPL +I GKPM+ R ER++ A+ D ++VATD + + E ++ G +V +T ++GTER E + + + D I+VN+QGDEPLI P+II V L A + + AV E+AF+PN VK VVD GYA+YFSR IP+++ G + + L H+GI +Y ++F++ Y +PL+ E LEQL+VL G K+ V + GVD E L Sbjct: 4 IAIIPARFASSRLPGKPLADINGKPMVVRVMERAQ-ASGADRVIVATDHQGVVEAVERAGGEVYLTRPDHQSGTERLQEVIDRYDFPDDRIIVNVQGDEPLIPPQIILQVADNLAGAEAGMATLAVPITTAEEAFNPNAVKVVVDARGYALYFSRATIPWDREGFARSREHLSHSLLRHIGIYAYRADFIRRYVSWSASPLEKIEILEQLRVLWYGEKIHVAVSSVAPGMGVDTPEEL 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_MARMM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Maricaulis maris (strain MCS10) GN=kdsB PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 1.159e-40 Identity = 96/243 (39.51%), Postives = 137/243 (56.38%), Query Frame = 1 Query: 262 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKC--------VVDNHGY-AIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH---EAHGVDASE 954 V+ +IPAR+ S+RF GKPL I G+ MI+R W + +D +VVATDD++I + G + +MT CRNGTER +A+++L DIV+N+QGD PLI P +I GV + L+A P +T +L PE K VV N A+YFS+ +IP+ + K + P H+G+ Y + L+ L PTP +L E LEQL+ LENG ++V+ D+ A VDA E Sbjct: 3 VLAVIPARYGSTRFPGKPLAMIAGQMMIERVWRIAAAVPGVDRVVVATDDQRIMDAVAAAGGEAVMTDPDCRNGTERALDAVKRLNSDADIVINVQGDAPLIPPWVIGGVAETLRADPSLQMATPAIALPPETEARMRADKANGSASGTTVVFNKAMDAMYFSKNVIPFRR--KPDEGAPTYQHIGLYGYRRDTLEGLVALEPTPFELTESLEQLRALENGIPIRVVLTDYRGRSAWSVDAPE 243
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEPA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=kdsB PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.514e-40 Identity = 98/234 (41.88%), Postives = 139/234 (59.40%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQA-APDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLR 963 +IPAR+ SSRF GKPL +I GKPMIQ +ER+ LA L + VATDD +I + FG V+MT E+ +GT+R +EA+ L D+V+N+QGD+PLI+P +I+ +V + A + +T +K E DPN VK V DN+ A+YFSR IP+ G+ +P H+GI +Y F++ + L L+ E LEQL+ LE GYK+KV + VD E +R Sbjct: 6 LIPARYGSSRFPGKPLAHINGKPMIQHVYERASLAKGLKDIYVATDDVRIKNAVESFGGKVVMTGENAASGTDRIDEAISILGLADDDLVINLQGDQPLIDPIVIEQLVSVCERHAGEFDMATLGVEIKDEAQLNDPNHVKVVFDNNHNALYFSRARIPF---GRDTSDYPVYKHIGIYAYTRKFIQTFAKLPLGRLEELEKLEQLRALEYGYKIKVAISAFDFPEVDTPEDIR 236
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_BACV8 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) GN=kdsB PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.977e-40 Identity = 99/243 (40.74%), Postives = 143/243 (58.85%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDP----NRVKCVVDNHGYAIYFSRGLIPYNKSGKVN---PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 + +GIIPAR+AS+RF KPL + GKP+IQR +E+ ++ LD VATDDE+I + FG V+MTS ++GT+RC EA K+ + YD+VVNIQGDEP I+ ++ VKA P +T V P+D + N K VV + A+YFSR +IP+ ++ + Y H+G+ +Y ++ LK L + L+L E LEQL+ LENGY +KV + E G+D + L R Sbjct: 2 KFIGIIPARYASTRFPAKPLAVLGGKPVIQRVYEQ--VSGILDEAYVATDDERIESAVKAFGGKVVMTSVHHKSGTDRCYEAYTKVGRGYDVVVNIQGDEPFIQKSQLE-AVKACFEDPATQIATLVKPFIPDDGLEALENVNSPKVVVGKNMNALYFSRSIIPFQRNVEKEGWLKGHTYYKHIGLYAYRADVLKEITSLPQSSLELAESLEQLRWLENGYTIKVGISEVETIGIDTPQDLAR 241
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBVY (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio vulnificus (strain YJ016) GN=kdsB PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.582e-40 Identity = 102/238 (42.86%), Postives = 143/238 (60.08%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQA--APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960 +IPAR+ S+R GKPL +I GKPM+Q +E++ A D +++ATDD+++A+ FG V MTS + +GTER E +Q + D IVVN+QGDEPLI P II V + L A AP A A+TS E+ F+PN VK V D GYA+YFSR IP+++ G+V + + H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + GVD E L Sbjct: 6 VIPARYQSTRLPGKPLADIAGKPMVQWVYEQAIQAGAQD-VIIATDDQRVADAVAVFGGKVCMTSPNHESGTERLAEVVQLMGIADDHIVVNVQGDEPLIPPSIIRQVAENLAASSAPMATLGVAITS--EEEVFNPNAVKVVTDKEGYALYFSRATIPWDRDAFARGEVLTEHSLMRHIGIYAYRAGFINTYVNWQPSSLEKIECLEQLRVLWYGEKIHVELAKEAPPAGVDTPEDL 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBVU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio vulnificus GN=kdsB PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.582e-40 