DY262919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PASMU (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pasteurella multocida GN=kdsB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 4.404e-40 Identity = 102/246 (41.46%), Postives = 146/246 (59.35%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS------------GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 IIPAR+AS+R GKPL I GKPMI +E++ + + ++VATD E++A + FGA+V MTSE+ ++GTER E ++KL D I+VNIQGDEPLI P I+ V + L + S AV PE+ F+PN VK + D+ GY +YFSR IP+++ G++ YL H+GI +Y + F+K Y P+ L+ E LEQL+VL G K+ V + + GVD +E L + Sbjct: 7 IIPARYASTRLPGKPLAEIAGKPMIAHVFEKA-MQSGAKRVIVATDHEQVATVARGFGAEVCMTSETHQSGTERLAEVVEKLGIAEDEIIVNIQGDEPLIPPAIVRQVAENLAKYQVKMASLAVNITDPEELFNPNAVKVLTDHAGYVLYFSRAPIPWHRDQFASLPKEKSTRGQLVLSDHYLRHIGIYAYRAGFIKQYIQWQPSVLEQIESLEQLRVLWYGEKIHVELAREVPPVGVDTAEDLEK 251
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_HAES1 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Haemophilus somnus (strain 129Pt) GN=kdsB PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 4.404e-40 Identity = 101/244 (41.39%), Postives = 141/244 (57.79%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKS----------GKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 IIPAR+ASSR GKPL +I GKPMIQ WE+++ + +VVATD E++A + F +V MTS +GTER E ++KL D I+VNIQGDEPL+ P I+ V + LQ + + AV E+ F+PN VK + D GY +YFSR +IP+++ ++ Y H+GI +Y + F+K Y PT L+ E LEQL+VL NG ++ V + A GVD E L + Sbjct: 6 IIPARYASSRLPGKPLADIAGKPMIQHVWEKAQQSGAT-RVVVATDYEEVARAVRGFDGEVCMTSSQHNSGTERLAEVIEKLAIPDDEIIVNIQGDEPLVPPVIVSQVAQNLQKYQVNMATLAVKIEDVEELFNPNVVKVLTDKDGYVLYFSRAVIPWDRDQFVQLGKADLSQLQLHQHYFRHIGIYAYRAGFIKQYVQWQPTTLEQIERLEQLRVLWNGERIHVELAKQAPAVGVDTVEDLEK 248
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEWM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=kdsB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 5.752e-40 Identity = 95/234 (40.60%), Postives = 139/234 (59.40%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLR 963 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L + VATDD++I E + FG V+MT +GT+R +A+ +L K D++VN+QGD+PLI+P I+ V+ + P ++ + V + + DP VK V DN+ A+YFSR IP+ G+ +P HLGI +Y +F+ + L L+ E LEQL+ LE+G+K+KV ++ VD E +R Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTAIYVATDDDRIKEAVEAFGGKVVMTDPQAASGTDRIEDAITQLGLKDDDLIVNLQGDQPLIDPISIEQVITLFERHPGEFSMATLGVEITEKAELDDPKHVKMVFDNNFNALYFSRARIPF---GRDTNDYPVYKHLGIYAYTRSFISTFAKLPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSPEVDTPEDIR 236
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSE14 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=kdsB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 5.752e-40 Identity = 99/241 (41.08%), Postives = 139/241 (57.68%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+V++T E +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD E L R Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAEVLLTREDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGMSTLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDELPAGVPYRRHIGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLER 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_BACTN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Bacteroides thetaiotaomicron GN=kdsB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 5.752e-40 Identity = 98/242 (40.50%), Postives = 142/242 (58.68%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF----DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQF---PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLR 963 + +GIIPAR+AS+RF KPL + GK +IQR +E+ +A LD VATDDE+I + FG V+MTS ++GT+RC EA K+ +D+VVNIQGDEP I+P ++ VKA P +T V ++ F + N K V++ + A+YFSR +IP+ ++ Y H+G+ +Y + LK L + L+L E LEQL+ LENGYK+KV D E G+D + L+ Sbjct: 2 KFLGIIPARYASTRFPAKPLAMLGGKTVIQRVYEQ--VAGILDDAYVATDDERIEAAVKAFGGKVVMTSIDHKSGTDRCYEACTKIGGDFDVVVNIQGDEPFIQPSQLN-AVKACFEDPTTQIATLVKPFTADEPFAVLENVNSPKVVLNKNWNALYFSRSIIPFQRNADKEDWLKGHTYYKHIGLYAYRTEVLKEITALPQSSLELAESLEQLRWLENGYKIKVGISDVETIGIDTPQDLK 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEPG (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas