DY262933
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX9_XENLA (ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.357e-21 Identity = 80/296 (27.03%), Postives = 141/296 (47.64%), Query Frame = 1 Query: 52 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRN 933 +TP E +EA +K T+++ PG +L+F+ G + I +A+++ +E + ILP++SQ+P D Q K+F+ +G K I++TNIAETS+T++ + YVID+ K+K++ M S C+ L +++ + +++ PEI RT L V F ++PPP + ++ + + L L AL++ LT LG + + P++P L KM+++G D + TI + P F S+ R + +RN Sbjct: 633 ETPLE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YAMQKHLEMNPHFGSHSY---CILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARF-DKLETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFI--------SEGRRLGYVHRN 908 HSP 2 Score: 22.3274 bits (46), Expect = 3.357e-21 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 933 SDHLTLLYVLQHWKEHQYRG 992 SDH+ LL V Q W + + G Sbjct: 915 SDHVALLSVFQAWDDARMGG 934
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: RHA2_CAEEL (Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans GN=rha-2 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 1.079e-20 Identity = 64/230 (27.83%), Postives = 106/230 (46.09%), Query Frame = 1 Query: 190 RMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALN-------NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSV 858 ++E I + + L LP+YS L Q ++F++ G R C+++TN+AETSLT+ G+ YVID G+ K ++Y+ G+ V +S YRLY+ + Y + + PEI +V F F P ++ + ++ +L LGAL+ +T LG + FPL P AK + M +Q + + ++S+LSV Sbjct: 560 KVENSIGAPPADCEPLYCLPLYSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVSRFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVY-QDFVKFADPEILSKPADQLVLHLKSMNIVKVVNFPFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTLAVFPLAPSYAKFIAMADQHNLMSHAILLISLLSV 788
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX29_XENLA (ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.409e-20 Identity = 77/275 (28.00%), Postives = 124/275 (45.09%), Query Frame = 1 Query: 124 GDILIFMTGQDEIEAACFALKERMEQLISSTTR--EVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALN-NVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRN 933 G +LIF+ G +I+ ++ ++SS R + ++ ++S L + QA+ F GTRK ++ATNIAET +T+ + +VID G K Y+ M +L +S C+RLYT + + VPEI R L + F +DPP + I N+M L +GA + LT LG + P++ + KML+ G GCLD V T+ + ++ S F P + +D A+ + + N Sbjct: 862 GAVLIFLPGLADIQ--------QLYDILSSDKRFHDRRRYKLIALHSILSSQDQAEAFILPPAGTRKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETFISKASALQRQGRAGRVRNGYCFRLYTRERF-ESFMEYSVPEILRVPLEELCLHIMKCDLGSPEDFLSKALDPPQLQVISNAMSLLRKIGACELSQPKLTPLGQHLAALPVNVKIGKMLIFGAIFGCLDAVATLAATMTEKSPFVTPIGEKDRADLAKSSMAVAN 1127
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: YL419_YEAST (Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces cerevisiae GN=YLR419W PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.403e-20 Identity = 76/268 (28.36%), Postives = 126/268 (47.01%), Query Frame = 1 Query: 67 DYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVG-ALTDLGWKMVEFP-LDPPLAKMLLMGEQLGCLDEVLTIVSMLSV 858 +YV +K A + G I++F+ G EI C L+++ + E + ++LP++S L + Q ++F+K G RK +V+TNIAETS+T+D IDTG K YNPK L +S Y+L++++ Y N+M+ P+PEI+R L ++ F +D PP + + L +G ++ +LT LG + P +D K+L+ G GC D + +VS+L + Sbjct: 851 EYVHKRLKAA------NDNGSIIVFLPGVGEINKCC--------NLLANKSNEA-DFMVLPLHSALTPEDQKRVFKKY-HGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGI 1102
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX9_MOUSE (ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 2.745e-20 Identity = 78/296 (26.35%), Postives = 136/296 (45.95%), Query Frame = 1 Query: 52 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRN 933 +TP E +EA +K T+++ PG +L+F+ G + I + +++ +E + ILP++SQ+P + Q K+F+ +G K I++TNIAETS+T++ + YVID+ K+K++ M S C+ L + + + + + PE+ RT L + F ++PPP + I+ + + L L AL+ LT LG + + P++P KM++MG D V TI + P F S+ R + +RN Sbjct: 633 ETPFE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YTMQKHLENNSHFGSHRYQ---ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-DRLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFI--------SEGKRLGYIHRN 908 HSP 2 Score: 22.7126 bits (47), Expect = 2.745e-20 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 933 SDHLTLLYVLQHWKEHQYRG 992 SDH+ LL V Q W + + G Sbjct: 915 SDHVALLSVFQAWDDARMSG 934
