DY262933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX30_RAT (Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus GN=Dhx30 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.174e-23 Identity = 89/323 (27.55%), Postives = 144/323 (44.58%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLY---------------------SKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 894 P+ +PG +PV Y S+ C ++ + I PG IL F+ G EI+ +++R+++ + + LILP++S +P Q IF++ G RK ++ATNIAETS+TV+ I +V+D+G K + Y+ K + L+ VS Y L+ S L +M+P VPEI RT L N+V +F+ D P + + ++ L +G L+ LT LG ++ DP LAK +++ CL +L +VS L+ ++RAE Sbjct: 607 PVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKG----VQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSR-LEKMVPFQVPEILRTPLENLV-LQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSSSLQNRAE 920
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX30_MOUSE (Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.174e-23 Identity = 89/323 (27.55%), Postives = 144/323 (44.58%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLY---------------------SKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 894 P+ +PG +PV Y S+ C ++ + I PG IL F+ G EI+ +++R+++ + + LILP++S +P Q IF++ G RK ++ATNIAETS+TV+ I +V+D+G K + Y+ K + L+ VS Y L+ S L +M+P VPEI RT L N+V +F+ D P + + ++ L +G L+ LT LG ++ DP LAK +++ CL +L +VS L+ ++RAE Sbjct: 630 PVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKG----VQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSR-LEKMVPFQVPEILRTPLENLV-LQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSSSLQNRAE 943
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX30_HUMAN (Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.174e-23 Identity = 88/323 (27.24%), Postives = 144/323 (44.58%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLY---------------------SKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 894 P+ +PG +PV Y S+ C ++ + I PG IL F+ G EI+ +++R+++ + + LILP++S +P Q IF++ G RK ++ATNIAETS+T++ I +V+D+G K + Y+ K + L+ VS Y L+ S L +M+P VPEI RT L N+V +F+ D P + + ++ L +G L+ LT LG ++ DP LAK +++ CL +L +VS L+ ++RAE Sbjct: 607 PVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKG----VQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSR-LEKMVPFQVPEILRTPLENLV-LQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSSSLQNRAE 920
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX30_BOVIN (Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 1.153e-22 Identity = 88/323 (27.24%), Postives = 143/323 (44.27%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLY---------------------SKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 894 P+ +PG +PV Y S+ C ++ + I PG IL F+ G EI+ +++R+++ + + LILP++S +P Q IF++ G RK ++ATNIAETS+T++ I +V+D+G K + Y+ K + L+ VS Y L+ S L +M P VPEI RT L N+V +F+ D P + + ++ L +G L+ LT LG ++ DP LAK +++ CL +L +VS L+ ++RAE Sbjct: 633 PVIKVPGFMYPVKEHYLEDILAKLGKHQYPHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKG----VQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSR-LEKMAPFQVPEILRTPLENLV-LQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSSSLQNRAE 946
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX30_PONAB (Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.354e-22 Identity = 87/323 (26.93%), Postives = 143/323 (44.27%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLY---------------------SKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAE 894 P+ +PG +PV Y S+ C ++ + I PG IL F+ G EI+ +++R+++ + + LILP++S +P Q IF++ G RK ++ATNIAETS T++ I +V+D+G K + Y+ K + L+ VS Y L+ S L +M+P VPEI RT L N+V +F+ D P + + ++ L +G L+ LT LG ++ +P LAK +++ CL +L +VS L+ ++RAE Sbjct: 607 PVIKVPGFMYPVKEHYLEDILAKLGKHQYLHRHRHHESEDECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKG----VQQRLQEALGM---HESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSR-LEKMVPFQVPEILRTPLENLV-LQAKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFRCLHPLLVVVSCLTRDPFSSSLQNRAE 920
