DY262933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX34_HUMAN (Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34 PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 2.832e-29 Identity = 74/204 (36.27%), Postives = 111/204 (54.41%), Query Frame = 1 Query: 286 IFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEE 897 +F+ A G RKCI++TNIAETS+T+DGI +V+D+G K Y+P+ + LQ F +S C+RLY ES Y + P PVPEI+R L ++V F F++PPP ++ ++ L GAL++ ALT +G + + P+D + KML++G ++ VLTI + LSV S F R + E Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY-DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSPFTRSAQSSPE 542
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DQX1_HUMAN (ATP-dependent RNA helicase DQX1 OS=Homo sapiens GN=DQX1 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.836e-28 Identity = 93/305 (30.49%), Postives = 146/305 (47.87%), Query Frame = 1 Query: 1 PIFHIPGRTFP-VNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAR 912 PI HIP + +Y T D VEAA + + + PGD+L+F+ ++EI C +L +E L+ + +P +LP++ +QA ++E RK +V +A+ S ++ I +VID+G VYNP++ + + P+S C LY +S E P P P + NL ++V F+D P E ++ ++ L L AL++ G L+DLG + EFPL P LAK LL + C+DE+LT+ +ML+ F RP AEE+ R Sbjct: 220 PIVHIPREPGERPSPIYWDTIPPDRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESLL---LQGLPPR-VLPLHPDCGRAVQA-VYEDMD--ARKVVVTHWLADFSFSLPSIQHVIDSGLELRSVYNPRIRAEFQVLRPISKCQAEARRLRARGFPPGSCLCLYPKSFLELEAPPLPQPRVCEENLSSLVLLLKRRQIAEPGECHFLDQPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPLSAEEAALRR 517
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX36_MOUSE (Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 6.015e-28 Identity = 84/271 (31.00%), Postives = 128/271 (47.23%), Query Frame = 1 Query: 124 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYT--ESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFS 924 G IL+F+ G D I + L+S + + LI+P++S +P Q ++F+K G RK ++ATNIAETS+T+D + YVID G K ++ + + + VS CY LY ++ L++ +PEI RT L + F MDPP E ++ S+ L L AL+ LT LG + P++P + KM+L G CLD VLTI + LS F P + + +DA R+ + Sbjct: 482 GAILVFLPGWDNISTL-------HDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY---QLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELA 742 HSP 2 Score: 25.0238 bits (53), Expect = 6.015e-28 Identity = 12/31 (38.71%), Postives = 19/31 (61.29%), Query Frame = 3 Query: 906 SERKFFVQE--SDHLTLLYVLQHWKEHQYRG 992 + RK +E SDHLT++ + W+E + RG Sbjct: 736 ARRKELAKETRSDHLTVVNAFEGWEEAKRRG 766
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX36_HUMAN (Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 7.829e-28 Identity = 84/271 (31.00%), Postives = 128/271 (47.23%), Query Frame = 1 Query: 124 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYT--ESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFS 924 G IL+F+ G D I + L+S + + LI+P++S +P Q ++F++ G RK ++ATNIAETS+T+D + YVID G K ++ + + + VS CY LY ++ L++ +PEI RT L + F MDPP E +L S+ L L AL+ LT LG + P++P + KM+L G CLD VLTI + LS F P + + +DA R+ + Sbjct: 489 GAILVFLPGWDNISTL-------HDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDY---QLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELA 749 HSP 2 Score: 24.6386 bits (52), Expect = 7.829e-28 Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 3 Query: 933 SDHLTLLYVLQHWKEHQYRG 992 SDHLT++ + W+E + RG Sbjct: 754 SDHLTVVNAFEGWEEARRRG 773
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DQX1_BOVIN (ATP-dependent RNA helicase DQX1 OS=Bos taurus GN=DQX1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.462e-27 Identity = 87/305 (28.52%), Postives = 145/305 (47.54%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNT-LYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAR 912 P +P +T T +Y + D V+AA + + PGD+L+++ ++EI C E + + + S + P +LP++ +QA ++E + G RK +V +A+ S ++ I +VID+G VY+P++ ++ + PVS C LY +S E P P + NL +++ F+D P E ++ ++ L L AL++ G L+DLG + EFPL P LAK LL + C+DE+LT+ +ML+ F RP AEE+ R Sbjct: 220 PTVCVPRKTGSCPTPVYRDSLPADRVDAACQAVLEWCQEEAPGDVLVYLPSEEEISLCC----ESLSRKVRSLENQGPPPRVLPLHPGCGQAVQA-VYEDTESGARKVVVTHWLADFSFSLPSIRHVIDSGLELRSVYSPQIRAESQVLRPVSKCQAEARRLRAAGIPPGSCLCLYPKSFLELEAPYLPQPRVWAENLSSLMLLLKRRQIAEPGKCHFLDRPAPEALMQALEDLDYLAALDDDGDLSDLGVILSEFPLAPELAKALLASCEFDCVDEMLTLAAMLTAAPGFTRPPVCAEEAALRR 519
