DY262933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX34_MOUSE (Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34 PE=2 SV=2) HSP 1 Score: 159.844 bits (403), Expect = 3.338e-38 Identity = 102/303 (33.66%), Postives = 151/303 (49.83%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQ--------AMTIHITSPP---GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFR 876 P+ +PGR FP+ +Y + + K I PP GD+L+F++G EI A Q +S T+ ++LP++S L Q K+F+ A G RKCI++TNIAETS+T+DGI +V+D+G K Y+P+ + LQ F +S CYRLY ES Y + P PVPEI+R L +V F F++PPP ++ ++ L GAL++ ALT +G + + P+D + KML++G + VLTI + LSV S F R Sbjct: 329 PVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEERGDLLVFLSGMAEITTVLDAA-----QAYASLTQR---WVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDY-DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRTFPFIEPPPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTR 622
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: HRPA_HAEIN (ATP-dependent RNA helicase hrpA homolog OS=Haemophilus influenzae GN=hrpA PE=3 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 2.476e-33 Identity = 101/317 (31.86%), Postives = 151/317 (47.63%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLYSKTPCEDYVEA--AVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGA-------LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFS 924 PI + GRT+PV Y ED + + A+ GDILIFM G+ EI AL+++ + ILP++++L A Q KIF + G + ++ATN+AETSLTV I YVID G ++ Y+ + + L + P+S C RLY+E + N PEI RTNL +V+ F F+D P + +I + + L LGA V LT +G ++ + P+DP LAKM+L GC+ E++ IVS LS+ RP+++ + SD F+ Sbjct: 252 PIIEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQAEGRGDILIFMNGEREIRDTAEALQKQ----------NLKHTEILPLFARLSAQEQNKIFHPS--GLNRIVLATNVAETSLTVPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDF-NSRPEFTDPEILRTNLASVILQMTALGLDDIEAFPFVDAPDERHIQDGVKLLEELGAFETVQTKSGEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQEKQQASDEKHRRFA 555
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHR1_YEAST (Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces cerevisiae GN=ECM16 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 4.669e-32 Identity = 82/241 (34.02%), Postives = 126/241 (52.28%), Query Frame = 1 Query: 148 GQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF 870 G+DE + +E E++++ L +LP+YS LP Q ++F+K +G+R CIVATN+AETSLT+ G+ YV+D+G K + YN G+ + +V VS CYRLY+ + + ++ PEI R + ++V F F PP + + ++ L LGAL+N +T+ G KM FPL P +KMLL+ ++ CL ++ IVS LSV F Sbjct: 704 GEDEEDEE----EEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIHNIINFPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACLPYIVAIVSALSVGDPF 940
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX57_HUMAN (Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57 PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 6.098e-32 Identity = 89/294 (30.27%), Postives = 145/294 (49.32%), Query Frame = 1 Query: 67 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV-----VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRN 933 + +EA ++ + + PPG IL+F+ G EI+ L E+++ R +I P++S L ++ Q +F K G K I++TNIAETS+T+D + YVID+G K K Y+ GM++L+ VS C+ L+T Y +++L +PEIQR L + + ++PP +++ S +L LGAL LT LG+ + P+D + K++L G CLD LTI + L+ S F P D+ EE++ + F++ N Sbjct: 829 ELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKM----LYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN 1118
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: HRPA_ECOLI (ATP-dependent RNA helicase hrpA OS=Escherichia coli (strain K12) GN=hrpA PE=3 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 1.040e-31 Identity = 101/317 (31.86%), Postives = 152/317 (47.95%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLYSKTPCE-DYVEAAVKQAMTIHITS----PPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN-----NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENF 921 PI + GRT+PV Y E D E QA+ + GDILIFM+G+ EI AL + + ILP+Y++L Q ++F+ R+ ++ATN+AETSLTV GI YVID G ++ Y+ + + L + P+S C RLY+E +L+ + PEI RTNL +V+ F F++ P + NI + + L LGA+ + LT LG ++ + P+DP LA+M+L ++ GC+ E + I S LS+ RP D+ + SD F Sbjct: 245 PIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALNKL----------NLRHTEILPLYARLSNSEQNRVFQS--HSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTD-PEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRF 548
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX57_MOUSE (Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57 PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 2.317e-31 Identity = 88/294 (29.93%), Postives = 145/294 (49.32%), Query Frame = 1 Query: 67 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV-----VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRN 933 + +EA ++ + PPG +L+F+ G EI+ L E+++ R +I P++S L ++ Q +F K G K I++TNIAETS+T+D + YVID+G K K Y+ GM++L+ VS C+ L+T Y +++L +PEIQR L + + ++PP +++ S +L LGAL LT LG+ + P+D + K++L+G CLD LTI + L+ S F P D+ EE++ + F++ N Sbjct: 831 ELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKM----LYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEFAFAN 1120
