DY262934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA_MIMIV (Probable DNA polymerase sliding clamp OS=Acanthamoeba polyphaga mimivirus GN=PCNA PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 2.722e-16 Identity = 70/294 (23.81%), Postives = 134/294 (45.58%), Query Frame = 2 Query: 17 KMLELRLVQGSLLKKVLEAIKELVND-------ANFDCSATG-----FSLQAMDSSHV------------------------ALVALLLRSEGFEHYRCDR-NISMGMNLNNVSKMLKCAGNDD--IITLKAD-DGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAP 778 K+LE+R Q LK+V E + +++D A+ D + G + ++ SSH LV ++L + FE++RCD I++G++++ + LK +DD +I +K D GS + + E+ + + E+ LMDI + + +P+ E+ + M S +F ICK L+ V I+ + F + + G + + K + +I+ + LR + F++ L NT+ I L ++ P+V+ +A +G + +L+P Sbjct: 172 KVLEIRTTQTGALKQVFERVSGVISDCCLTFMPADKDINNAGDDNEYYEDESTKSSHKQSKTTDRPKNTGGIRIIRLTEDNNTLVKVVLEAANFEYFRCDEPKITVGVDMHTLHSHLKMINDDDPIVIYMKKDIQGSLYIRSLSENNDNSEEREIELFLMDIINPEIPVPKTEFQNRITMKSDKFHLICKHLSQNSTFVEITSINNEILFKGQSEGGKVTMTYKDTGYKKKEKPDQVIQG------VYELRNLLGFSKCNKLCNTIEIYLKNDFPLVLVISVATLGKMYVFLSP 459
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA1_SULOH (DNA polymerase sliding clamp A OS=Sulfurisphaera ohwakuensis GN=pcnA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.722e-16 Identity = 59/244 (24.18%), Postives = 118/244 (48.36%), Query Frame = 2 Query: 53 LKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKI 784 LK +++A+ +LV++A FD G L A+D +H++L+ + L E F+ Y G N +SK+LK A + I ++AD S V + S +++ F + +++ + E+ + ++ F ++A + DT++IS +E V G+ + ++T IE ++ S + + Y+N T LS+ V ++ + + P+ +E+ + G + + LAPK+ Sbjct: 11 LKAIVQALLKLVDEALFDIKPEGIQLVAIDKAHISLIKIELPKEMFKEYDVPEEFKFGFNTQYMSKLLKAAKRKEEIIIEAD--SPEVVKLTLSGALNRV--FNVNNIEVLPPEVPEVNLEFDIKATINASGFKNAIGEIAEVADTLLISANEEKVIVKGEGE-NKVEVEFSKDT-----GSLADIEFNKESSSAYDVEYLNDIISLTKLSDYVKVAFAEQKPMQLEFNMEGGGKVTYLLAPKL 244
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA_HALWD (DNA polymerase sliding clamp OS=Haloquadratum walsbyi (strain DSM 16790) GN=pcn PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.555e-16 Identity = 66/256 (25.78%), Postives = 121/256 (47.27%), Query Frame = 2 Query: 35 LVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDS--EHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAE-MGYIRFYLAPKIEED 793 +V S L+ L+++ LV++ + +++A+D ++V +V L L + FE Y D + +G+NL+ + + A D ++ L+ D+ + + + + + L+D DS + IP+ + A + + A+ R K + D V + V + + + T ++ R +T ++ + E SL F+L Y+ +A P VTI L E PV V Y IAE G I + LAP+I+ D Sbjct: 5 IVGASTLQDALDSVSVLVDECKIRLNEGELAIRAVDPANVGMVDLALDTAAFESYTADDGV-IGVNLSKLEDFIGMASGDQLVELELDEETRKLNIQMDGLSST------LALIDPDSIRQEPDIPDLDLAAEIMLEGAQLDRGIKAADMVSDHVRLRVASDTEAYHIEAEGDTDDVDFRLDT-----DDLIALTAGEADSL-FSLDYLKDMNKAIPKDAEVTIELGQEFPVKVHYGIAEGYGEITYMLAPRIQSD 247
