DY262931

Overview
NameDY262931
Unique NameDY262931
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1189
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: ANGE2_HUMAN (Protein angel homolog 2 OS=Homo sapiens GN=ANGEL2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.364e-17
Identity = 50/128 (39.06%), Postives = 72/128 (56.25%), Query Frame = 2
Query:  377 FVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQ---DLEVELKFRGYTGIWKMRTGNAIDGCAIFWRASRFKLLYEEGIEFNKLGL----RDNVAQICVLE 739
            F V+SYNIL+  L L   S LY H  R +L W +R  +IL E+  + AD++C QEV       ++   L+  GY   +KMRTG   DGCAI ++ S+F LL    +EF +  +    RDNV  + +L+
Sbjct:  167 FSVMSYNILSQDL-LEDNSHLYRHCRRPVLHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAICFKHSKFSLLSVNPVEFFRPDISLLDRDNVGLVLLLQ 293          

HSP 2 Score: 31.187 bits (69), Expect = 7.364e-17
Identity = 27/86 (31.40%), Postives = 39/86 (45.35%), Query Frame = 3
Query:  807 VAICNIHVLFNPKRGEIKLG--PG*DASGKSPCCFKDLK*CSSCSVWGF*LHTKSPLYTFI*SKSRFVWRGRDKGSGKASGENSGT 1058
            + + N H+L+NP+RG+IKL       A   S    KD   C       F     SPLY+FI  + +  + G     GK SG+   +
Sbjct:  304 ICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVMCGDFNSVPGSPLYSFI-KEGKLNYEGLP--IGKVSGQEQSS 386          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CNO6L_MOUSE (CCR4-NOT transcription complex subunit 6-like OS=Mus musculus GN=Cnot6l PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 4.876e-15
Identity = 55/181 (30.39%), Postives = 87/181 (48.07%), Query Frame = 2
Query:  296 PRPRPPKPLDYRNWEHSKASLPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLEV---ELKFRGYTGIWKMRT---------GNAIDGCAIFWRASRFKLLYEEGIEFNKLGL---------------RDNVAQICVLELLSQNF 757
            P   PP+P  +   +     LP  S  F V+ YN+L D  A     +LY + P   L+WE+RK+ I+ E+  W ADI+  QEV+  Q   +    LK RGY G +  ++            +DGCAIF++  +F L+ +  +EFN++ +               +DN+    VLE+  + F
Sbjct:  166 PEQLPPRP--WITLKERDQILP--SASFTVMCYNVLCDKYATR---QLYGYCPSWALNWEYRKKGIMEEIVNWDADIISLQEVETEQYFTLFLPALKDRGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELF 339          

HSP 2 Score: 25.409 bits (54), Expect = 4.876e-15
Identity = 13/37 (35.14%), Postives = 20/37 (54.05%), Query Frame = 1
Query:  862 LGQVRTLLEKAHA----VSKT*NDAPVVLCGDFNCTP 960
            + +V+ +LEKA +     +   N  P+VLC D N  P
Sbjct:  379 VSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLP 415          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4_CRYNE (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Cryptococcus neoformans GN=CCR4 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.170e-14
Identity = 61/181 (33.70%), Postives = 84/181 (46.41%), Query Frame = 2
Query:  293 RPRPRPPKPLDYRNWEHSKASLP-PYS---ERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLEV---ELKFRGYTGIWKMRT---------GNAIDGCAIFWRASRFKLLYEEGIEFNKLGL----------------RDNVAQICVLE 739
            R    PP P   R W   +  +  P S   E F VL+YNIL    A    +  Y + P   LDW++RKR +L E+   SAD++C QE+D  Q  +     LK  GY G    R+            +DGCA FW+  +F+L+  + IEFN+L L                RDN+A +  LE
Sbjct:  357 RDHAPPPPPPPERQWIDLETDVDTPTSGKQESFSVLTYNILCASFA---PATTYSYTPSWALDWDYRKRLLLEEIVTASADVVCLQEIDCKQYADYFYPMLKKEGYEGQHYPRSRAKTMSVDEQKLVDGCATFWKEEKFRLVETQVIEFNQLALQKTDMRTEDMFNRVMSRDNIAVVAALE 534          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4B_ARATH (Carbon catabolite repressor protein 4 homolog 2 OS=Arabidopsis thaliana GN=CCR4-2 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 6.313e-14
Identity = 54/151 (35.76%), Postives = 78/151 (51.66%), Query Frame = 2
Query:  377 FVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEV--DRFQDL-EVELKFRGYTGIWKMRTG-------NAIDGCAIFWRASRFKLLYEEGIEFNKLG--------------------LRDNVAQICVLE 739
            F VLSYNIL+D    S  S LY + P   L W +R++++L E+  + AD++C QEV  D F ++   EL   GY  ++K +T        +AIDGCA F+R  RF  + +  +EFNK                      ++DN+A I VLE
Sbjct:  251 FTVLSYNILSD---TSASSDLYSYCPPWALSWPYRRQNLLREIVGYRADVVCLQEVQSDHFHEIFAPELDKHGYQALYKRKTNEVLSGSTSAIDGCATFFRRDRFSHVKKYDVEFNKAAQSLTDALIPQAQKRTALNRLVKDNIALIVVLE 398          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CNO6L_HUMAN (CCR4-NOT transcription complex subunit 6-like OS=Homo sapiens GN=CNOT6L PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.464e-13
Identity = 54/181 (29.83%), Postives = 86/181 (47.51%), Query Frame = 2
Query:  296 PRPRPPKPLDYRNWEHSKASLPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLEV---ELKFRGYTGIWKMRT---------GNAIDGCAIFWRASRFKLLYEEGIEFNKLGL---------------RDNVAQICVLELLSQNF 757
            P   PP+P  +   +     LP  S  F V+ YN+L D  A     +LY + P   L+WE+RK+ I+ E+    ADI+  QEV+  Q   +    LK RGY G +  ++            +DGCAIF++  +F L+ +  +EFN++ +               +DN+    VLE+  + F
Sbjct:  166 PEQLPPRP--WITLKERDQILP--SASFTVMCYNVLCDKYATR---QLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQYFTLFLPALKERGYDGFFSPKSRAKIMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQVAMANSDGSEAMLNRVMTKDNIGVAVVLEVHKELF 339          

