DY262933

Overview
NameDY262933
Unique NameDY262933
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1350
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: PRP2_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 OS=Saccharomyces cerevisiae GN=PRP2 PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.220e-56
Identity = 135/354 (38.14%), Postives = 189/354 (53.39%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHIT-SPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMG---EQL-GCLDEVLTIVSML-SVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRAR 1044
            PIF++PGR +PV+  Y+  P  +Y+ AA+     IH T S PGDIL+F+TGQ+EIE      K ++E+++S       +++I PIY+ LP + Q KIF+   E  RK ++ATNIAETSLT+DGI YVID G+ K   Y P  GM  L   P S                  C+R++T+ +YL+E+   P PEI RTNL N V             F  MD P    +  S+  L++LGALN+ G +T LG  M EFP +P  AK+L      EQ  G L+E LTIVSML   PS+F       ++ DAA    S       L    ++  +++     WC++  +  K+  R R
Sbjct:  394 PIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERT----KTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLLLLSLGVTDLIKFPLMDKPSIPTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFI-----GQKRDAAASVLSEVESDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVR 738          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: PRH1_SCHPO (Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces pombe GN=prh1 PE=2 SV=2)

HSP 1 Score: 220.705 bits (561), Expect = 1.594e-56
Identity = 126/350 (36.00%), Postives = 199/350 (56.86%), Query Frame = 1
Query:    4 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENF--SYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRARK 1047
            I +I GR +PV   Y+ TP  DY++A ++    +H   PPGDIL+F+TGQDEIEA    +K   +QL S+    +P++   P+++ LP + Q ++F  A    RK +++TNIAETS+T+ GI YVIDTG  K+K +N K+G+++L V P+S                  CYR+YTE+ + +++    +PEI+R +L   V             F +MDPP +E +L ++  L+ +GAL++ G + DLG++M   PL P LA+ +L   +  CL EV+ +VS LS  S+F  P+++ +E+  AR  F  S  +L T L  +   +  S      WC + +++    RRA K
Sbjct:  265 ICYISGRQYPVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQLPSN----LPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF-DKLPKETIPEIKRIDLSQAVLTLKARGQNDVINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQEKRDEAIEARLKFLHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFIN----RRALK 605          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX40_RAT (Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus GN=Dhx40 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.396e-52
Identity = 130/359 (36.21%), Postives = 192/359 (53.48%), Query Frame = 1
Query:    1 PIFHIPGRTFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA-------ARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLH 1020
            PIF IPGR +PV      L      E+  Y++A VK  M IH+    GDIL+F+TGQ EIE +C  L +  E +     +  TT +   LLILP Y  +  D Q +IF     G RKC+++TNI+ TSLT+DGI YV+D G+ K   +NP++G+D L+V P+S                  C+R+Y++  + N+ +P  V PEI+RT+L +VV             F ++DPP +  IL ++ QL+   A++  G +T LG  MVEFPL P L   ++    L C D +L I +MLSV +VF RP D   + +A       A +   + +  T L  +F    KS+     WC++ ++H
Sbjct:  226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKD-FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFAT-LAVIFEQC-KSSGAPASWCQKHWIH 579          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX40_PONAB (Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.396e-52
Identity = 130/359 (36.21%), Postives = 192/359 (53.48%), Query Frame = 1
Query:    1 PIFHIPGRTFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA-------ARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLH 1020
            PIF IPGR +PV      L      E+  Y++A VK  M IH+    GDIL+F+TGQ EIE +C  L +  E +     +  TT +   LLILP Y  +  D Q +IF     G RKC+++TNI+ TSLT+DGI YV+D G+ K   +NP++G+D L+V P+S                  C+R+Y++  + N+ +P  V PEI+RT+L +VV             F ++DPP +  IL ++ QL+   A++  G +T LG  MVEFPL P L   ++    L C D +L I +MLSV +VF RP D   + +A       A +   + +  T L  +F    KS+     WC++ ++H
Sbjct:  226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKD-FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT-LAVIFEQC-KSSGAPASWCQKHWIH 579          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX40_MOUSE (Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.396e-52
Identity = 128/358 (35.75%), Postives = 189/358 (52.79%), Query Frame = 1