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX9_PONAB (ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.249e-19 Identity = 73/281 (25.98%), Postives = 128/281 (45.55%), Query Frame = 1 Query: 52 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 888 +TP E +EA +K T+++ PG +L+F+ G + I + +++ +E + ILP++SQ+P + Q K+F+ G K I++TNIAETS+T++ + YVID+ K+K++ M S C+ L + + + + PE+ RT L + F ++PPP + ++ + + L L AL+ LT LG + + P++P KM++MG D + TI + P F R Sbjct: 631 ETPFE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YTMQKHLEMNPHFGSHRYQ---ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-ERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGKR 899 HSP 2 Score: 22.3274 bits (46), Expect = 2.249e-19 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 933 SDHLTLLYVLQHWKEHQYRG 992 SDH+ LL V Q W + + G Sbjct: 913 SDHVALLSVFQAWDDARMGG 932
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX9_HUMAN (ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4) HSP 1 Score: 95.5153 bits (236), Expect = 2.249e-19 Identity = 73/281 (25.98%), Postives = 128/281 (45.55%), Query Frame = 1 Query: 52 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDR 888 +TP E +EA +K T+++ PG +L+F+ G + I + +++ +E + ILP++SQ+P + Q K+F+ G K I++TNIAETS+T++ + YVID+ K+K++ M S C+ L + + + + PE+ RT L + F ++PPP + ++ + + L L AL+ LT LG + + P++P KM++MG D + TI + P F R Sbjct: 631 ETPFE-LIEALLKYIETLNV---PGAVLVFLPGWNLI----YTMQKHLEMNPHFGSHRYQ---ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-ERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFINEGKR 899 HSP 2 Score: 22.3274 bits (46), Expect = 2.249e-19 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 933 SDHLTLLYVLQHWKEHQYRG 992 SDH+ LL V Q W + + G Sbjct: 913 SDHVALLSVFQAWDDARMGG 932
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: UCP12_SCHPO (Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces pombe GN=ucp12 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.657e-19 Identity = 98/389 (25.19%), Postives = 153/389 (39.33%), Query Frame = 1 Query: 10 HIPGRTFPVNTLY--------SKTPCEDYVEAAVKQAMTI--------------HITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFD-------------FMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVF--------FRPKDRAEESDAARENFSYRNLTT*LCFMFYSIGKSTSIGGDWCEELYLHVKS*RRARK 1047 HI GRTFP+ Y ++ E+ V K+ I + S G IL+F+ G I +K +++ + +LP+++ L Q + F+ + RK I ATNIAETS+T+D + VID+G K Y+ + + + S CY+LYT ML PE+ RT L V + +DPP + ++ +L +GAL LT LG +V P+D L K+L+ G G L+ LTI ++LS S F R K D + Y N + + G ++ WCEE++LH + ++ R+ Sbjct: 754 HIHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKKKEYEIDYHLISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIK----------SKDGSKFEVLPLHASLNTSEQRRCFKTYTK--RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIFGYLEPALTITAILSTKSPFLGDDEAREIRSKQSQGWGDVLADARVYHNWLE----ILETRGVKKTV--QWCEEMHLHYTTLQQIRQ 1124
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: DHX9_BOVIN (ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.087e-18 Identity = 75/296 (25.34%), Postives = 133/296 (44.93%), Query Frame = 1 Query: 52 KTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXF--DFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLLMGEQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAARENFSYRN 933 +TP E +EA + T+++ PG +L+F+ G + I + +++ +E + ILP++SQ+P + Q K+F+ G K I++TNIAETS+T++ + YVID+ K+K++ M S C+ L + + + + PE+ RT L + F ++PPP + ++ + + L L AL+ LT LG + + P++P KM++MG D + TI + P F S+ R + +RN Sbjct: 628 ETPFE-LIEALLLYIETLNV---PGAVLVFLPGWNLI----YTMQKHLEMNPHFGSHRYQ---ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARF-ERLETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFI--------SEGKRLGYIHRN 903 HSP 2 Score: 22.3274 bits (46), Expect = 1.087e-18 Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3 Query: 933 SDHLTLLYVLQHWKEHQYRG 992 SDH+ LL V Q W + + G Sbjct: 910 SDHVALLSVFQAWDDARMGG 929
BLAST of DY262933 vs. ExPASy Swiss-Prot
Match: HRPB_ECOLI (ATP-dependent RNA helicase hrpB OS=Escherichia coli (strain K12) GN=hrpB PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 1.722e-18 Identity = 77/266 (28.95%), Postives = 114/266 (42.86%), Query Frame = 1 Query: 1 PIFHIPGRTFPVNTLYSKTPCEDYVEAAVKQAMTIHITSPPGDILIFMTGQDEIEAACFALKERMEQLISSTTREVPELLILPIYSQLPADLQAKIFEKAKEGTRKCIVATNIAETSLTVDGIFYVIDTGYGKMKVYNPKMGMDALQVFPVSXXXXXXXXXXXXXXXXXXCYRLYTESAYLNEMLPSPVPEIQRTNLGNVVXXXXXXXXXXXXXFDFMDPPPQENILNSMYQLWVLGALNNVGALTDLGWKMVEFPLDPPLAKMLL 798 P+ GR+FPV Y P + AV A + G +L+F+ G EI+ EQL S +V L+ P+Y L + Q K A +G RK ++ATNIAETSLT++GI V+D ++ ++P+ G+ L VS L + S PEI +++L ++ ++D PP N+L + L +LGAL L+ G KM DP LA ML+ Sbjct: 172 PVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRV-------QEQLASRIGSDV---LLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGISLHLIAKEQAERAAAQSE-PEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPVVNLLAAKRLLQMLGALEG-ERLSAQGQKMAALGNDPRLAAMLV 425 The following BLAST results are available for this feature:
BLAST of DY262933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262933 ID=DY262933; Name=DY262933; organism=Citrus clementina; type=EST; length=1350bpback to top |