HSP 2 Score: 25.409 bits (54), Expect = 1.464e-13
Identity = 13/37 (35.14%), Postives = 20/37 (54.05%), Query Frame = 1
Query:  862 LGQVRTLLEKAHA----VSKT*NDAPVVLCGDFNCTP 960
            + +V+ +LEKA +     +   N  P+VLC D N  P
Sbjct:  379 VSEVKNILEKASSRPGSPTADPNSIPLVLCADLNSLP 415          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: ANGEL_DROME (Protein angel OS=Drosophila melanogaster GN=angel PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.483e-13
Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 2
Query:  359 PPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLEVEL-KFRGYTG-----IWKMRTGNAIDGCAIFWRASRFKLLYEEGIEFNKLGL----RDNVA 721
            P     F V+SYNILA  L L H   LY  IP   L W+ R++++L EL     DI+C QE+ +F  L V + + R   G     ++K +TG   DGCAI + +S+F+LL  + +E     +    RDNVA
Sbjct:   62 PHKCSSFKVVSYNILAQDLLLEHLF-LYVGIPHEFLSWQRRQQNLLRELLKLDPDILCLQEM-QFDHLPVLVQRLRMGNGKKLAYVYKKKTGCRTDGCAIVYDSSKFELLDHQAVELYDQAVALLNRDNVA 190          

HSP 2 Score: 28.4906 bits (62), Expect = 1.483e-13
Identity = 18/53 (33.96%), Postives = 23/53 (43.40%), Query Frame = 1
Query:  802 KKLPYATFMCFSIPKEEKSSLGQVRTLLEKAHAVSKT*NDAPVVLCGDFNCTP 960
            K+   AT       K       QV  +LE+  + S    D P+VL GDFN  P
Sbjct:  205 KEFVVATTHLLFNTKRSDVRCAQVERILEELQSFS---TDTPIVLTGDFNSLP 254          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CNOT6_HUMAN (CCR4-NOT transcription complex subunit 6 OS=Homo sapiens GN=CNOT6 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.902e-13
Identity = 51/167 (30.54%), Postives = 83/167 (49.70%), Query Frame = 2
Query:  377 FVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLE---VELKFRGYTGIWKMRT---------GNAIDGCAIFWRASRFKLLYEEGIEFNKLGL---------------RDNVAQICVLELLSQNFTENSAALPTSSAH 796
            F V+ YN+L D  A     +LY + P   L+W++RK++I+ E+   +ADI+  QEV+  Q      VELK RGY G +  ++            +DGCAIF++  +F L+ +  +EFN+L +               +DN+    +LEL      + S  +P+   H
Sbjct:  189 FSVMCYNVLCDKYATR---QLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLEL-----RKESIEMPSGKPH 347          

