DY262941

Overview
NameDY262941
Unique NameDY262941
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1336
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: CLK1_MOUSE (Dual specificity protein kinase CLK1 OS=Mus musculus GN=Clk1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 4.584e-32
Identity = 71/150 (47.33%), Postives = 95/150 (63.33%), Query Frame = 3
Query:  525 KVATVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLLHIC*RE*TDMPKNMVE 974
            K    +H   + HTDLKPEN+L V S+Y       + ++ PK     +R   +  IKV+DFGS TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHLAMMER+LGPL           PK+M++
Sbjct:  273 KSVNFLHSNKLTHTDLKPENILFVKSDY-------TEAYNPK-MKRDERTIVNPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSREHLAMMERILGPL-----------PKHMIQ 403          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: CLK1_HUMAN (Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 7.819e-32
Identity = 71/150 (47.33%), Postives = 95/150 (63.33%), Query Frame = 3
Query:  525 KVATVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLLHIC*RE*TDMPKNMVE 974
            K    +H   + HTDLKPEN+L V S+Y       + ++ PK     +R   +  IKV+DFGS TY+    + +VSTRHYRAPEVIL LGW+ PCD+WS+GCIL+E   G  +F TH++ EHLAMMER+LGPL           PK+M++
Sbjct:  274 KSVNFLHSNKLTHTDLKPENILFVQSDY-------TEAYNPKIKRD-ERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL-----------PKHMIQ 404          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: CLKA_DICDI (Probable serine/threonine-protein kinase clkA OS=Dictyostelium discoideum GN=clkA PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.880e-31
Identity = 68/134 (50.75%), Postives = 91/134 (67.91%), Query Frame = 3
Query:  540 MHDLCMIHTDLKPENVLLVSSEYI----KVP-DYKSSSHTPKDSS--YFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP 920
            MH L ++HTDLKPEN+LL SS +      +P  +K+S  T  ++S  ++  +  +  + VIDFG  T+E      IV +R YR PE+ILG+GW+YPCDIW VGCILVEL  G  LF TH N++HLAMME+V+GP
Sbjct:  710 MHKLSLVHTDLKPENILLESSRFTYFDNSIPLQFKNSIDTTSNNSVDHYCHLVDTDIV-VIDFGGATFENTHHTAIVCSRPYRPPEIILGMGWSYPCDIWGVGCILVELYLGYTLFDTHNNVQHLAMMEKVMGP 842          

HSP 2 Score: 79.337 bits (194), Expect = 5.647e-14
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 2
Query:  302 DDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGNRY 541
            DD++ +Y   +GE L +RYK+   +G GTF  V+ECWD      VAIKIVR  KKY E A++EI++L+ L K      +Y
Sbjct:  572 DDENDYYKVQVGEYLNNRYKVLCTVGSGTFSTVVECWDTNSSGQVAIKIVRSAKKYTEDALVEIDILRNLEKTGNSNGKY 651          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: CLK3_RAT (Dual specificity protein kinase CLK3 OS=Rattus norvegicus GN=Clk3 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 6.619e-31
Identity = 64/128 (50.00%), Postives = 86/128 (67.19%), Query Frame = 3
Query:  540 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 923
            +H+  + HTDLKPEN+L V+SE+  + +   S          ++  K+++I+V DFGS T++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME++LGP+
Sbjct:  274 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCE--------EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 393          

HSP 2 Score: 83.5741 bits (205), Expect = 2.994e-15
Identity = 40/77 (51.95%), Postives = 56/77 (72.73%), Query Frame = 2
Query:  299 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 526
            EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK
Sbjct:  137 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 213          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: CLK3_MOUSE (Dual specificity protein kinase CLK3 OS=Mus musculus GN=Clk3 PE=1 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 6.619e-31
Identity = 64/128 (50.00%), Postives = 86/128 (67.19%), Query Frame = 3
Query:  540 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 923
            +H+  + HTDLKPEN+L V+SE+  + +   S          ++  K+++I+V DFGS T++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME++LGP+
Sbjct:  422 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCE--------EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 541          

