DY262936

Overview
NameDY262936
Unique NameDY262936
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1352
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262936 vs. ExPASy Swiss-Prot
Match: CAT1_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 2.020e-43
Identity = 112/304 (36.84%), Postives = 164/304 (53.95%), Query Frame = 1
Query:  148 GAPVWNNNSSMTIGPRGPILLEDYHPVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDM--VHALKPNPKSHI----QENWRIVDFFSHHPESLHMFSFLFDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPE*KLYIQIMDPDNEDKFDFDPLDVTKTWPEDILPLQPVGRVGFEQKHLKLPFQK 1041
            G  +     ++    RG  LL+D    E +  FDRER+PER VHARG  A G F    D SNLT A FL A G  TP + RFSTV   RGS +T RD  GFA +FY  EGNFD+VGNN PVFF+ D +  P +  +HA KPNP+ H+    Q+  RI D  +   +SL   S +  + G P+ Y + E +   ++ L+   GK      HW+P  G   L  +EA +       +  ++L++SI      + +L IQ M  +N+ +  F+  +VTK+    ++PL   G++ F  K++++ F +
Sbjct:   21 GVALGKTYGTLGAASRGATLLQDLLFTEIIFAFDRERVPERAVHARGTGAHGTFLSYEDWSNLTAASFLSAEGKFTPEMTRFSTVSGARGSADTARDVHGFATRFYVDEGNFDIVGNNIPVFFIWDVIIEPTLMALHAQKPNPRFHLPRGQQDPNRISDNLTARGDSLAQGSQISSERGSPKAYSNTEPNKHRSFRLVTDNGKQFQCSNHWQPLQGFIDLGVEEAWRFPEEGEGYVAENLFESIELLTVGDEELEIQSMSFNNDLRERFNSSEVTKSSVVRLVPLITQGKLVF-NKNIQMLFNE 323          
BLAST of DY262936 vs. ExPASy Swiss-Prot
Match: CATA_PENJA (Catalase OS=Penicillium janthinellum PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 6.993e-20
Identity = 86/281 (30.60%), Postives = 125/281 (44.48%), Query Frame = 1
Query:  166 NNSSMTIGPRGPILLEDYHPVEKLANFDRERIPERVVHARGASAKGFFEVTHDVSNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNFDLVGNNFPVFFVRDGMKFPDMVHALKPNPKSHIQ----ENWRIVDFFSHHPESLHMFSFL-FDDVGVPRDYRHMEGSGVNTYMLINKAGKAHYVKFHWKPTCGVKCLLEDEAIKVGGANHSHATQDLYDSIAAGNYPE*KLYIQIMDPDNEDKFDFDPLD---VTKTWPEDILPL 984
            + SS+T G  G +LL+D    +++  FDR    ER  HA  A+A G F    D +    A F +A G Q   +  FSTV   +GS  T+RD   FA KF +     +LVGNN P+ F    + F  ++ A K    +               F   P SLH  SF           +RHM G G +T+ L+ K G  +  KF +K   G    +  +A +V   +  +     + + AAG YP  +L  Q+M       F+ DP +    TK  P + +PL
Sbjct:   24 SESSLTDGDAGALLLQDISEWDEVFRFDRLEAVERAAHAAAAAAFGAFVARGDWTASAAAAF-QAAGKQIAFMAAFSTVAGAKGSA-TVRDADAFAAKFASAAALQELVGNNSPISFFIFDLLFAAILFASKAKAANQAAFAAAAELAAESLFVRLP-SLHQVSFFALAGFAAVAAHRHMNGYGSHTFKLVAKDGSVYCSKFWYKADQGQAAEVWKDAEEVAAEDVDYFRDLNFQAEAAGRYPLWELASQVM---TFSDFEIDPFNENIPTKVVPRESVPL 298          
The following BLAST results are available for this feature:
BLAST of DY262936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 142
Match NameE-valueIdentityDescription
CAT1_PENJA2.020e-4336.84Catalase OS=Penicillium janthinellum PE=1 SV=1[more]
CATA_PENJA6.993e-2030.60Catalase OS=Penicillium janthinellum PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BE05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262936 ID=DY262936; Name=DY262936; organism=Citrus clementina; type=EST; length=1352bp
CACAATCCCCATTTGTCTACTCTCTCTTTTTCTTTCTCGTAGTGTAGCTT
CTCGTTCAATCTTTTTTTCTGCTTCCCTCCCGCTATGGATCCATACAAGT
TCCGCCCTGCCAGTTCTTTCAACGCCCCCTTCTTTACCACCAATTCCGGC
GCTCCGGTATGGAACAACAACTCATCAATGACGATTGGACCTAGAGGTCC
AATCCTCCTTGAGGATTATCATCCAGTGGAGAAACTTGCAAATTTTGATA
GGGAGCGGATTCCAGAACGTGTTGTCCATGCCAGGGGAGCCAGTGCTAAG
GGTTTCTTTGAGGTCACCCATGATGTTTCTAACCTTACTTGTGCTGATTT
CCTTCGAGCCCCAGGGGTTCAGACGCCTGTCATTGTCCGCTTCTCCACTG
TTATCCATGAGCGTGGCAGCCCTGAAACCCTGAGAGATCCTCGAGGATTT
GCGGTCAAGTTTTACACCAGAGAGGGTAATTTTGATCTTGTGGGAAACAA
TTTCCCCGTCTTTTTTGTCCGTGATGGAATGAAATTCCCTGACATGGTCC
ATGCGCTTAAACCTAACCCAAAGTCTCACATCCAAGAGAACTGGAGGATT
GTTGACTTCTTCTCCCATCATCCTGAAAGCTTGCACATGTTCTCCTTCTT
GTTTGATGATGTGGGTGTCCCACGAGATTACAGGCACATGGAAGGATCTG
GTGTTAACACTTACATGCTGATCAATAAGGCTGGGAAAGCACATTATGTG
AAATTTCATTGGAAACCCACTTGTGGGGTTAAGTGTTTATTGGAAGATGA
AGCAATCAAGGTTGGAGGAGCCAACCACAGCCATGCTACTCAAGATCTTT
ATGACTCAATTGCAGCTGGAAACTATCCTGAGTGAAAACTCTACATCCAG
ATTATGGATCCCGACAATGAGGACAAATTTGACTTTGACCCACTTGATGT
AACCAAAACCTGGCCTGAGGACATCTTGCCCTTGCAACCTGTGGGCCGGG
TTGGTTTTGAACAAAAACATTTAAAACTTCCTTTTCAAAAAAAGAAAAGC
TTGGCTTCCTGTCCCTGCAATTGGGGGTCCCTGGCACCTATAATTCAAAA
GAATAGTTTGCTCCAAAATCCAAATCTTCTCCTAGGCTGAAAACTCAAAA
AGCCACCCTCTAAGGGGGCAAAAATTTTTTTAACCCCCCCAAAAAAAGGA
CCCAAAAAGGGGGTCCAACAAAAAAAAACAATTTTAAAGAGGGGTTTTTT
TTAAAATTTTATAGCCCAAAGGGGGGGAAGAAAGAAAAAAAATAAAATAT
ATTTCCCTCTCTTTAAGGAGGTATGAATATATTCCGGGTCCTGTGCCCTG
TA
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