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: MLE_DROME (Dosage compensation regulator OS=Drosophila melanogaster GN=mle PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 4.092e-22 Identity = 77/274 (28.10%), Postives = 128/274 (46.72%), Query Frame = 1 Query: 64 EDYVEAAVKQAMTIHITSP--PGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFF 873 E V + +A+ +HI S PG IL+F+ G + I FAL + ++ ++ + + ILP +SQ+P D Q K+FE EG K I++TNIAETS+T+D I +VID +MK++ + + S C+ L + + + + + PE+ RT L + F ++PPP + ++ + L + L+ LT LG + P++P L KM+++G GC D + + S S S F Sbjct: 632 ESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLI----FALMKFLQN--TNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARF-QALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVF 898 HSP 2 Score: 22.7126 bits (47), Expect = 4.092e-22 Identity = 7/20 (35.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 933 SDHLTLLYVLQHWKEHQYRG 992 SDH+ ++ Q W+ + RG Sbjct: 920 SDHVAMIVASQMWRREKQRG 939
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: YTDC2_HUMAN (Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 4.380e-22 Identity = 85/312 (27.24%), Postives = 148/312 (47.44%), Query Frame = 1 Query: 124 GDILIFMTGQDEIEAACFALKERM----EQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA--ARENFSYRNLTT*LCFM--FYSIGKSTSIGGD--WCEELYL 1017 G +LIF+ G DEI L++R+ ++ ST R + ++S + Q K+ + G RK I++TNIAETS+TV+ + +VID+G K K ++ + L++ +S C+RL++ + N ML PE+ R L + DF+ +PPP + N++ L + A++ LT+LG+ + + P++P L KM+L L CLD +LTI L+ F P +++ A R+ F+ + + + F + K+ S G + +CE+ +L Sbjct: 623 GAVLIFLPGYDEI----VGLRDRILFDDKRFADSTHR----YQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELCLHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMALLRAFQAWQKARSDGWERAFCEKNFL 925
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: KZ_DROME (Probable ATP-dependent RNA helicase kurz OS=Drosophila melanogaster GN=kz PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 5.720e-22 Identity = 73/240 (30.42%), Postives = 110/240 (45.83%), Query Frame = 1 Query: 235 LLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNV--------GALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYR 930 L +LP+YS L ++ Q +IF +G R C+V+TN+AETSLT+ I YV+D G K ++Y+ G+ A V S CYRLY+ + Y + P+IQ+ + +++ F F PP Q + + +L VLGAL A+T LG + FP+ P KML + Q L + +V+ LSV V + +E A N +R Sbjct: 617 LWVLPLYSLLSSEKQNRIFLPVPDGCRLCVVSTNVAETSLTIPHIKYVVDCGRQKTRLYDKLTGVSAFVVTYTSKASADQRAGRAGRISAGHCYRLYSSAVYNDCFEDFSQPDIQKKPVEDLMLQMRCMGIDRVVHFPFPSPPDQVQLQAAERRLIVLGALEVAKTENTDLPPAVTRLGHVISRFPVAPRFGKMLALSHQQNLLPYTVCLVAALSVQEVLIETGVQRDEDVAPGANRFHR 856
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX29_HUMAN (ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.919e-22 Identity = 80/267 (29.96%), Postives = 121/267 (45.32%), Query Frame = 1 Query: 124 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELL-ILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAR 912 G +LIF+ G I+ ++ L+S+ R E ++ ++S L QA F G RK ++ATNIAET +T+ + +VIDTG K Y+ M +L VS C+R+YT + + VPEI R L + F +DPP + I N+M L +GA N LT LG + P++ + KML+ G GCLD V T+ ++++ S F P R +E+D A+ Sbjct: 868 GAVLIFLPGLAHIQ--------QLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERF-EGFMDYSVPEILRVPLEELCLHIMKCNLGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAK 1125 HSP 2 Score: 21.557 bits (44), Expect = 6.919e-22 Identity = 8/21 (38.10%), Postives = 12/21 (57.14%), Query Frame = 3 Query: 930 ESDHLTLLYVLQHWKEHQYRG 992 +SDHLT+ WK+ + G Sbjct: 1132 DSDHLTIYNAYLGWKKARQEG 1152
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: YTDC2_MOUSE (Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 7.471e-22 Identity = 83/308 (26.95%), Postives = 143/308 (46.43%), Query Frame = 1 Query: 124 GDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFM----DPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDA--ARENFSYRNLTT*LCFM--FYSIGKSTSIGGD--WCEELYL 1017 G ILIF+ G DEI L++R+ + ++S + Q K+ + G RK I++TNIAETS+TV+ + +VID+G K K ++ + L++ +S C+RL++ + N ML PE+ R L + DF+ +PPP + N++ L + A++ LT+LG+ + + P++P L KM+L L CLD +LTI L+ F P +++ A R+ F+ + + + F + K+ S G + +CE+ +L Sbjct: 638 GAILIFLPGYDEI----VGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQN-MLEFQTPELLRMPLQELCLHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRAFQAWQKARSDGWERAFCEKNFL 940 The following BLAST results are available for this feature:
BLAST of DY262933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262933 ID=DY262933; Name=DY262933; organism=Citrus clementina; type=EST; length=1350bpback to top |