Query:    1 PIFHIPGRTFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA-------ARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLH 1020
            PIF IPGR +PV      L      E+  Y++A VK  M IH+    GDIL+F+TGQ EIE +C  L +  E +     +  TT +   LLILP Y  +  D Q +IF     G RKC+++TNI+ TSLT+DGI YV+D G+ K   +NP++G+D L+V P+S                  C+R+Y++  +   M    +PEI+RT+L +VV             F ++DPP +  IL ++ QL+   A++  G +T LG  MVEFPL P L   ++    L C D +L I +MLSV +VF RP D   + +A       A +   + +  T L  +F    KS+     WC++ ++H
Sbjct:  226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT-LAVIFEQC-KSSGAPASWCQKHWIH 579          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX40_HUMAN (Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 1.396e-52
Identity = 130/359 (36.21%), Postives = 192/359 (53.48%), Query Frame = 1
Query:    1 PIFHIPGRTFPVN----TLYSKTPCED--YVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQL-----ISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPV-PEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA-------ARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLH 1020
            PIF IPGR +PV      L      E+  Y++A VK  M IH+    GDIL+F+TGQ EIE +C  L +  E +     +  TT +   LLILP Y  +  D Q +IF     G RKC+++TNI+ TSLT+DGI YV+D G+ K   +NP++G+D L+V P+S                  C+R+Y++  + N+ +P  V PEI+RT+L +VV             F ++DPP +  IL ++ QL+   A++  G +T LG  MVEFPL P L   ++    L C D +L I +MLSV +VF RP D   + +A       A +   + +  T L  +F    KS+     WC++ ++H
Sbjct:  226 PIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLD--GLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKD-FWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFAT-LAVIFEQC-KSSGAPASWCQKHWIH 579          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX35_CAEEL (Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis elegans GN=Y67D2.6 PE=2 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 3.110e-52
Identity = 122/351 (34.76%), Postives = 179/351 (51.00%), Query Frame = 1
Query:    4 IFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYR---NLTT*LCF-MFYSIGKSTSIGGDWCEELYLHVKS*RRA 1041
            I  + GRT PV   ++KT   DY ++AV   + IH    PGDIL+F+TGQDE+E  C  L+E     ++   +    L ++P Y  LPA  Q K F+    GTRK +VATNIAE S+T+ GI YVIDTGY K++  +   G++ L    VS                  CYRLY ES +        VPEIQR  + + +             F ++ PPP   ++N +  L+ LGA++    LT  LG +M EFPL P  +K LL   + GC  E++TIV+M+ +  VF  P  +  ++D  R+ F+     ++T    F  F   G+S      WC + +++ +   RA
Sbjct:  257 IISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEKLRE-----LAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEF-ERFAEGTVPEIQRCQMASTILQLKALGVQNVHRFHYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAVEEGDHMTMLNVFTKFVENGRSKK----WCSDHFVNYRGLMRA 597          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: YK99_SCHPO (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 OS=Schizosaccharomyces pombe GN=SPAC20H4.09 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.710e-42
Identity = 110/347 (31.70%), Postives = 181/347 (52.16%), Query Frame = 1
Query:   13 IPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTD-LGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRN---LTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRA 1041
            I G+ FPV TL+ + P E+YV++A++  + I+ T PPGDIL+F++G+ EIE   + +K+  + LI ++  +   L+ LP+++ L  D Q ++F       RK I +TNIAETS+T+DGI YV+D+G+ K ++YNP      L   P+S                   +RLYTE AY + M      +I   ++  +V             F F   PP  +++ ++  L++LG L+  G LTD LG ++    LD  ++K LL   Q GC  E+L+I S+L+   VF+ P   ++       +  + N   + T L      +G    +   WC + YL+ ++ R+A
Sbjct:  200 IEGKLFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIE---YCIKKIEDSLIHAS-EDCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAY-SLMKEEFEADILNCDMSPLVLFLKGLGLKNILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKNDAFVAHSSFFANEGDIITALNVFESFVGNKKDL--QWCRKNYLNYQTLRQA 539          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: YK16_SCHPO (Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces pombe GN=SPAPB1A10.06c PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.891e-41
Identity = 104/330 (31.52%), Postives = 160/330 (48.48%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERM-----------------------EQLISSTTREVPE-----------------LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 870
