DY262934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA3_AERPE (DNA polymerase sliding clamp B2 OS=Aeropyrum pernix GN=pcnB2 PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 6.276e-13 Identity = 57/243 (23.46%), Postives = 111/243 (45.68%), Query Frame = 2 Query: 62 VLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCD-RNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIE 787 ++ +I++++ + F + G SL+A+D+SHVA+V L + F Y ++ G++ + +SK+L+ A +D + L+ + V +I M E L P+ + RM + F +DL +T+ + ++ + ++ T I L Q+ EA E + S +++ Y + A ++ V +S S + PV V+ + G + FY++PKIE Sbjct: 17 MVASIEKIIEEGVFVATGEGLSLRALDTSHVAMVDLYYPNTAFIEYDIGGESVEFGVSFDLLSKVLRRARKEDELVLEVEGSRLAVKLKSRGERTFRIPQVVMTY-----EKLPEPKVSFTVRARMLGSTFREAVRDLEPHSETLTLRALEDALLLVGSSEMATVEIELSQSRGSLLDYEA---ESQDRAS--YSIEYFSEMLSAAQAADAVVVSFSEDAPVRVDMEYLGGGRLTFYVSPKIE 249
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA2_SULAC (DNA polymerase sliding clamp 2 OS=Sulfolobus acidocaldarius GN=pcn2 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.070e-12 Identity = 51/257 (19.84%), Postives = 119/257 (46.30%), Query Frame = 2 Query: 23 LELRLVQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASI-GDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIE-MHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIE 787 +++++V + + + + V++A GF ++ MD S V + + + + FE Y + + +G++L +V++++K +DI+ L+ + D + F + + + F + ++ D E+ + ++ F + + I GD++ + S GD+G + + L E ++E + L ++++ T+ S+T+ I+ S+LP+ + Y + + GY FY+AP+ E Sbjct: 1 MKVKVVDALGFSYIFKTLSQYVSEATLLFGNDGFKVKGMDPSKVVYIDIFVPKDYFEEYNLENEMKIGVSLKDVNEVIKNVSKEDILYLELE--KDKIMFTLDG---EYLRTFSLPVLSPDEVETPSINLEFPFRANILTSTFGDLLDEFDQIGGDSIRFKAQNGKLYLSVMGDMGESIVEL-------SLENGGLLESTGTDAESLYGLEHVSNTTKMRRPSDTLEIAFGSQLPLKLRYNLPKGGYADFYIAPRSE 245
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA2_PYRKO (DNA polymerase sliding clamp 2 OS=Pyrococcus kodakaraensis GN=pcn2 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.826e-12 Identity = 50/245 (20.41%), Postives = 108/245 (44.08%), Query Frame = 2 Query: 56 KKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEE 790 + ++ +++ ++A F + G ++A+D S V LV L L F Y + ++ +L K+LK A + D + L+ + F+ D+ F++ L+D ++ + IP + + + R K + D++ T E + F G+ VL T++ P + + + Y+ R+ ++ V I ++P++++Y + + G + F +AP++EE Sbjct: 14 ESLIATLEKFFDEAVFQVNMEGIQMRAIDPSRVVLVDLNLPEMLFSKYSVESEEAIAFDLKRFLKVLKLARSRDTLVLRKGGEN----FLEVGLLGDENTWFKLPLIDANTPEIEIPSLPWTVKAVVLAGALKRAVKAAKLVSDSIYFMATPEKLTFKAEGNDSEVRTVL----TMEDPGLLDLEHKMTKAKSAYGVAYLEDILRSLADADEVIIRFGFDIPLLLKYMVRDAGEVSFLIAPRVEE 250
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA_NANEQ (DNA polymerase sliding clamp OS=Nanoarchaeum equitans GN=pcn PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.184e-11 Identity = 49/247 (19.84%), Postives = 117/247 (47.37%), Query Frame = 2 Query: 53 LKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRC--DRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEG-VKFSTRGDIGTANIVLRQNTTVDKPEEATI-IEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPK 781 LKK++ + +L+++ F + G L AMD + +A+V ++ E F Y D+ I + ++++++ ++K +++ + D + + + + F + L++ + IP EY+ +V + S I D ++I D++ + G++ + L + E+A + I++ E ++++ Y+ F +A +S+ + L ++ P+ +EY+ + + F LAP+ Sbjct: 11 LKKIVPIVADLISEGQFVATEEGIKLVAMDPASIAMVIWEMKPEAFIDYTIEGDKEI-ITVSMDDLKTIVKKLKQREMVVWETDREKNKLKILARGTIKKT---FSIPLLEGEETETPIPSLEYNNVVELDSKAIKEIIDDASAIADSLKFKAEPPSKLIIKAEGEMKEMTVELTEG------EDAVVSIDIQEEAYASYSIDYLKKFAKAADVSDIAILKLKTDYPLWLEYRYLDKMTLIFILAPR 247