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX32_XENLA (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 OS=Xenopus laevis GN=dhx32 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.388e-31 Identity = 85/296 (28.72%), Postives = 151/296 (51.01%), Query Frame = 1 Query: 25 TFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYS-QLPADL--QAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESD 903 T V ++Y+ + DY +A++ IH T GDI++F+ ++EI+ A E ++Q E+ EL+ + +Y Q +D ++ + +K RK ++ T++ E+ + + IF+VID G K KVYN ++ ++L P+S + LY E + +EM P +++ NL ++V DF++ P E+++ ++ L L AL+N G L++ G M EFPLDP L+K +L + C+DE+LT+ +M++ P+ F A+E D Sbjct: 242 THSVESVYTTSLPRDYFHSALRLLFEIHHTKEKGDIVVFLACEEEIKRAY----EHIKQEALHMNPELGELMPIALYPHQSISDYIPYEELDDNSKNPKRKVVLTTSLGESLIWMKNIFFVIDVGIEKRKVYNTRIRAESLVTQPISKVRAKMRKHILSSSSEGKLFCLYPED-FAHEMKPFLTAKVEECNLISMVLFLKRMDIAGLAHCDFINRPDPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILAACEFDCVDEMLTLAAMVTAPNCFIDLPPEAKELD 532 HSP 2 Score: 23.483 bits (49), Expect = 4.388e-31 Identity = 8/17 (47.06%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 1049 VKSQLLDIPRTLKIPLT 1099 ++++LLDI R +++PLT Sbjct: 589 IRNELLDIMRRIELPLT 605 HSP 3 Score: 23.0978 bits (48), Expect = 4.388e-31 Identity = 8/21 (38.10%), Postives = 13/21 (61.90%), Query Frame = 3 Query: 915 KFFVQESDHLTLLYVLQHWKE 977 KFF E DH TL+ + +++ Sbjct: 538 KFFHPEGDHFTLINIYNEYEQ 558
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX32_HUMAN (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 OS=Homo sapiens GN=DHX32 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.502e-30 Identity = 93/358 (25.98%), Postives = 165/358 (46.09%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT---RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESD-AARENFSYRNLTT*LCFMFYSIGKSTSIGGD-------WCEELYLHVKS*RRA 1041 P+ + + PV +Y +D E+ ++ IH + GDI++F+ + +IE C + + S+ ++ EL+++P+Y + L + E K R+ ++ T+ E + + + +VID G + KVYNP++ ++L + P+S + LYTE +M P E+Q NL ++V DFM+ P E+++ ++ L L AL+N G L++ G M EFPLDP L+K +L + C+DEVLTI +M++ P+ F AEE+ + F + Y + T++ WC + +L+ + R A Sbjct: 233 PVIEVKNK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVCETVYQG-----SNLNPDLGELVVVPLYPKEKCSLFKPLDETEKRCQVYQRRVVLTTSSGEFLIWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTEEFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLGHCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPHGAEEAALTCWKTFLHPEGDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCSALRMA 584
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DQX1_MOUSE (ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 4.370e-30 Identity = 101/351 (28.77%), Postives = 159/351 (45.30%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTL-YSKTPCEDYVEAAVKQAMTI-HITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRARK 1047 PI +P TL Y T D VEAA + + + PGD+L+++ ++EI C +L M L P +LP++ +Q ++E RK +V +A+ S ++ I +VID+G VYNP++ ++ + P+S C RLY++S E P P P++ NL ++V F+D P E ++ ++ L L ALN+ G L+DLG + EFPL P LAK LL + C+DE+LT+ +ML+ F RP A E+ A R + + Y + WC+ L+ +S +ARK Sbjct: 217 PIVRVPREPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLCCESLSGEMGTLAVPG----PPPRVLPLHPGCAQAIQT-VYEDTDVSVRKIVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAESQVLRPISKCQAEARLLRAKGFPPGSCLRLYSKSTLELEAPPLPHPKVCEENLSSLVLLLMRKQIAEPGECHFLDRPAPEALMRALEDLDYLAALNDDGELSDLGVILSEFPLPPELAKALLASCEFNCVDEMLTLAAMLTAAPGFTRPPLSAGEA-ALRRALEHADGDHSSLIQVYEAFVQSGADEAWCQARGLNWESLCQARK 561
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX32_MOUSE (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 OS=Mus musculus GN=Dhx32 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 1.661e-29 Identity = 83/293 (28.33%), Postives = 144/293 (49.15%), Query Frame = 1 Query: 31 PVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGT---RKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEES 900 PV +Y +D E+ ++ IH + GD+++F+ + +IE E + Q S+ +V +L+++P+Y + L + E K R+ ++ T+ E+ + + +VID G + +VYNP++ ++L + P+S + LYTE +M P E+Q NL ++V DFM+ P E+++ ++ L L AL+N G L++ G M EFPLDP L+K +L + C+DE+LTI +M++ PS F AEE+ Sbjct: 242 PVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTY----ELVCQEGSNLNPDVGDLVVIPLYPKEKCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIWSHTVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFASKDMRPLKPAEMQEANLTSMVLFMKRVDIAGLGRCDFMNRPAPESLMQALEDLDYLAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEEA 530 The following BLAST results are available for this feature:
BLAST of DY262933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262933 ID=DY262933; Name=DY262933; organism=Citrus clementina; type=EST; length=1350bpback to top |