            PI  I  R +PV+  +++T   DY++ A  +   IH   P G IL+F+TGQ E+E  C  L++R                         + + S T ++ +                 + +LP+YS L  + Q K+F+ + EG R CIVATN+AETS+T+  I YV+D G  K +VYN K  +   +V  +S                  CYRLY+ + + +      +PEI RT + ++V             F F   P +  +  S+  L  LGA+++ G LT LG +M  FPL P  +KML++G+Q GCL  V+ +VS LS+  +F
Sbjct:  584 PIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILVFLTGQQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTSSSSSVTYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVESIVLQMKNMNIDNIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLF 913          
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHR2_YEAST (Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces cerevisiae GN=DHR2 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.891e-41
Identity = 110/354 (31.07%), Postives = 181/354 (51.13%), Query Frame = 1
Query:    1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRP----KDRAEESDAARENFSYR-----NLTT*LCFMFYSIGKS---TSIGGDWCEELYLHVK 1026
            PI  + GR F V   Y K P +D V+A ++  + I+     GDIL F+ GQ+EI+ A   + E++ + +S     VP ++  P+Y+ LPA  Q+ +F   K   RK + +TNIAETS+T+ G+ +V+D+G  K+KV+  ++G+  L   P+S                   +RLY ES Y+ ++     PEI R+++ + V             + + + P +E I+  + +L+ LGAL+  G +T  G +M   PL P L+ +L+   ++GCL +V+ IVS LSV ++   P    +D   E   +  N   R      L       FY +GKS   +S   DWC+ L + ++
Sbjct:  252 PILFVEGRKFDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAV-TIMEKIAKYVSDEA-PVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYV-KLPKQSEPEIARSDVTSPVLMLKRYGVDDLLNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSLCNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIR 602          
The following BLAST results are available for this feature:
BLAST of DY262933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PRP2_YEAST1.220e-5638.14Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
PRH1_SCHPO1.594e-5636.00Probable ATP-dependent RNA helicase prh1 OS=Schizo... [more]
DHX40_RAT1.396e-5236.21Probable ATP-dependent RNA helicase DHX40 OS=Rattu... [more]
DHX40_PONAB1.396e-5236.21Probable ATP-dependent RNA helicase DHX40 OS=Pongo... [more]
DHX40_MOUSE1.396e-5235.75Probable ATP-dependent RNA helicase DHX40 OS=Mus m... [more]
DHX40_HUMAN1.396e-5236.21Probable ATP-dependent RNA helicase DHX40 OS=Homo ... [more]
DHX35_CAEEL3.110e-5234.76Probable ATP-dependent RNA helicase DHX35 homolog ... [more]
YK99_SCHPO1.710e-4231.70Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
YK16_SCHPO1.891e-4131.52Putative ATP-dependent RNA helicase PB1A10.06c OS=... [more]
DHR2_YEAST1.891e-4131.07Probable ATP-dependent RNA helicase DHR2 OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BE02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262933 ID=DY262933; Name=DY262933; organism=Citrus clementina; type=EST; length=1350bp
CCAATATTCCACATTCCTGGACGAACCTTTCCTGTGAATACTTTGTACAG
TAAAACCCCATGTGAGGACTATGTTGAAGCTGCAGTAAAGCAGGCTATGA
CTATCCACATCACCAGCCCTCCAGGCGACATCCTAATCTTCATGACTGGC
CAAGATGAGATTGAGGCAGCATGTTTTGCCCTTAAGGAGCGCATGGAACA
GCTCATCTCCTCCACCACGAGAGAGGTTCCTGAACTCTTAATACTGCCAA
TATACTCGCAGTTGCCAGCTGACTTGCAAGCAAAGATATTCGAGAAAGCT
AAAGAGGGCACTCGCAAATGCATTGTTGCCACCAACATCGCTGAGACATC
GCTGACTGTAGATGGAATTTTTTATGTCATTGACACAGGTTATGGTAAAA
TGAAAGTTTACAACCCTAAGATGGGTATGGATGCTCTTCAAGTGTTCCCT
GTCAGCCGTGCTGCTGCTGATCAGCGAGCCGGACGTGCTGGTAGAACTGG
GCCTGGTACGTGTTATAGACTATATACGGAGAGTGCATACCTGAATGAAA
TGCTGCCCAGTCCTGTGCCGGAGATCCAGAGGACCAACCTTGGCAATGTG
GTGTTGTTGCTTAAGTCTCTTAAAATTGATAACCTGCTGGATTTTGATTT
CATGGACCCACCACCACAAGAAAACATCTTGAATTCTATGTACCAGTTGT
GGGTCTTGGGGGCACTTAACAATGTCGGGGCTTTGACTGACCTTGGCTGG
AAAATGGTGGAGTTCCCGCTGGACCCCCCACTTGCTAAGATGCTTTTGAT
GGGTGAACAGCTAGGATGCCTAGATGAGGTTTTGACAATTGTATCTATGC
TTTCAGTGCCATCAGTATTCTTCCGGCCTAAAGATAGGGCAGAGGAGAGT
GATGCAGCGAGAGAAAATTTTTCGTACAGGAATCTGACCACTTAACTCTG
CTTTATGTTTTACAGCATTGGAAAGAGCACCAGTATCGGGGGAGATTGGT
GTGAGGAACTTTACCTGCATGTTAAATCATAACGAAGGGCCAGAAAAGGT
GAAATCCCAGTTGCTGGATATTCCCAGGACGCTTAAAATCCCGCTAACAT
CCCGTGGGGCATGAATTTCAAAGTTGGTCAAAAAAACCATCTTGTTTGGC
TAACTTCCCAAAGGCCTGCAAAAAATAAAGGGGGGTGGGGGAAAAAAATT
AATTTGGGGGAAAGGGAAAGGCCTTTGTCCTCTCGCCCCCCCAAACAAGG
GGTCTTTTTTTGGGTGGTTGGGGGTTTAAACCCCCCCCGCAAAAAAGAGG
GGGTGTTTTTATATTCTAAAATATTAATATTTTTTTTTATAACACAAAAA
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