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA1_SULAC (DNA polymerase sliding clamp 1 OS=Sulfolobus acidocaldarius GN=pcn1 PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 3.444e-11 Identity = 54/251 (21.51%), Postives = 111/251 (44.22%), Query Frame = 2 Query: 53 LKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKI--ADFEMKLMDIDSEHLGIPEA-----EYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKI 784 LK ++E + + +++ F+ G L A+D +HV+L+ + L E F+ Y + G N ++K+L A + I++++D SP + KI ++ I++ + PE E+ + S F +++++ DTV I ++ V G G+ +N + +E + + Y++ T LS+ ++ S+E P+ +E+ + G + + LAPK+ Sbjct: 11 LKNIVETLTKFIDEGLFEIGQDGIRLVAVDKAHVSLINIELYKELFKEYEVEDEFKFGFNSQYLAKILSIAKRKEEISIESD-----------SPERVKITLGGALNRVFIINNIQVSPPEVPEVNLEFEVKASLSSKAFKTTINEISAVTDTVDIIAVEDKVILKGEGKEGSQ----IENEFSKDTGAISDMEFKNEAKSPYDVNYLSDILSLTNLSDYTRLAFSTEKPLELEFNMEGGGKVTYLLAPKL 246
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: YL823_MIMIV (Uncharacterized protein L823 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L823 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.672e-11 Identity = 60/270 (22.22%), Postives = 121/270 (44.81%), Query Frame = 2 Query: 14 AKMLELRLVQGSLLKKVLEAIKELVNDANFDCSATG----FSLQAMDSSHVALVALLLRSEGFEHYRCDRN-ISMGMNLNNVSKMLKCAGNDD------IITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAEMGYIRFYLAPKIEE 790 + +LE+ + +LKK+L I E+ ++ F + + + L+ L+L+ GF+ Y+C ++ I+ + L ++ + L G DD II++K D +T F+ E+ + ++ +P+ + + + + +F +IC+ + S+ D + IS+T + V FS R N+ R +V+ IE + F + M F + S+ ++I + + P+V+ G I + +P IEE Sbjct: 67 SNILEIVTTKIDVLKKILRLIGEVTSECQFSFQNVNEGGRIIVTELHDNKTILLKLVLKGTGFDFYKCSKSKITARLYLPDIDEALGLIGVDDTNTNPIIISMKKD--KETSIFITRIDNSGFTEQVELPCRESVGLNIPLPKTTFQGKIVINAEKFRKICERICSVSDLIKISLTDKEVSFSAR----YYNLDFRYKHSVESKVLGQTIENY------FFIDGMLKFIKYFQSSDEISIYIKKDFPLVIHGPFDNFGSIYVFTSP-IEE 323
BLAST of DY262934 vs. ExPASy Swiss-Prot
Match: PCNA_UNCMA (DNA polymerase sliding clamp OS=Uncultured methanogenic archaeon RC-I GN=pcn PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.672e-11 Identity = 54/255 (21.18%), Postives = 110/255 (43.14%), Query Frame = 2 Query: 38 VQGSLLKKVLEAIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDS--EHLGIPEAEYHAIVRMPSAEFARICKDLASIGDTVVISVTKEGVKFSTRGDIGTANIVLRQNTTVDKPEEATIIEMHEPVSLTFALRYMNSFTRATPLSNTVTISLSSELPVVVEYKIAE-MGYIRFYLAPKIEED 793 + + K +EA+ LV++A F + S +A+D ++VA+VA L ++ F+ + +G++L +L DD + L ++ + + + + L+D S + +P E + + AE R K + D + + V + GD+ + + ++ + ++ V F+L Y+N ++ + VTI L ++ PV + IA G + + LAP+IE + Sbjct: 6 INAEVFKDAIEAVSTLVDEAKFRITKDSISARAVDPANVAMVAFDLNAKAFDTFEATDG-EIGIDLVRFMDILGMTARDDRLELNLNEETRKLEIRTGGLA------YTLSLLDPGSIRKEPKVPALELPGKIVLNGAELKRAVKAAEKVSDHMALGVQDKTFYVEAEGDLDKVRLEIPESNLIS-------LQATSNVRSLFSLDYLNDIVKSLGKAEQVTIDLGTDYPVKFTFSIASGNGTVIYLLAPRIESE 246 The following BLAST results are available for this feature:
BLAST of DY262934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 77
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262934 ID=DY262934; Name=DY262934; organism=Citrus clementina; type=EST; length=1100bpback to top |