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: YUM14_USTMA (Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis GN=UM11114 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 4.522e-27 Identity = 84/274 (30.66%), Postives = 133/274 (48.54%), Query Frame = 1 Query: 124 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNV---VXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNN----VGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFS 924 G IL+F G EI A A I+++ R ++ ILP+++ L AD Q ++F+ G RK +V+TN+AETS+T+ + YV+DTG K + P+ G+ L S C+RLY+ +M PE++R L ++ V +DPP ++ ++ L GAL + LT LG + + PLD LAK+L+MG GCL +LT+ S++S +F P ++ EE+ AR +F+ Sbjct: 1026 GAILVFCPGVGEIRQAIDA--------ITTSVRGQSKVEILPLHANLSADEQRRVFQPVGAGRRKIVVSTNVAETSITIPDVSYVVDTGRVKETRFEPESGLTRLVECWASRAACKQRRGRAGRVRAGECFRLYSRYVDEKKMAAQQTPEMRRVPLESLFLEVKSMREDEDVKEYLNKALDPPSLASMDAALTNLIEAGALQSDRGYKSRLTSLGKHLAQLPLDLRLAKLLIMGTIFGCLGPMLTVASIMSCKPLFNTPFEKREEASKARASFA 1291
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX37_HUMAN (Probable ATP-dependent RNA helicase DHX37 OS=Homo sapiens GN=DHX37 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.007e-26 Identity = 84/238 (35.29%), Postives = 116/238 (48.74%), Query Frame = 1 Query: 235 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGAL--------------NNVGA-LTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESD 903 L +LP+YS L + QA++F+ EGTR C+VATN+AETSLT+ GI YV+D G K + Y+ G+ + +V VS CYRLY+ SA + P PEI R + +++ F F PP E +L + L LGAL N + +T LG M FP+ P AKML + Q GCL +TIV+ ++V + F DR SD Sbjct: 588 LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYS-SAVFGDFEQFPPPEITRRPVEDLILQMKALNVEKVINFPFPTPPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSCPITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVREL-FEELDRPAASD 823
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX29_MOUSE (ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.262e-23 Identity = 82/271 (30.26%), Postives = 123/271 (45.39%), Query Frame = 1 Query: 124 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFS 924 G +LIF+ G I+ ++ L+SS R E ++ ++S L QA F G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS C+RLYT + L VPEI R L + F +DPP + I N+M L +GA N LT LG + P++ + KML+ G GCL+ V T+ ++++ S F P R +E+D A+ + + Sbjct: 867 GAVLIFLPGLAHIQ--------QLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTRERF-EGFLDYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSLA 1128 HSP 2 Score: 24.2534 bits (51), Expect = 2.262e-23 Identity = 10/23 (43.48%), Postives = 13/23 (56.52%), Query Frame = 3 Query: 924 VQESDHLTLLYVLQHWKEHQYRG 992 V +SDHLT+ WK+ Q G Sbjct: 1129 VADSDHLTIYNAYLGWKKAQQEG 1151
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: YG65_SCHPO (Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe GN=SPBC15C4.05 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 3.033e-23 Identity = 80/281 (28.47%), Postives = 132/281 (46.98%), Query Frame = 1 Query: 130 ILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRNLTT*LCFMFYS 966 +L+F+ G EI +K +E + R + I ++S L + Q +F +G RK +++TNIAET +T+ + VIDTG + YN + + L VS CY L+++ + + L PEI R NL VV +DPP NI+ ++ +L +GAL+ LT LG + + P+D L K+L++G C+D +IV+ML++ S F + D ++ AR +F+ N + L M+Y+ Sbjct: 906 VLVFLPGISEI----LRVKSLIEDM--PMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGDVQDVLGKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYKCVDAASSIVAMLTIGSPFRKSVDNEFSANKARLSFAKENTRSDLVLMYYA 1180
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX30_CHICK (Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.962e-23 Identity = 89/325 (27.38%), Postives = 143/325 (44.00%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLY--------------------SKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVV---XXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA 906 P+ +PG +PV Y S C ++ + I PG IL F+ G EI+ +++R+ +++ S L+LP++S +P Q IF++ G RK ++ATNIAETS+T++ I +V+D+G K + Y+ K + L+ VS Y L+ S L++M VPEI RT L N+V +D P + + ++ L +G L+ ALT LG ++ + DP LAK +++ CL +L IVS L+ ++RAE A Sbjct: 651 PVVKVPGFMYPVKEYYLEEILAKLGRHRHRHYEIKQSDDECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKG----VQQRLLEMLGSQNSRY---LVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSR-LDKMPTYQVPEILRTPLENLVVQAKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYRCLHPLLVIVSCLTRDPFSSSLQNRAEVDKA 967 The following BLAST results are available for this feature:
BLAST of DY262933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262933 ID=DY262933; Name=DY262933; organism=Citrus clementina; type=EST; length=1350bpback to top |