DY262931

Overview
NameDY262931
Unique NameDY262931
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1189
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4_ASPOR (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Aspergillus oryzae GN=ccr4 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.245e-11
Identity = 47/148 (31.76%), Postives = 72/148 (48.65%), Query Frame = 2
Query:  302 PRPPKPLDYRNWEHSKASLPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQ---DLEVELKFRGYTGIWKMR---------TGNAIDGCAIFWRASRFKLLYEEGIEFNKLGLR 709
            P  P P D R+W     +    +E+  VLSYN L D  A       + + P   L WE+R+  IL EL    +DI+C QEVD+         +L + GY G++  R            ++DGCA F++ ++F LL ++ I F +  +R
Sbjct:  354 PENPPPPD-RDWVILDETAGTSTEKITVLSYNALCDSSATQSH---FGYTPSRALSWEFRRDVILSELRSHDSDIVCLQEVDQGSYNGYFREQLAYNGYKGVYWPRGRAMGMQEEEAKSVDGCATFFKGTKFILLDKQMINFGQTAVR 497          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4_SCHPO (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Schizosaccharomyces pombe GN=ccr4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.533e-11
Identity = 43/133 (32.33%), Postives = 75/133 (56.39%), Query Frame = 2
Query:  338 EHSKASLPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLEV----ELKFRGYTGIW----KMRTGN-----AIDGCAIFWRASRFKLLYEEGIEFNK 697
            + +K S    + +F ++SYN+L +  A S    LY + P   L W +RK  I+ ELG ++ADI+C QEVD  ++ +     ++  +GY G+     ++RT N      +DGCA F++ S++ +  +  IE+N+
Sbjct:  323 DSNKPSTTSKNLKFTIMSYNVLCERYATS---TLYGYTPSWALSWSYRKDLIMQELGGYNADIICLQEVD-VENYDTFFAPQMSLKGYKGVHFPKSRVRTMNEVERRIVDGCATFFKTSKYVMHEKMVIEYNQ 451          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4_ASPFU (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Aspergillus fumigatus GN=ccr4 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.533e-11
Identity = 45/146 (30.82%), Postives = 72/146 (49.32%), Query Frame = 2
Query:  308 PPKPLDYRNWEHSKASLPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLEV---ELKFRGYTGIWKMR---------TGNAIDGCAIFWRASRFKLLYEEGIEFNKLGLR 709
            PP   D+   + + +S    +++  VLSYN L D  A       Y + P  +L WE+R+  IL EL    +DI+C QE+D+    E    +L +  Y G++  R             +DGCA F++ S+F LL ++ I F +  +R
Sbjct:  304 PPPDRDWIVLDETASSSNHRTDKVTVLSYNTLCDSSATQSH---YGYAPARVLSWEFRRELILNELRSHDSDIICLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKGSKFILLDKQLINFGQTAVR 446          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4_ASPCL (Glucose-repressible alcohol dehydrogenase transcriptional effector OS=Aspergillus clavatus GN=ccr4 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.533e-11
Identity = 44/139 (31.65%), Postives = 68/139 (48.92%), Query Frame = 2
Query:  329 RNWEHSKASLPPYSERFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDLEV---ELKFRGYTGIWKMR---------TGNAIDGCAIFWRASRFKLLYEEGIEFNKLGLR 709
            R+W     +    +E+  VLSYN L D  A       Y + P  +L WE+R+  IL EL    +DI+C QE+D+    E    +L +  Y G++  R             +DGCA F++ S+F LL ++ I F +  +R
