DY262919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_FRAP2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=kdsB PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 9.811e-40 Identity = 95/219 (43.38%), Postives = 133/219 (60.73%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP---YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV 912 +IPAR S+R GK L +I GKPMIQR +E+ + +++ATD ++I E + FGA VI+T + +GT+R EA+ KL DIVVN+QGDEPLI E I+ + L P+AV ST + + ED ++PN VK V D + YA+YFSR IP+ + N Q + H+GI +Y FLK Y L +P++ E LEQL+VL NGYK+ + Sbjct: 7 VIPARLKSTRLPGKMLADIAGKPMIQRVYEQVA-KSKFKSIIIATDSQEIKEVAENFGAKVILTRDDHESGTDRIAEAVTKLGFADEDIVVNVQGDEPLIPVENIEQAAQLLIEKPEAVVSTLCERITEAEDIYNPNNVKVVFDKNNYALYFSRASIPFERGFSENHQVSISEFFRHIGIYTYRVGFLKHYAELAISPIEKYEALEQLRVLYNGYKIAI 224
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBCM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio cholerae serotype O1 (strain M66-2) GN=kdsB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.281e-39 Identity = 101/237 (42.62%), Postives = 141/237 (59.49%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960 +IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A + + AV + F+PN VK + D GYA+YFSR IP++ K+ K Q P L H+GI +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD E L Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDL 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBCH (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio cholerae GN=kdsB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.281e-39 Identity = 101/237 (42.62%), Postives = 141/237 (59.49%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960 +IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A + + AV + F+PN VK + D GYA+YFSR IP++ K+ K Q P L H+GI +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD E L Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDL 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VIBC3 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=kdsB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.281e-39 Identity = 101/237 (42.62%), Postives = 141/237 (59.49%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYN-----KSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETL 960 +IPAR+ S+R GKPL +I GKPMIQ +E++ A D +++ATDDE++ + Q FG V MTS + ++GTER E + K+ D IVVN+QGDEPLI P II V L A + + AV + F+PN VK + D GYA+YFSR IP++ K+ K Q P L H+GI +Y + F+ Y P+ L+ E LEQL+VL +G K+ V + ++ GVD E L Sbjct: 6 VIPARYQSTRLPGKPLADIGGKPMIQWVYEQAMQAGA-DRVIIATDDERVEQAVQAFGGVVCMTSPNHQSGTERLAEVVAKMAIPADHIVVNVQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ-PLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQLRVLWHGEKIHVAVALEAPPAGVDTPEDL 240
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEU2 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=kdsB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.281e-39 Identity = 98/241 (40.66%), Postives = 139/241 (57.68%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDA-FDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDASETLRR 966 +IPAR+ SSRF GKPL I GKPM+Q WE++ ++ + +V+ATDD +I E CQ FGA+V++T + +GT+R E +L D IVVN+QGDEP+I P +ID V L A P+A ST + A F+PN VK D +G A+ FSR +P+ + ++ PY H+GI +Y + FL + P L+ E LEQL+ L NG ++ V ++ GVD E L R Sbjct: 8 VIPARYGSSRFPGKPLKTIAGKPMVQLVWEQA-CKSSAERVVIATDDARIVEACQAFGAEVLLTRDDHNSGTDRLAEVAAQLGLAADAIVVNVQGDEPMIPPAVIDQVASNLAAHPEAGMSTLAEPIDDVAALFNPNIVKVATDINGLALTFSRAPLPWARDALAANRDQLPAGVPYRRHIGIYAYRAGFLHDFVSWGPCWLENTESLEQLRALWNGVRIHVADALEAPPGGVDTPEDLER 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEPF (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=kdsB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.281e-39 Identity = 101/241 (41.91%), Postives = 144/241 (59.75%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKP-EDAFDPNRVKCVVDNHGYAIYFSRGLIP-----YNKSGKVNPQ-FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDASETLRR 966 +IP+R+AS+R GKPL++I GKPMIQ WE++ ++ +VVATDD +I E C+ FGA+V++T E +GT+R E KL + D IVVN+QGDEPLI P +ID V L A +A +T ++ E F+PN VK V D +G A+ FSR +P + K V P+ PY H+GI +Y + FL+ + P L+ E LEQL+ L +G ++ V + GVD +E L R Sbjct: 8 VIPSRYASTRLPGKPLLDIAGKPMIQHVWEQAS-KSSASRVVVATDDARIVEACKAFGAEVVLTREDHNSGTDRLAEVAAKLGLEPDAIVVNVQGDEPLIPPSVIDQVAANLAAHTEARMATLAEPIEDVETLFNPNVVKVVSDLNGLALTFSRATLPLARDAFAKRRDVLPEGVPYRRHIGIYAYRAGFLQDFVSWGPCWLENTESLEQLRALWHGVRIHVADALIAPPTGVDTAEDLER 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_MANSM (3-deoxy-manno-octulosonate cytidylyltransferase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=kdsB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.281e-39 Identity = 104/246 (42.28%), Postives = 145/246 (58.94%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK-------SGKVNPQ-----FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 IIPARFASSR GKPL +I GKPMI E+++L+ +VVATD+E++ + +QFG +V MTS +GTER E ++ L D I+VNIQGDEPLI P I+ V + L + S AV + + F+PN VK + D GY +YFSR IP+N+ SG++ + YL H+GI +Y + F+K Y P+ L+ E LEQL+VL G K+ V + + A GVD +E L + Sbjct: 7 IIPARFASSRLPGKPLADIAGKPMIIHVLEKARLSGAT-RVVVATDNEEVKQAVEQFGGEVCMTSAKHNSGTERLAEVVETLNIPDDEIIVNIQGDEPLIPPVIVSQVAENLCKFKVNMASLAVKIHESAELFNPNAVKVLTDKDGYVLYFSRAPIPWNRDAFARLNSGELKQEELDLADHYLRHIGIYAYRAGFIKQYVQWEPSALEQIESLEQLRVLWYGEKIHVELAKEIPAVGVDTAEDLEK 251
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_CHRVO (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chromobacterium violaceum GN=kdsB PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 1.281e-39 Identity = 100/240 (41.67%), Postives = 132/240 (55.00%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQ------FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDH-EAHGVDASETLRR 966 +IPAR ASSR GKPL +I GKPM+ R E++ + +VVATD I C G + ++T E +GT+R E KL D +VVN+QGDEPLI+PE+I+ + + L A V + A D F+PN VK +D HG A+YFSR IPY + + P H+G+ Y + FL Y GL P PL+ E LEQL+VL +GY + V D A GVD E L R Sbjct: 7 VIPARMASSRLPGKPLADIAGKPMVVRVAEQAAKSRAA-RVVVATDHADILAACAAHGVEAVLTREDHASGTDRLAEVAAKLALPDDALVVNVQGDEPLIQPELINRLAELLAGADAPVATLAHALHDAADHFNPNVVKVALDKHGRALYFSRAPIPYARDAYAADRSALPAGLPVYRHIGMYGYRAGFLAAYAGLEPGPLEQYEALEQLRVLWHGYGIAVALADEAPAAGVDTPEDLER 245
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_SHEPW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=kdsB PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 1.673e-39 Identity = 93/234 (39.74%), Postives = 138/234 (58.97%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPD--AVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLR 963 +IPAR+ SSRF GKPL I GKPMIQ +ER+ LA L + VATDD++I + + FG V+MTS +GT+R +A+ +L + D+VVN+QGD+PLI+P I+ ++ + P + + + E+ DP VK V DN A+YFSR IP+ G+ +P HLG+ +Y F++ + L L+ E LEQL+ LE+G+K+KV ++ VD E +R Sbjct: 6 LIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTDIYVATDDDRIKDAVEGFGGKVVMTSAEAASGTDRIEDAITQLGLAEDDLVVNLQGDQPLIDPISIEQIISLFERHPGEFGMATLGFQITEEEELNDPKHVKLVFDNEFNALYFSRARIPF---GRDTDDYPVYKHLGVYAYTRKFVQTFAKLPLGRLEDLEKLEQLRALEHGHKIKVAISAFDSPEVDTPEDIR 236
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_KLEP7 (3-deoxy-manno-octulosonate cytidylyltransferase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=kdsB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.186e-39 Identity = 101/240 (42.08%), Postives = 140/240 (58.33%), Query Frame = 1 Query: 265 VGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK----SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 V IIPARFAS+R GKPL +I GKPMI ER++ + D ++VATD E +A + G +V MT ++GTER E ++K D I+VNIQGDEP+I P I+ V + L A+ + + AV E+AF+PN VK V+D GYA+YFSR IP+++ + L H+GI Y + F++ Y P+PL+ E LEQL+VL G K+ V + + GVD E L R Sbjct: 4 VVIIPARFASTRLPGKPLQDINGKPMIVHVLERAR-ESGADRIIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTIIVNIQGDEPMIPPAIVRQVAENLAASSSGMATLAVPIHDAEEAFNPNAVKVVMDAKGYALYFSRATIPWDRDRFAQSRETIGDSLLRHIGIYGYRAGFIRRYVSWAPSPLEQIEMLEQLRVLWYGEKIHVAVAAEVPGTGVDTPEDLER 242 The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bpback to top |