DY262919
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_CHRSD (3-deoxy-manno-octulosonate cytidylyltransferase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=kdsB PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 2.186e-39 Identity = 100/246 (40.65%), Postives = 147/246 (59.76%), Query Frame = 1 Query: 256 SRVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG-KVNPQF----PYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAH--GVDASETLRR 966 S VV +IPAR+ +SR GKPL+++ G+PMI R W+R+ + +V+ATDDE+I Q +GADV++T+ +GT+R E +LE D IVVN+QGDEPL+ P +ID VV+ L A +T + E F+PN VK V D HG A+YFSR +P+++ P +L H+G+ +Y + FL Y P+PL+ E LEQL+ + +G++++V + EAH GVD L R Sbjct: 2 SDVVVVIPARYGASRLPGKPLLDLHGEPMIARVWQRA-CKSDATRVVIATDDERIEAAMQPYGADVMLTAPDHPSGTDRLAEVAARLELDADTIVVNVQGDEPLLPPALIDQVVRRLADDTTASIATLAEPIGDVETLFNPNVVKVVRDLHGRALYFSRAPVPWDREHFATRPDCLATDAWLRHIGLYAYRAGFLAAYVDWLPSPLEQLEQLEQLRAMHHGHRIQV-ALAAEAHPAGVDTEADLAR 245
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_PSEPW (3-deoxy-manno-octulosonate cytidylyltransferase OS=Pseudomonas putida (strain W619) GN=kdsB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.854e-39 Identity = 101/241 (41.91%), Postives = 139/241 (57.68%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIP-----YNKSGKVNPQ-FPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVI-KVDHEAHGVDASETLRR 966 +IPAR S+R GKPL+ I GKPM+Q WE+++ + +V+ATDD I E CQ FGA+V+MT +GT+R E +L D IVVN+QGDEPLI P IID V L A P+A +T + PE F+PN VK V D +G A+ FSR +P + K PQ PY H+G+ +Y FL+ + P L+ E LEQL+ L +G ++ V ++ A GVD ++ L R Sbjct: 8 VIPARLRSTRLPGKPLLLIAGKPMVQHVWEQARKSGA-GRVVIATDDASIVEACQAFGAEVLMTRADHESGTDRLAEVAAQLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHDPETVFNPNAVKVVSDKNGLALSFSRAPLPWARDAFAKDRNQLPQGVPYRRHIGMYAYRVGFLQDFVSWGPCWLEQTEALEQLRALWHGVRIHVADAIEAPAVGVDTAQDLER 247
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_BDEBA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Bdellovibrio bacteriovorus GN=kdsB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.854e-39 Identity = 94/238 (39.50%), Postives = 137/238 (57.56%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNK--SGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 ++VG+IPARF S+RF GKPLVN+ G+P+IQ T E +K + L ++VATD E I + G V+MT G++R N A++ + D+VVNIQGDEPL+ E+ID + + P +T + E+ N VK VV+ A+YFSR +PY++ + + L H+G+ +Y NFLK + P ++ E LEQL+ L G K+KVI+V + GVD E L R Sbjct: 2 KIVGVIPARFGSTRFPGKPLVNLKGRPLIQWTVEGAKKSKLLSEVIVATDHEGIKAAAEAVGVKVVMTDSDLPTGSDRINAAIK--DVACDVVVNIQGDEPLVTGELIDRLAQVFVDDPKMDMATLAHPISAEELQSMNSVKVVVNCRDEALYFSRYPMPYSRMSAQEAGSMDGCLKHIGMYAYSRNFLKQFCEAPPALIEKAESLEQLRALYLGAKIKVIRVKEASVGVDTPEDLAR 237
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_AZOSE (3-deoxy-manno-octulosonate cytidylyltransferase OS=Azoarcus sp. (strain EbN1) GN=kdsB PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.854e-39 Identity = 101/241 (41.91%), Postives = 141/241 (58.51%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSL-KPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSG------KVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVD-HEAHGVDASETLRR 966 +IPAR ASSR GKPL +I GKPM+ R E+++ A + VATD ++ + + G D +MT E +GT+R E + L K DIVVN+QGDEPLIEP++I V +AL P A +TA L + F+PN VK V D H +A+YFSR IP+ + + P L H+G+ +Y FL+ Y L P+PL+ E LEQL+ L +G++++V+ V A GVD E L R Sbjct: 7 VIPARHASSRLPGKPLADIAGKPMVVRVLEQARRAGAAS-VWVATDHPEVLDAVRAAGGDALMTREDHPSGTDRLAEVVDALGWKADDIVVNVQGDEPLIEPKLIAAVAQALADDPVAAIATAAHPLHAAAELFNPNVVKVVCDAHDHALYFSRAPIPWARDAFATARDDIPAGLPVLRHVGLYAYRVAFLRCYASLAPSPLEQWEALEQLRALWHGHRIRVMTVAVAPAAGVDTPEDLER 246