HSP 2 Score: 23.483 bits (49), Expect = 1.902e-13
Identity = 18/67 (26.87%), Postives = 29/67 (43.28%), Query Frame = 1
Query:  862 LGQVRTLLEKAHAVSKT*-----NDAPVVLCGDFNCTPR---VHYTLLSKAKVDLSGGEEIRDQEKL 1038
            L +V+ +++KA    K+         P+VLC D N  P    V Y      + +    +E+R  E L
Sbjct:  380 LSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSGVVEYLSTGGVETNHKDFKELRYNESL 446          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: PDE12_RAT (2',5'-phosphodiesterase 12 OS=Rattus norvegicus GN=Pde12 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 4.752e-13
Identity = 48/140 (34.29%), Postives = 77/140 (55.00%), Query Frame = 2
Query:  386 LSYNILADYLALSH--RSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDR--FQD-LEVELKFRGYTGIWKMRTGNAIDGCAIFWRASRFKLLYEEGIEFNKLGLRDNVAQICVLELLSQNFTENSAALPTSS 790
            +SYNILAD  A +   R+ LY +   + L+ ++R+  I  EL  ++AD++C QEVDR  F D L   L+  G  G+++++     +G A F+R S+F+LL +  I F +  L+ +     +LE L+ N       L  SS
Sbjct:  297 VSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRAVFSDSLVPALEAFGLEGVFRIKQH---EGLATFYRKSKFRLLSQHDISFQE-ALKSDPLHKELLEKLALNPLAQEKVLQRSS 432          

HSP 2 Score: 28.4906 bits (62), Expect = 4.752e-13
Identity = 16/40 (40.00%), Postives = 19/40 (47.50%), Query Frame = 1
Query:  925 PVVLCGDFNCTPRV---HYTLLSKAKVD----LSGGEEIR 1023
            PV+ CGDFN TP     H+ +      D     S GEE R
Sbjct:  489 PVIFCGDFNSTPSTGMYHFVINGSVPEDHEDWASNGEEER 528          

HSP 3 Score: 27.335 bits (59), Expect = 4.752e-13
Identity = 13/35 (37.14%), Postives = 21/35 (60.00%), Query Frame = 3
Query:  765 ILQLS--QQAQHILKKVAICNIHVLFNPKRGEIKL 863
            +LQ+S  Q      KK+ + N H+ ++PK G I+L
Sbjct:  433 VLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRL 467          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: PDE12_MOUSE (2',5'-phosphodiesterase 12 OS=Mus musculus GN=Pde12 PE=2 SV=2)

HSP 1 Score: 60.077 bits (144), Expect = 4.752e-13
Identity = 48/140 (34.29%), Postives = 77/140 (55.00%), Query Frame = 2
Query:  386 LSYNILADYLALSH--RSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDR--FQD-LEVELKFRGYTGIWKMRTGNAIDGCAIFWRASRFKLLYEEGIEFNKLGLRDNVAQICVLELLSQNFTENSAALPTSS 790
            +SYNILAD  A +   R+ LY +   + L+ ++R+  I  EL  ++AD++C QEVDR  F D L   L+  G  G+++++     +G A F+R S+F+LL +  I F +  L+ +     +LE L+ N       L  SS
Sbjct:  297 VSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRAVFSDSLVPALEAFGLEGVFRIKQH---EGLATFYRKSKFRLLSQHDISFQE-ALKSDPLHKELLEKLALNPLAQEKVLQRSS 432          

HSP 2 Score: 28.4906 bits (62), Expect = 4.752e-13
Identity = 16/40 (40.00%), Postives = 19/40 (47.50%), Query Frame = 1
Query:  925 PVVLCGDFNCTPRV---HYTLLSKAKVD----LSGGEEIR 1023
            PV+ CGDFN TP     H+ +      D     S GEE R
Sbjct:  489 PVIFCGDFNSTPSTGMYHFVISGSIAEDHEDWASNGEEER 528          