putida (strain GB-1) GN=kdsB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 7.512e-40 Identity = 102/241 (42.32%), Postives = 140/241 (58.09%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIP-----YNKSGKVNPQ-FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 +IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+V+MT +GT+R E + L D IVVN+QGDEPLI P IID V L A P+A +T + +PE F+PN VK V D +G A+ FSR +P + K V P+ PY H+G+ +Y FL+ + P L+ E LEQL+ L +G ++ V ++ A GVD E L R Sbjct: 8 VIPARLRSTRLPGKPLLPIAGKPMVQHVWEQARRSGA-SRVVIATDDASILEACQAFGAEVLMTRADHESGTDRLAEVVAHLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHEPETVFNPNAVKVVSDKNGLALTFSRAPLPWARDAFAKDRNVLPEGVPYRRHIGMYAYRVGFLQDFVSWGPCWLEQTEALEQLRALWHGVRIHVEDAIEAPAVGVDTPEDLER 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEMY (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas mendocina (strain ymp) GN=kdsB PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 7.512e-40 Identity = 103/241 (42.74%), Postives = 141/241 (58.51%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLI-----PYNKSGKVNPQ-FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDASETLRR 966 +IPAR+AS+R GKPL +I GKPM+Q WE++K ++ +VVATDD +I E C+ FGA+V++T E +GT+R E +L D IVVN+QGDEPL+ P IID V L P A +T ++ A F+PN VK V D G A+ FSR + + KS V P PY H+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ A GVD +E L R Sbjct: 8 VIPARYASTRLPGKPLQDIAGKPMVQHVWEQAK-KSSASRVVVATDDARIVEACKVFGAEVLLTREDHNSGTDRLAEVATQLGLPADAIVVNVQGDEPLVPPSIIDQVAANLATNPQAGIATLAEPIEDVTALFNPNVVKVVADKSGLALTFSRAPLAWARDAFAKSRDVLPAGVPYRRHIGIYAYRAGFLHDFVAWGPCWLEDTECLEQLRALYNGVRIHVADALEAPAAGVDTAEDLER 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHESH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=kdsB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 9.811e-40 Identity = 97/236 (41.10%), Postives = 137/236 (58.05%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD----AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLR 963 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L + VATDD++I + + FG V+MTS +GT+R +A+ +L K D+VVN+QGD+PLI+P I+ ++ + P A +T D DP VK V DN A+YFSR IP+ G+ +P HLG+ +Y +F+ + L L+ E LEQL+ LE+GYK+KV ++ VD E +R Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTAIYVATDDDRIKDAVEGFGGKVVMTSPDAASGTDRIEDAITQLGLKDDDLVVNLQGDQPLIDPISIEQIISLFERHPGEFGMATLGFEITEKCELD--DPKHVKMVFDNEFNALYFSRARIPF---GRDTNDYPVYKHLGVYAYTRSFISTFAKLPLGRLEDLEKLEQLRALEHGYKIKVAISAFDSPEVDTPEDIR 236
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEFN (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=kdsB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 9.811e-40 Identity = 95/240 (39.58%), Postives = 138/240 (57.50%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLK---PEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +V +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA LD + VATDD++I + + FG V+MTS +GT+R N+A+ L D+V+N+QGD+PLI+P I+ ++ + P F A + + DP VK V DN A+YFSR IP+ G+ +P HLG+ +Y F+ + L L+ E LEQL+ LE G+K+K+ ++ VD E +R+ Sbjct: 2 KVTLLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLDSIYVATDDDRIKDAVESFGGKVVMTSPDAASGTDRINDAIALLGLNDDDLVINLQGDQPLIDPISIEQIISLFERHP-GEFEMATLGFEIVDKRELDDPMHVKMVFDNDHNALYFSRSRIPF---GRDTNDYPVYKHLGVYAYTKRFVNAFAKLPLGRLEDLEKLEQLRALEYGHKIKIAISAFDSPEVDTPEDIRK 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEAM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=kdsB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 9.811e-40 Identity = 96/236 (40.68%), Postives = 138/236 (58.47%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF---DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L+ + VATDDE+I + + FG V+MT +GT+R +A+ +L D+V+N+QGD+PLI+P I+ +V+ + P F A + D DP VK V DN YA+YFSR IP+ G+ ++P HLG+ +Y F+ + L L+ E LEQL+ LE G+++KV ++ VD E +RR Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERAALAKGLNAIYVATDDERIKDAVESFGGKVVMTGADAASGTDRIEDAITQLGLADDDLVINLQGDQPLIDPISIEQIVELFRRHP-GEFEMATLGYQISDKAELDDPKHVKMVFDNDMYALYFSRACIPF---GRDVSEYPVYKHLGVYAYTRRFVHTFNSLPLGRLEDLEKLEQLRALEYGHRIKVAISAFDSPEVDTPEDIRR 237 The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bpback to top |