Sbjct:  282 RDWVVLDETASASTEKITVLSYNTLCDSSATQSH---YGYAPARVLSWEFRRELILSELRSHGSDIVCLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKGVDGCATFFKGSKFILLDKQLINFGQTAVR 417          
BLAST of DY262931 vs. ExPASy Swiss-Prot
Match: CCR4D_ARATH (Carbon catabolite repressor protein 4 homolog 4 OS=Arabidopsis thaliana GN=CCR4-4 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 6.533e-11
Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = 2
Query:  374 RFVVLSYNILADYLALSHRSKLYFHIPRHLLDWEWRKRSILFELGLWSADIMCFQEVDRFQDL-EVELKFRGYTGIWKMRTG-NAIDGCAIFWRASRFKLLYEEGIEFNKL 700
            RF ++SYNILA       +S L  H P   L W+ R  +IL  L    AD  C QEVD +       +   GY+GI+  RTG    DGCAIF++ S  +L+ +E IE+N L
Sbjct:   91 RFRLVSYNILAQVYV---KSALLPHSPPACLKWKARSHAILSVLKNLQADFFCLQEVDEYDSFYRNNMDSLGYSGIYIQRTGQRKRDGCAIFYKPSCAELVTKERIEYNDL 198          
The following BLAST results are available for this feature:
BLAST of DY262931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
CCR4_ASPOR2.245e-1131.76Glucose-repressible alcohol dehydrogenase transcri... [more]
CCR4_SCHPO6.533e-1132.33Glucose-repressible alcohol dehydrogenase transcri... [more]
CCR4_ASPFU6.533e-1130.82Glucose-repressible alcohol dehydrogenase transcri... [more]
CCR4_ASPCL6.533e-1131.65Glucose-repressible alcohol dehydrogenase transcri... [more]
CCR4D_ARATH6.533e-1140.54Carbon catabolite repressor protein 4 homolog 4 OS... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BD12RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262931 ID=DY262931; Name=DY262931; organism=Citrus clementina; type=EST; length=1189bp
CAGAGGTGGTAGAAGCCACAGGAGAGGCTTCTCCGACAGACCTTTTAACG
GCGCAAACGGCCGTTTCGTTAGCGGAGACTCGCATATTAGCTCAGTAAGT
AACTCCAACCGCGGCGTCCGTCAAGGAAACTACACGGCGGTTCCGCCTGC
ACCGTTTTATCAAAACCAGCCGTTTCGGCAACCTCCGCCTTACAATCAGA
ACCAGCAGTTTAGGCCGCCTCCGTTATATAATCGAAATCCACAGTTTAGG
CGACCTCGTCCTCCGTTTGATCAAAATCAAGCGGTCCAGTCGCGGCCACG
ACCGCGGCCTCCGAAGCCGTTGGACTATCGGAATTGGGAGCATTCAAAGG
CATCTCTGCCTCCTTACTCTGAGCGATTTGTAGTTCTCTCCTATAACATA
CTAGCTGATTACCTTGCTCTTAGTCACCGGAGCAAACTTTACTTTCATAT
ACCTAGACATTTGTTGGACTGGGAATGGAGGAAGAGAAGTATATTGTTTG
AGCTTGGACTCTGGTCAGCTGACATAATGTGTTTTCAGGAGGTTGATAGA
TTTCAAGATCTAGAGGTGGAGTTGAAGTTTCGGGGATACACTGGCATCTG
GAAGATGCGAACTGGCAATGCAATTGATGGATGTGCAATCTTTTGGCGTG
CTTCAAGATTCAAGTTGCTTTATGAGGAAGGCATAGAGTTCAATAAGCTT
GGACTTCGGGATAATGTTGCTCAGATATGCGTGCTTGAGTTATTGAGTCA
AAATTTCACTGAAAATTCTGCAGCTCTCCCAACAAGCTCAGCACATTCTA
AAAAAAGTTGCCATATGCAACATTCATGTGCTTTTCAATCCCAAAAGAGG
AGAAATCAAGCTTGGGCCAGGTTAGGACGCTTCTGGAAAAAGCCCATGCT
GTTTCAAAGACTTGAAATGATGCTCCAGTTGTTCTGTGTGGGGATTTTAA
CTGCACACCAAGAGTCCACTATACACTTTTATCTAAAGCAAAAGTAGATT
TGTCTGGAGGGGAAGAGATAAGGGATCAGGAAAAGCTTCTGGCGAAAATT
CGGGAACACCTCCCCCCATTTCCAGGGTTCAGTCAAATGGATCAACGCAA
GGGCCCCCCCGAGGGGGGGAATCAGTGGTGGAGGGGTCCCCCCCCCCAAA
CATTTGGGAGGAGGGAAAAAAAAAGGGAAAGGGGGAAAA
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