DY262931
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CNOT6_XENLA (CCR4-NOT transcription complex subunit 6 OS=Xenopus laevis GN=cnot6 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.464e-12 Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 2 Query: 377 FVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLE---VELKFRGYTGIWKMRT---------GNAIDGCAIFWRASRFKLLYEEGIEFNKLGLRDN 715 F V+ YN+L D A +LY + P L+W++RK++I+ E+ +ADI+ QEV+ Q VELK RGY G + ++ +DGCAIF++ +F L+ + +EFN+L + ++ Sbjct: 184 FSVMCYNVLCDKYATR---QLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANS 305
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CNOT6_RAT (CCR4-NOT transcription complex subunit 6 OS=Rattus norvegicus GN=Cnot6 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.464e-12 Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 2 Query: 377 FVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLE---VELKFRGYTGIWKMRT---------GNAIDGCAIFWRASRFKLLYEEGIEFNKLGLRDN 715 F V+ YN+L D A +LY + P L+W++RK++I+ E+ +ADI+ QEV+ Q VELK RGY G + ++ +DGCAIF++ +F L+ + +EFN+L + ++ Sbjct: 189 FSVMCYNVLCDKYATR---QLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANS 310
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CNOT6_MOUSE (CCR4-NOT transcription complex subunit 6 OS=Mus musculus GN=Cnot6 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 3.464e-12 Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 2 Query: 377 FVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLE---VELKFRGYTGIWKMRT---------GNAIDGCAIFWRASRFKLLYEEGIEFNKLGLRDN 715 F V+ YN+L D A +LY + P L+W++RK++I+ E+ +ADI+ QEV+ Q VELK RGY G + ++ +DGCAIF++ +F L+ + +EFN+L + ++ Sbjct: 189 FSVMCYNVLCDKYATR---QLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQEVETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANS 310
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4_NEUCR (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Neurospora crassa GN=ccr-4 PE=3 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 3.464e-12 Identity = 58/181 (32.04%), Postives = 89/181 (49.17%), Query Frame = 2 Query: 284 VQSRPRPRPPKPLDYRNWEHSKASLPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEV--DRFQD-LEVELKFRGYTGI-W---KMRTGN-----AIDGCAIFWRASRFKLLYEEGIE-----------------FNKLGLRDNVAQICVLE 739 ++ P P PP P R + + P ER V+++NIL D A ++ +Y + P L WE+RK IL E+ D++C QE+ D F+D EL Y G+ W K +T N A+DGCAIF++ S++ LL ++ I+ FN++ +DN+ IC E Sbjct: 367 LEQAPVPLPPSP---RKPIVVQEDVSPSLERIKVMTWNILCDKFATTN---MYGYTPTGALSWEYRKERILQEIRDRDVDMLCLQEIATDVFRDFFSPELAQNDYKGVHWPRPKAKTMNEKDAAAVDGCAIFYKGSKWILLDKQLIDYANIAINRPDMKNQHDIFNRVMPKDNIGIICFFE 541
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CN6LA_XENLA (CCR4-NOT transcription complex subunit 6-like-A OS=Xenopus laevis GN=cnot6l-A PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 4.524e-12 Identity = 49/150 (32.67%), Postives = 78/150 (52.00%), Query Frame = 2 Query: 311 PKPLDYRNWEHSKAS---LPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLEV---ELKFRGYTGIWKMRT---------GNAIDGCAIFWRASRFKLLYEEGIEFNKLGLRDN 715 P+ L +R W K LP S F V+ YN+L D A +LY + P L+WE+RK+ I+ E+ ADI+ QEV+ Q + L+ RGY G + ++ +DGCAIF+R +F L+ + +EFN++ + ++ Sbjct: 161 PEQLPHRPWITLKERDQILPSVS--FTVMCYNVLCDKYATR---QLYGYCPSWALNWEYRKKGIMDEIISCDADIISLQEVETEQYFTLFMPALEERGYDGFFSPKSRAKIMSDQEKKHVDGCAIFFRTEKFSLVQKHTVEFNQIAMANS 305
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: PDE12_HUMAN (2',5'-phosphodiesterase 12 OS=Homo sapiens GN=PDE12 PE=1 SV=2) HSP 1 Score: 57.3806 bits (137), Expect = 6.174e-12 Identity = 40/107 (37.38%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 386 LSYNILADYLALSH--RSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDR--FQD-LEVELKFRGYTGIWKMRTGNAIDGCAIFWRASRFKLLYEEGIEF 691 +SYNILAD A + R+ LY + + L+ ++R+ I EL ++AD++C QEVDR F D L L+ G G+++++ +G A F+R S+F LL + I F Sbjct: 298 VSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADVICLQEVDRAVFSDSLVPALEAFGLEGVFRIKQH---EGLATFYRKSKFSLLSQHDISF 401 HSP 2 Score: 28.1054 bits (61), Expect = 6.174e-12 Identity = 16/40 (40.00%), Postives = 19/40 (47.50%), Query Frame = 1 Query: 925 PVVLCGDFNCTPRV---HYTLLSKAKVD----LSGGEEIR 1023 PV+ CGDFN TP H+ + D S GEE R Sbjct: 490 PVIFCGDFNSTPSTGMYHFVINGSIPEDHEDWASNGEEER 529 HSP 3 Score: 26.5646 bits (57), Expect = 6.174e-12 Identity = 12/35 (34.29%), Postives = 22/35 (62.86%), Query Frame = 3 Query: 765 ILQLS--QQAQHILKKVAICNIHVLFNPKRGEIKL 863 +LQ+S Q + K++ + N H+ ++PK G I+L Sbjct: 434 VLQVSVLQSTKDSSKRICVANTHLYWHPKGGYIRL 468