HSP 3 Score: 27.335 bits (59), Expect = 4.752e-13
Identity = 13/35 (37.14%), Postives = 21/35 (60.00%), Query Frame = 3
Query:  765 ILQLS--QQAQHILKKVAICNIHVLFNPKRGEIKL 863
            +LQ+S  Q      KK+ + N H+ ++PK G I+L
Sbjct:  433 VLQISVLQSTTDSSKKICVANTHLYWHPKGGYIRL 467          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4_USTMA (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Ustilago maydis GN=CCR4 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.116e-13
Identity = 60/189 (31.75%), Postives = 94/189 (49.74%), Query Frame = 2
Query:  290 SRPRPRPPKPLDYRNWEHSKASLPPYS----------ERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQE--VDRFQDLEV-ELKFRGYTGIW----KMRT-----GNAIDGCAIFWRASRFKLLYEEGIEFNKLGL-----------------RDNVAQICVLE 739
            S P P PP     R W      LP             E F VLSYNIL D  A +   ++Y + P   L W++RK  IL E+  +SADI C QE  V++++D  +  L  + Y G++    + RT        +DGCAIF+++++++L+ ++ +EFN++ L                 +DN+A I +LE
Sbjct:  268 SCPVPLPPPE---REWIMIDPDLPDLDADKHANDATQESFNVLSYNILFDRYATA---QMYGYTPSWALAWDYRKEFILQEVMSYSADICCLQEVGVEQYEDYFLHHLSQQDYEGVFYPKSRARTMRDDERRRVDGCAIFYKSNKYQLIEKQLVEFNQIALQRPDFKKSEDMYNRVMTKDNIAVIALLE 450          
The following BLAST results are available for this feature:
BLAST of DY262931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
ANGE2_HUMAN7.364e-1739.06Protein angel homolog 2 OS=Homo sapiens GN=ANGEL2 ... [more]
CNO6L_MOUSE4.876e-1530.39CCR4-NOT transcription complex subunit 6-like OS=M... [more]
CCR4_CRYNE2.170e-1433.70Glucose-repressible alcohol dehydrogenase transcri... [more]
CCR4B_ARATH6.313e-1435.76Carbon catabolite repressor protein 4 homolog 2 OS... [more]
CNO6L_HUMAN1.464e-1329.83CCR4-NOT transcription complex subunit 6-like OS=H... [more]
ANGEL_DROME1.483e-1338.17Protein angel OS=Drosophila melanogaster GN=angel ... [more]
CNOT6_HUMAN1.902e-1330.54CCR4-NOT transcription complex subunit 6 OS=Homo s... [more]
PDE12_RAT4.752e-1334.292',5'-phosphodiesterase 12 OS=Rattus norvegicus GN... [more]
PDE12_MOUSE4.752e-1334.292',5'-phosphodiesterase 12 OS=Mus musculus GN=Pde1... [more]
CCR4_USTMA9.116e-1331.75Glucose-repressible alcohol dehydrogenase transcri... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BD12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262931 ID=DY262931; Name=DY262931; organism=Citrus clementina; type=EST; length=1189bp
CAGAGGTGGTAGAAGCCACAGGAGAGGCTTCTCCGACAGACCTTTTAACG
GCGCAAACGGCCGTTTCGTTAGCGGAGACTCGCATATTAGCTCAGTAAGT
AACTCCAACCGCGGCGTCCGTCAAGGAAACTACACGGCGGTTCCGCCTGC
ACCGTTTTATCAAAACCAGCCGTTTCGGCAACCTCCGCCTTACAATCAGA
ACCAGCAGTTTAGGCCGCCTCCGTTATATAATCGAAATCCACAGTTTAGG
CGACCTCGTCCTCCGTTTGATCAAAATCAAGCGGTCCAGTCGCGGCCACG
ACCGCGGCCTCCGAAGCCGTTGGACTATCGGAATTGGGAGCATTCAAAGG
CATCTCTGCCTCCTTACTCTGAGCGATTTGTAGTTCTCTCCTATAACATA
CTAGCTGATTACCTTGCTCTTAGTCACCGGAGCAAACTTTACTTTCATAT
ACCTAGACATTTGTTGGACTGGGAATGGAGGAAGAGAAGTATATTGTTTG
AGCTTGGACTCTGGTCAGCTGACATAATGTGTTTTCAGGAGGTTGATAGA
TTTCAAGATCTAGAGGTGGAGTTGAAGTTTCGGGGATACACTGGCATCTG
GAAGATGCGAACTGGCAATGCAATTGATGGATGTGCAATCTTTTGGCGTG
CTTCAAGATTCAAGTTGCTTTATGAGGAAGGCATAGAGTTCAATAAGCTT
GGACTTCGGGATAATGTTGCTCAGATATGCGTGCTTGAGTTATTGAGTCA
AAATTTCACTGAAAATTCTGCAGCTCTCCCAACAAGCTCAGCACATTCTA
AAAAAAGTTGCCATATGCAACATTCATGTGCTTTTCAATCCCAAAAGAGG
AGAAATCAAGCTTGGGCCAGGTTAGGACGCTTCTGGAAAAAGCCCATGCT
GTTTCAAAGACTTGAAATGATGCTCCAGTTGTTCTGTGTGGGGATTTTAA
CTGCACACCAAGAGTCCACTATACACTTTTATCTAAAGCAAAAGTAGATT
TGTCTGGAGGGGAAGAGATAAGGGATCAGGAAAAGCTTCTGGCGAAAATT
CGGGAACACCTCCCCCCATTTCCAGGGTTCAGTCAAATGGATCAACGCAA
GGGCCCCCCCGAGGGGGGGAATCAGTGGTGGAGGGGTCCCCCCCCCCAAA
CATTTGGGAGGAGGGAAAAAAAAAGGGAAAGGGGGAAAA
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