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA_ARCFU (DNA polymerase sliding clamp OS=Archaeoglobus fulgidus GN=pcn PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 6.065e-16 Identity = 67/260 (25.77%), Postives = 120/260 (46.15%), Query Frame = 2 Query: 35 LVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLG----IPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMH--EPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYK-IAEMGYIRFYLAPKIEED 793 ++ G LLK V AI LV++A G +A+D ++VA+V + + + FE Y D ++G++++ + + K D++ L +D ES + K E K+ ID + IPE E A + M + EF + I D V+ KEG + +GD+ ++ V E +IE + E S+ F++ Y+ F + + +TI L + PV + ++ + + + LAP+IE + Sbjct: 5 IMTGELLKTVTRAIVALVSEARIHFLEKGLHSRAVDPANVAMVIVDIPKDSFEVYNIDEEKTIGVDMDRIFDISKSISTKDLVELIVED---------ESTLKVKFGSVEYKVALIDPSAIRKEPRIPELELPAKIVMDAGEFKKAIAAADKISDQVIFRSDKEGFRIEAKGDV---------DSIVFHMTETELIEFNGGEARSM-FSVDYLKEFCKVAGSGDLLTIHLGTNYPVRLVFELVGGRAKVEYILAPRIESE 245
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA_THEON (DNA polymerase sliding clamp OS=Thermococcus onnurineus (strain NA1) GN=pcn PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.920e-16 Identity = 56/243 (23.05%), Postives = 109/243 (44.86%), Query Frame = 2 Query: 62 VLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEE 790 ++ L+++A F + G S++AMD S V L+ L L F Y + ++G+N+++ K+LK N D + L+ D + + FE + F + L++++ L +PE + A V + KD + + D + + G+ I L + E +E+ E + + Y+ + ++ V I +E+P+ +EY I + G + F LAP++E+ Sbjct: 16 LIATASNLIDEAAFKITEEGISMRAMDPSRVVLIDLNLPESIFSKYEVEEEETVGINMDHFKKILKRGKNKDTLILRKGD-ENFLEITFEGTAK---RTFRLPLIEVEELELDLPELPFTAKVVVLGEVLKEAVKDASLVSDALKFIARENEFIMKAEGETNEVEIKLTL-----EDEGLLDLEVEEETKSAYGISYLADMIKGIGKADEVIIRFGNEMPLQMEYPIRDEGKLIFLLAPRVED 249
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA1_SULTO (DNA polymerase sliding clamp A OS=Sulfolobus tokodaii GN=pcnA PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 3.010e-15 Identity = 58/244 (23.77%), Postives = 116/244 (47.54%), Query Frame = 2 Query: 53 LKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKI 784 LK +++A+ +LV++A FD G L A+D +H++L+ + L E F+ Y G N +SK+LK A + I + AD S V + S +++ F + +++ + E+ + ++ ++A + DT++IS +E V G+ + ++T IE ++ S + + Y+N T LS+ V ++ + + P+ +E+ + G + + LAPK+ Sbjct: 11 LKAIIQALLKLVDEALFDIKPEGIQLVAIDKAHISLIKIELPKEMFKEYDVPEEFKFGFNTQYMSKLLKAAKRKEEIIIDAD--SPEVVKLTLSGALNRV--FNVNNIEVLPPEVPEVNLEFDIKATINASGLKNAIGEIAEVADTLLISGNEEKVVVKGEGE-NKVEVEFSKDT-----GSLADIEFNKESSSAYDVEYLNDIISLTKLSDYVKVAFADQKPMQLEFNMEGGGKVTYLLAPKL 244
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA_HALLT (DNA polymerase sliding clamp OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=pcn PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.494e-14 Identity = 63/256 (24.61%), Postives = 117/256 (45.70%), Query Frame = 2 Query: 35 LVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDS--EHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAE-MGYIRFYLAPKIEED 793 +V S L+ L+++ LV++ + S++A+D ++V +V L L + FE Y D + +G+NL + + A + D+I L+ ++ + + + + + L+D DS + IP+ + + + + A+ R + D + + V + F + T ++ LR E I P F+L Y+ +A P VTI L E PV + Y AE +G++ F LAP+I+ D Sbjct: 5 IVGASTLQDALDSVSVLVDECKIRLNDEELSIRAVDPANVGMVDLTLEAAAFESYEADGGV-IGVNLARLEDIAGMANSGDLIHLELNEETRKLHIEIDG------LSYTLALIDPDSIRQEPDIPDLDLASEIVVEGAQINRGITAADMVSDHIRLRVDETDEAFFIEAEGDTDDVDLRL------AREDLIALTAGPADSLFSLDYLKDMNKAIPSDAEVTIELGEEFPVKLHYGFAEGLGHVTFMLAPRIQSD 247