HSP 2 Score: 83.5741 bits (205), Expect = 2.994e-15
Identity = 40/77 (51.95%), Postives = 56/77 (72.73%), Query Frame = 2
Query:  299 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 526
            EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK
Sbjct:  285 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 361          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: CLK3_HUMAN (Dual specificity protein kinase CLK3 OS=Homo sapiens GN=CLK3 PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 6.619e-31
Identity = 64/128 (50.00%), Postives = 86/128 (67.19%), Query Frame = 3
Query:  540 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 923
            +H+  + HTDLKPEN+L V+SE+  + +   S          ++  K+++I+V DFGS T++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME++LGP+
Sbjct:  422 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCE--------EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 541          

HSP 2 Score: 83.5741 bits (205), Expect = 2.994e-15
Identity = 40/77 (51.95%), Postives = 56/77 (72.73%), Query Frame = 2
Query:  299 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 526
            EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK
Sbjct:  285 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 361          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: CLK3_BOVIN (Dual specificity protein kinase CLK3 OS=Bos taurus GN=CLK3 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 6.619e-31
Identity = 64/128 (50.00%), Postives = 86/128 (67.19%), Query Frame = 3
Query:  540 MHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 923
            +H+  + HTDLKPEN+L V+SE+  + +   S          ++  K+++I+V DFGS T++      IV+TRHYR PEVIL LGW  PCD+WS+GCIL E   G  LFQTHEN EHL MME++LGP+
Sbjct:  274 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCE--------EKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI 393          