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_VARPS (3-deoxy-manno-octulosonate cytidylyltransferase OS=Variovorax paradoxus (strain S110) GN=kdsB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.728e-39 Identity = 98/243 (40.33%), Postives = 140/243 (57.61%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKK-YDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAF-DPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLL-------HLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEA--HGVDASETLRR 966 ++PAR AS+R KPL +I G PM+ R R+ + +VVA DD I E C + G + I+T + +G++R EA ++L DI+VN+QGDEPLI+P +ID V AL A P+A STA + D F +PN VK V+D G A+YFSR IP+ + G N P +L H+GI Y + F++ +P L P P++ E LEQL+ L +G+++ + V H A GVD L R Sbjct: 6 LVPARLASTRLPNKPLADIAGLPMVVRVARRASQSGAA-RVVVAGDDAAIVEACARHGVEAILTRQDHPSGSDRLAEACEQLGLDGSDIIVNVQGDEPLIDPALIDAVASALAAHPEAAMSTAAHEIDSLDDFLNPNVVKAVLDAQGNALYFSRAPIPWWRDGSANGAPPSVLPAPAPLRHIGIYGYRAGFVRSFPSLAPAPVEATEALEQLRALWHGHRI-AVHVSHVAPGPGVDTPADLER 246
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_LEPBP (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=kdsB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.728e-39 Identity = 101/235 (42.98%), Postives = 135/235 (57.45%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETL 960 +++G+IPARFAS+RF GKPL I KPMIQ T+ + L+ + LVVATDD++I + FG + ++TS GT+R E + Y I+VNIQGDEP +E +IDGVV + +T AV ED DPN+VK V DN G A YFSR IP + G+ Y HLGI +Y+ +FL Y L P+ + E LEQL+ L+NG + V D GVD+ L Sbjct: 4 QILGVIPARFASTRFPGKPLALIGTKPMIQWTYHHASLSKSFHRLVVATDDKRIHDVVLGFGGESVLTSPDHPTGTDRIIEVAETY-PNYGIIVNIQGDEPGMEASLIDGVVGLKTKHRNWEMTTAAVPFTSAEDPKDPNKVKVVFDNKGRANYFSRSPIPASFKGEAK----YHRHLGIYAYERDFLMNYNQLPPSDWETVESLEQLRALQNGSTIGVYLSDKANLGVDSPADL 233
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_LEPBA (3-deoxy-manno-octulosonate cytidylyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=kdsB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.728e-39 Identity = 101/235 (42.98%), Postives = 135/235 (57.45%), Query Frame = 1 Query: 259 RVVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETL 960 +++G+IPARFAS+RF GKPL I KPMIQ T+ + L+ + LVVATDD++I + FG + ++TS GT+R E + Y I+VNIQGDEP +E +IDGVV + +T AV ED DPN+VK V DN G A YFSR IP + G+ Y HLGI +Y+ +FL Y L P+ + E LEQL+ L+NG + V D GVD+ L Sbjct: 4 QILGVIPARFASTRFPGKPLALIGTKPMIQWTYHHASLSKSFHRLVVATDDKRIHDVVLGFGGESVLTSPDHPTGTDRIIEVAETY-PNYGIIVNIQGDEPGMEASLIDGVVGLKTKHRNWEMTTAAVPFTSAEDPKDPNKVKVVFDNKGRANYFSRSPIPASFKGEAK----YHRHLGIYAYERDFLMNYNQLPPSDWETVESLEQLRALQNGSTIGVYLSDKANLGVDSPADL 233