Identity = 102/238 (42.86%), Postives = 143/238 (60.08%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQA--APDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960 +IPAR+ S+R GKPL +I GKPM+Q +E++ A D +++ATDD+++A+ FG V MTS + +GTER E +Q + D IVVN+QGDEPLI P II V + L A AP A A+TS E+ F+PN VK V D GYA+YFSR IP+++ G+V + + H+GI +Y + F+ Y P+ L+ E LEQL+VL G K+ V + + GVD E L Sbjct: 6 VIPARYQSTRLPGKPLADIAGKPMVQWVYEQAIQAGAQD-VIIATDDQRVADAVAVFGGKVCMTSPNHESGTERLAEVVQLMGIADDHIVVNVQGDEPLIPPSIIRQVAENLAASSAPMATLGVAITS--EEEVFNPNAVKVVTDKEGYALYFSRATIPWDRDAFARGEVLTEHSLMRHIGIYAYRAGFINTYVNWQPSSLEKIECLEQLRVLWYGEKIHVELAKEAPPAGVDTPEDL 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_HAES2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus somnus (strain 2336) GN=kdsB PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.582e-40 Identity = 102/244 (41.80%), Postives = 141/244 (57.79%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----------GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 IIPAR+ASSR GKPL +I GKPMIQ WE+++ + +VVATD E++A + F +V MTS +GTER E ++KL D I+VNIQGDEPLI P I+ V + LQ + + AV E+ F+PN VK + D GY +YFSR +IP+++ ++ Y H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + A GVD E L + Sbjct: 6 IIPARYASSRLPGKPLADIAGKPMIQHVWEKAQQSGAT-RVVVATDYEEVARAVRGFDGEVCMTSSQHNSGTERLAEVIEKLAVPDDEIIVNIQGDEPLIPPVIVSQVAQNLQKYQVNMATLAVKIEDVEELFNPNVVKVLTDKDGYVLYFSRAVIPWDRDQFVQLGKADLSQLQLHQHYFRHIGIYAYRAGFIKQYVQWQPTTLEQIERLEQLRVLWNGERIHVELAKQAPAVGVDTVEDLEK 248
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_CYTH3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=kdsB PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 2.582e-40 Identity = 94/240 (39.17%), Postives = 139/240 (57.92%), Query Frame = 1 Query: 262 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF----PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +V IIPAR+AS+RF GKPL+ I GK MIQ +++ + + ++VATDD++I +FG V+ T +GT+RC EA QKL K +D ++N+QGDEP I+PE I + L PD +T + ++ E+ F+PN K +V+ +G AIYFSR IPY + + + H+G+ +Y + L L P+ L+L E LEQL+ LE+GY + E G+D E L R Sbjct: 7 IVAIIPARYASTRFPGKPLIQINGKTMIQCVYDQVRSTPEITEVLVATDDDRIEAEVLRFGGKVVRTLPEHPSGTDRCFEAYQKLNKPFDFIINVQGDEPFIQPEQIRTLAGIL--TPDVELATLIKKIEDEETLFNPNTPKVLVNANGEAIYFSRQTIPYLRQHADKKDWLANHTFFKHIGMYAYRPDILAQITQLKPSALELAESLEQLRWLESGYSIHTAVTTIETVGIDTPEDLLR 244
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEHH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=kdsB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 4.404e-40 Identity = 98/235 (41.70%), Postives = 138/235 (58.72%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLR 963 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L + VATDDE+I + FG V+MT +GT+R ++A+ +L D+V+N+QGD+PLI+P I+ +V + P F A ++ D DPN VK V DN+ A+YFSR IP+ G+ + +P HLGI +Y F++ + L L+ E LEQL+ LE GYK+KV ++ VD E +R Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLKDIYVATDDERIKNAVEGFGGKVVMTGADAASGTDRIDDAITQLGLADDDLVINLQGDQPLIDPISIEQLVSLCERHP-GEFDMATLGVEIRDEAQINDPNHVKMVFDNNFNALYFSRATIPF---GRESSDYPVYKHLGIYAYTRKFIQTFAKLPLGRLEDLEKLEQLRALEYGYKIKVAISAFDSPEVDTPEDIR 236
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEA6 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=kdsB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 4.404e-40 Identity = 100/241 (41.49%), Postives = 144/241 (59.75%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEK-KYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF------PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 IIPAR+AS+RF GKPLV I GKPM+Q ++R+ + + +++VATDD +IA+ FG MT +GTER E ++ + +IVVN+QGDEP I E I V + L A +T AV + E+AF+PN VK V+D GYA+YF+R IPY+++ ++ YL H+GI +Y + F+K Y + P+ L+ E LEQL+VL +G K+ V I G+D E L+R Sbjct: 6 IIPARYASTRFPGKPLVEINGKPMVQHVYDRA-IESGASNVIVATDDARIAKAVSDFGGKYCMTGAHHESGTERLAEVVEMQDMLSQEIVVNVQGDEPFIPAENIQQVAENLHHHQQAEMATLAVKIVDVEEAFNPNAVKVVLDKQGYAMYFTRATIPYDRARFLDEDIIDEIGDYYLRHVGIYAYRAGFIKQYVNMSPSGLEQIESLEQLRVLWHGEKIHVDIARKTPPAGIDTPEDLKR 245 The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bpback to top |