HSP 2 Score: 83.5741 bits (205), Expect = 2.994e-15
Identity = 40/77 (51.95%), Postives = 56/77 (72.73%), Query Frame = 2
Query:  299 EDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRER-KEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDK 526
            EDDK+GH +  +G+ L  RY+I   +GEGTFG+V+EC D  R K  VA+KI+R + KYREAA +EI VL+++ + DK
Sbjct:  137 EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDK 213          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: POM1_SCHPO (Dual specificity protein kinase pom1 OS=Schizosaccharomyces pombe GN=pom1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.870e-17
Identity = 50/139 (35.97%), Postives = 73/139 (52.52%), Query Frame = 3
Query:  513 QNMIKVATVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLLH 929
            + +I+  T++++  +IH DLKPEN+LL                           P  S +KVIDFGS+ +E       + +R YR+PEVILG+G+  P D+WS+GCI+ E+ TG  LF      E LA +  + GP  H
Sbjct:  807 RQLIQCLTLLNEKHVIHCDLKPENILLCH-------------------------PFKSQVKVIDFGSSCFEGECVYTYIQSRFYRSPEVILGMGYGTPIDVWSLGCIIAEMYTGFPLFPGENEQEQLACIMEIFGPPDH 920          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: DYRK3_RAT (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Rattus norvegicus GN=Dyrk3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.067e-16
Identity = 51/135 (37.78%), Postives = 70/135 (51.85%), Query Frame = 3
Query:  513 QNMIKVATVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 917
            Q++++    +H   +IH DLKPEN+LL                         +    SA KVIDFGS+ +E       + +R YRAPE+ILG  ++ P DIWS GCIL EL TG+ LF   +  + LA M  +LG
Sbjct:  316 QSILQSLDALHKNKIIHCDLKPENILL-------------------------KHHGRSATKVIDFGSSCFEYQKLYTYIQSRFYRAPEIILGCRYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACMMELLG 425          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: DYRK3_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 3 OS=Mus musculus GN=Dyrk3 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.700e-16
Identity = 51/135 (37.78%), Postives = 70/135 (51.85%), Query Frame = 3
Query:  513 QNMIKVATVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 917
            Q++++    +H   +IH DLKPEN+LL                         +    SA KVIDFGS+ +E       + +R YRAPE+ILG  ++ P DIWS GCIL EL TG+ LF   +  + LA M  +LG
Sbjct:  316 QSILQSLDALHKNKIIHCDLKPENILL-------------------------KHHGRSATKVIDFGSSCFEYQKLYTYIQSRFYRAPEIILGCRYSTPIDIWSFGCILAELLTGQPLFPGEDEGDQLACMIELLG 425          
The following BLAST results are available for this feature:
BLAST of DY262941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
CLK1_MOUSE4.584e-3247.33Dual specificity protein kinase CLK1 OS=Mus muscul... [more]
CLK1_HUMAN7.819e-3247.33Dual specificity protein kinase CLK1 OS=Homo sapie... [more]
CLKA_DICDI3.880e-3150.75Probable serine/threonine-protein kinase clkA OS=D... [more]
CLK3_RAT6.619e-3150.00Dual specificity protein kinase CLK3 OS=Rattus nor... [more]
CLK3_MOUSE6.619e-3150.00Dual specificity protein kinase CLK3 OS=Mus muscul... [more]
CLK3_HUMAN6.619e-3150.00Dual specificity protein kinase CLK3 OS=Homo sapie... [more]
CLK3_BOVIN6.619e-3150.00Dual specificity protein kinase CLK3 OS=Bos taurus... [more]
POM1_SCHPO1.870e-1735.97Dual specificity protein kinase pom1 OS=Schizosacc... [more]
DYRK3_RAT2.067e-1637.78Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK3_MOUSE2.700e-1637.78Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10BE10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262941 ID=DY262941; Name=DY262941; organism=Citrus clementina; type=EST; length=1336bp
TTCGTTTCAATCGCATCAAGATCTCGATCTCTCTCTTATTTCCTCGCCGT
GAGCTGCGATCATGGAGATGGAGCGCGTGACGGAGTTTCCTTTTTCGAAT
CTGGATCGGCGTCCTCGTAAGCGAGCGCGTTTGGGCTGGGACGTGCCTCA
GGTACCGAAGGCTCAGGTAGGATTATTTTGTGGACAAGAGGTTGGGAATG
TAACAAGCTTTGCACCTCCAAGAGCTCCCTCAGACCATGTCACTAGTTCT
TCTCTATTTGTAAAGGGAGTGGCTCGAAATGGTTCTCCCCCATGGCGTGA
GGATGACAAAGATGGCCATTATATGTTTGCGCTTGGAGAAAATTTAACTT
CTCGCTATAAGATTCACAGCAAAATGGGTGAAGGAACCTTCGGTCAGGTT
TTGGAATGCTGGGATCGTGAGAGGAAAGAAATGGTAGCCATTAAAATTGT
TCGTGGGATCAAGAAATATCGTGAGGCTGCTATGATAGAAATTGAAGTAC
TTCAACAACTTGCAAAACATGATAAAGGTGGCAACCGTTATGCATGATCT
GTGTATGATACATACTGACTTAAAGCCTGAGAATGTTCTACTTGTTTCTT
CCGAGTATATTAAGGTTCCTGACTACAAGAGTTCTTCGCACACACCAAAA
GATTCTTCCTACTTTAAAAGAATGCCAAAGTCAAGTGCTATTAAGGTGAT
TGATTTTGGCAGCACAACTTATGAGCGCCCAGATCAGAACTACATTGTAT
CCACCCGACATTATCGTGCGCCGGAGGTTATCCTTGGACTTGGGTGGACT
TACCCATGTGATATATGGAGTGTTGGTTGTATCTTAGTGGAGTTATGCAC
GGGTGAGGCATTATTCCAAACTCATGAGAACTTGGAACACCTTGCGATGA
TGGAACGGGTGCTTGGTCCCTTGCTTCACATATGCTGAAGAGAGTAGACC
GACATGCCGAAGAATATGGTAGAAGGGGGGGGTAGGTTGGGACTGGGCCG
AAGGGGGCACCCTCAAGGGAAAGTAATAAAATCTGTGATGAAGCTACCCC
GTCCTTCAAAACCTAAAAATGCCGCCCCGGTGACCATTTTCCCTGGGGGA
TTTTTCCCCTTTTATTTGGAAGGGCAGTGGTTAGGGTTAGATCCATCGGG
AAAGGGCTAAATGGGGCGGGGGAAACCCCTTTAGGGACTCCCCTTTTTTT
TAACAAAAAAAATCATCTCTTAAGGAAAAAAAGGGGAACCCCCAATTATT
TTTGTTTTCACCAAAACATTTTTTCCCGGGTGGTGTGCCAAATAAGGGGC
GGGGGGTGTTGGTAAGAAAAACCCCAAAAAGAAAAT
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