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA_METKA (DNA polymerase sliding clamp OS=Methanopyrus kandleri GN=pcn PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 7.413e-14 Identity = 66/263 (25.10%), Postives = 122/263 (46.39%), Query Frame = 2 Query: 20 MLELRLVQ--GSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRN-ISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATI-IEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKI--AEMGYIRFYLAPKIEE 790 M+E R Q K A ++V +A + G +AMD+SH+A+ L + E F+ Y + + G+++ V+++++ A D ITL+ +D + + + S + +F ++ +DID + PE ++ V + +D + DTV + F G+ G R V + EA + E+ E V + L Y+ +A + +V I L ++P+ + ++I A G + FYLAP++EE Sbjct: 1 MVEFRAYQEEARYFKYAFNAAGKVVEEAPLIVTENGIVSRAMDASHIAMAVLEMPWEMFDEYEPPSDELMYGLDMEEVTRIVRRARVTDEITLEGEDEEEVIIKLGSSGYE---REFRLRSIDID-DIPDEPELDFAVEVTVVPDFIQDAVRDADLVSDTVKVGAKGNTFYFKAEGERG------RVIPKVQEGAEALLTFEVEEDVETAYPLDYLKDMIQAAQGAESVRIRLGQDMPLELTFRIGPAGEGKLTFYLAPRVEE 253
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA_THESM (DNA polymerase sliding clamp OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=pcn PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.265e-13 Identity = 51/243 (20.99%), Postives = 108/243 (44.44%), Query Frame = 2 Query: 62 VLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEE 790 +++ L+++A F + G S++AMD S V L+ L L + F Y D ++G+N+++ K+LK DI+ L+ + + + E + F + L++++ L +PE + + KD + + D++ + G+ I L + E + + E + + Y+ + ++ V + +E+P+ ++Y I + G + F LAP++EE Sbjct: 16 LIDTASNLIDEAAFKIAEEGMSMRAMDPSRVVLLDLNLPASIFSKYDIDGEETVGVNMDHFKKVLKRGKGKDILVLRKGE-ENFLEITLEGTAK---RTFRLPLIEVEELELDLPELPFTVRAVILGEVLKEAVKDASLVSDSIKFIAKENEFIMKAEGETQEVEIKLTL-----EDEGLLDLNVEEETKSAYGVSYLADMAKGIGKADEVVLRFGNEMPLQMDYPIRDEGRLTFLLAPRVEE 249
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA3_SULTO (DNA polymerase sliding clamp C OS=Sulfolobus tokodaii GN=pcnC PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 6.276e-13 Identity = 50/259 (19.31%), Postives = 114/259 (44.02%), Query Frame = 2 Query: 23 LELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEA--EYHAIVRMPSAEFARICKDLASIG-DTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHE-PVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIE 787 + ++++ + ++E +++ D ++ G ++ +D S V + +L+ + FE Y ++ +G+ L + + +LK +D + L+ D+ + T D + + I + + P E+ + + F I ++ IG D++ + S D+G++ I L E ++E + L Y+ + ++ S+TV I+ S++P+ + Y + + GY FY+AP+ E Sbjct: 1 MRVKVIDADAFSYIFRTLEEFIDEITLDFTSDGLKIRGIDPSRVTFIDILIPAGYFEEYNVEKEEKVGVKLEDFTDVLKTVTKNDSLYLETDENQNIKV------TLDGVYERTFTFPSIVASEIETPNLNLEFPFKAKALTVTFTDIIDEIEDIGGDSITFKAEGGKLYLSANSDMGSSTIEL-------STENGGLLESEGGDAESVYGLEYVVNTSKMRKPSDTVEIAFGSQIPLKLRYNLPQGGYADFYIAPRAE 246 The following BLAST results are available for this feature:
BLAST of DY262934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262934 ID=DY262934; Name=DY262934; organism=Citrus clementina; type=EST; length=1100bpback to top |