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_IDILO (3-deoxy-manno-octulosonate cytidylyltransferase OS=Idiomarina loihiensis GN=kdsB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.728e-39 Identity = 101/241 (41.91%), Postives = 143/241 (59.34%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLE-KKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFST-AVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFP------YLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIK-VDHEAHGVDASETLRR 966 +IPAR+ SSR GKPL +I GKPMIQ ER++ A+ ++VATDD +I E +FG V+MTS +GTER E +++L + ++VVN+QGDEP I PEII V L A +T AV ED F+PN VK V D GYA+YFSR IP+++ + Y H+GI +Y + F++ Y P+P++ E LEQL+VL +G ++ V + + A G+D E L+R Sbjct: 6 VIPARYGSSRLPGKPLADIAGKPMIQHVVERAE-ASGAAEVIVATDDMRIKEGVDKFGGRVMMTSSEHSSGTERLAEVIEQLALAENEVVVNVQGDEPFIPPEIIRQVADNLANQRQAPMATLAVPITDAEDIFNPNTVKVVTDAAGYALYFSRAAIPWDREHFSADRATNVVTEHYHRHIGIYAYRAGFVRRYIEWEPSPIEQLESLEQLRVLWHGERIHVAEAILAPATGIDTEEDLQR 245
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB_ANASK (3-deoxy-manno-octulosonate cytidylyltransferase OS=Anaeromyxobacter sp. (strain K) GN=kdsB PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.728e-39 Identity = 94/235 (40.00%), Postives = 138/235 (58.72%), Query Frame = 1 Query: 262 VVGIIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYDIVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVNPQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKVIKVDHEAHGVDASETLRR 966 V IIPAR+ +SRF GKPL ++ GKP+I ER+K A +D + VATDD++IA + G + I+T + GT+R EA +KL + +IVVN+QGDEPLIEPE I+ V+ A++ +T L + VK V G A+YFSR IP+ ++G +P H+GI ++ + FL+ + L P L+ EE LEQL+ LE+GY ++V + G+D + L R Sbjct: 4 VAVIIPARYGASRFPGKPLADLAGKPLIAHVVERAKRARGVDVVAVATDDDRIARAVRDAGGEAILTGPAA-TGTDRVAEAARKLAPRPEIVVNLQGDEPLIEPEAIEAVIGAMEGG--VRMATLARPLAAGELERTQVVKVVTRASGDALYFSRAPIPHRRAGGESPL--ARAHVGIYAFTAAFLETFTALAPGRLEGEEALEQLRALEHGYDIRVADTGYRGFGIDTPDDLER 233
BLAST of DY262919 vs. ExPASy Swiss-Prot
Match: KDSB1_ACTP2 (3-deoxy-manno-octulosonate cytidylyltransferase 1 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=kdsB1 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 3.728e-39 Identity = 97/240 (40.42%), Postives = 138/240 (57.50%), Query Frame = 1 Query: 271 IIPARFASSRFEGKPLVNILGKPMIQRTWERSKLATTLDHLVVATDDEKIAECCQQFGADVIMTSESCRNGTERCNEALQKLEKKYD-IVVNIQGDEPLIEPEIIDGVVKALQAAPDAVFSTAVTSLKPEDAFDPNRVKCVVDNHGYAIYFSRGLIPYNKSGKVN------PQFPYLLHLGIQSYDSNFLKIYPGLHPTPLQLEEDLEQLKVLENGYKMKV-IKVDHEAHGVDASETLRR 966 IIPAR+ASSR KPL++I GKPMIQ WE+++ A +++ATD +I + FGA+V MTS+ +GTER E ++K++ D I+VN+QGDEPLI P I+ V + L + + AV E+ F+PN VK + D +G A+YFSR IP+ + + YL H+GI +Y + F+K Y PT L+ E LEQL+ L G K+ + + GVD E L R Sbjct: 6 IIPARYASSRLPRKPLLDIAGKPMIQHVWEKAQQAGAT-RVIIATDHPEIEATAKAFGAEVCMTSDQHNSGTERLAEVIEKMQIADDEIIVNVQGDEPLIPPVIVSQVAENLDRCQVNMATLAVKLTTKEELFNPNAVKALADKNGMALYFSRAPIPFARDHFADCDDAFVASQNYLRHIGIYAYRAGFVKQYVAWQPTQLEQLESLEQLRALWYGEKIHIELAKQAPQVGVDTQEDLER 244 The following BLAST results are available for this feature:
BLAST of DY262919 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 397
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262919 ID=DY262919; Name=DY262919; organism=Citrus clementina; type=EST; length=1297bpback to top |