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: PDE12_BOVIN (2',5'-phosphodiesterase 12 OS=Bos taurus GN=PDE12 PE=1 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 6.174e-12 Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 2 Query: 386 LSYNILADYLALSH--RSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDR--FQD-LEVELKFRGYTGIWKMRTGNAIDGCAIFWRASRFKLLYEEGIEFNK 697 +SYNILAD A + R+ LY + + L+ ++R+ I EL ++AD++C QEVDR F D L L+ G G+++++ +G A F+R S+F LL + I F++ Sbjct: 298 VSYNILADTYAQTEFSRTVLYPYCAPYALELDYRQNLIQKELTGYNADLICLQEVDRCVFTDSLMPALEAFGLEGVFRIKQH---EGLATFYRKSKFSLLSQHDIAFHE 403 HSP 2 Score: 28.1054 bits (61), Expect = 6.174e-12 Identity = 16/40 (40.00%), Postives = 19/40 (47.50%), Query Frame = 1 Query: 925 PVVLCGDFNCTPRV---HYTLLSKAKVD----LSGGEEIR 1023 PV+ CGDFN TP H+ + D S GEE R Sbjct: 490 PVIFCGDFNSTPSTGMYHFVINGSIAEDHEDWTSNGEEER 529 HSP 3 Score: 26.9498 bits (58), Expect = 6.174e-12 Identity = 11/37 (29.73%), Postives = 23/37 (62.16%), Query Frame = 3 Query: 753 ISLKILQLSQQAQHILKKVAICNIHVLFNPKRGEIKL 863 + + +LQ ++ + KK+ + N H+ ++PK G I+L Sbjct: 435 VQVSVLQSTKDSS---KKICVANTHLYWHPKGGYIRL 468
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CN6LB_XENLA (CCR4-NOT transcription complex subunit 6-like-B OS=Xenopus laevis GN=cnot6l-B PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.719e-11 Identity = 49/150 (32.67%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 311 PKPLDYRNWEHSKAS---LPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLEV---ELKFRGYTGIWKMRT---------GNAIDGCAIFWRASRFKLLYEEGIEFNKLGLRDN 715 P+ L R W K LP S F V+ +N+L D A +LY + P L+WE+RK+ I+ E+ ADI+ QEV+ Q + LK RGY G + ++ +DGCAIF+R +F L+ + +EFN++ + ++ Sbjct: 161 PEQLPQRPWITLKERDQILP--SVPFTVMCFNVLCDKYATR---QLYGYCPSWALNWEYRKKGIMEEIVSCDADIISLQEVETEQYYTLFMPALKERGYDGFFSPKSRAKIMSDQEKKHVDGCAIFFRTEKFSLVQKHTVEFNQIAMANS 305
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4_NEOFI (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=ccr4 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.719e-11 Identity = 47/153 (30.72%), Postives = 75/153 (49.02%), Query Frame = 2 Query: 287 QSRPRPRPPKPLDYRNWEHSKASLPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLEV---ELKFRGYTGIWKMR---------TGNAIDGCAIFWRASRFKLLYEEGIEFNKLGLR 709 + P PP D+ + + +S +++ VLSYN L D A Y + P +L WE+R+ IL EL +DI+C QE+D+ E +L + Y G++ R +DGCA F++AS+F LL ++ I F + +R Sbjct: 351 EEMPVHLPPPDRDWIVLDETASSSNHRTDKVTVLSYNTLCDSSATQSH---YGYAPARVLSWEFRRELILNELRSHDSDIICLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKASKFILLDKQLINFGQTAVR 500
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4_CANGA (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Candida glabrata GN=CCR4 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.245e-11 Identity = 42/146 (28.77%), Postives = 75/146 (51.37%), Query Frame = 2 Query: 308 PPKPLDYRNWEHSKASLPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDR--FQDL-EVELKFRGYTGIWKMRT---------GNAIDGCAIFWRASRFKLLYEEGIEFNKLGLR 709 P K D S + F +LSYN L + A K+Y + P L W++R+ + ++ ++ DI+C QEV+ F+D + L+ GYTG++ +T +DGC F++ S+FK+L++E ++F+ L ++ Sbjct: 515 PEKEYDTVQEAERNLSSDMQKKSFTMLSYNTLCQHYATP---KMYRYTPSWALSWDYRREKLKEQILNFNTDIICLQEVEAKTFEDFWQPLLEKHGYTGLFHAKTRAKTMQSKDSKKVDGCCAFYKTSKFKMLFKECVDFSGLWMK 657 The following BLAST results are available for this feature:
BLAST of DY262931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262931 ID=DY262931; Name=DY262931; organism=Citrus clementina; type=EST; length=1189bpback to top |