DY262941

Overview
NameDY262941
Unique NameDY262941
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1336
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: DYR1A_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Mus musculus GN=Dyrk1a PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.985e-15
Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = 3
Query:  546 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG-PLLHI 932
            +L +IH DLKPEN+LL +                         PK SAIK++DFGS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++ +  +  VLG P  HI
Sbjct:  280 ELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI 384          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: DYR1A_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 1A OS=Homo sapiens GN=DYRK1A PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.985e-15
Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = 3
Query:  546 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG-PLLHI 932
            +L +IH DLKPEN+LL +                         PK SAIK++DFGS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++ +  +  VLG P  HI
Sbjct:  280 ELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHI 384          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: DYR1B_MOUSE (Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Mus musculus GN=Dyrk1b PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 5.092e-15
Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = 3
Query:  546 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 917
            +L +IH DLKPEN+LL +                         PK SAIK++DFGS+          + +R YR+PEV+LG  +    D+WS+GCILVE+ TGE LF     ++ ++ +  VLG
Sbjct:  232 ELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGTPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMSRIVEVLG 330          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: YAK1_ENCCU (Probable dual specificity protein kinase YAK1 homolog OS=Encephalitozoon cuniculi GN=YAK1 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.650e-15
Identity = 47/138 (34.06%), Postives = 70/138 (50.72%), Query Frame = 3
Query:  510 LQNMIKVATVMHDLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPL 923
            L+ M++++     L +IH DLKPEN+L+   +  K                         IK+IDFGS        ++ V +R+YRAPEVILG+ +   CDIWS+GCI  EL  G  LF   +N++ +  +  + G L
Sbjct:  148 LEGMVQLSL----LGIIHCDLKPENILIADYDTFK-------------------------IKIIDFGSAVTSPQGSHFYVQSRYYRAPEVILGIPYGSSCDIWSLGCIGYELYVGHPLFPGKDNMDQIGRIHGLFGSL 256          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: MNB_DROME (Serine/threonine-protein kinase minibrain OS=Drosophila melanogaster GN=mnb PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 6.650e-15
Identity = 46/124 (37.10%), Postives = 67/124 (54.03%), Query Frame = 3
Query:  546 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 917
            +L +IH DLKPEN+LL +                         PK SAIK++DFGS+        + + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++ +  +  VLG
Sbjct:  285 ELNIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSSCQLGQRIYHYIQSRFYRSPEVLLGIQYDLAIDMWSLGCILVEMHTGEPLFSGCNEVDQMNKIVEVLG 383          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: DYRK1_DICDI (Probable serine/threonine-protein kinase dyrk1 OS=Dictyostelium discoideum GN=dyrk1 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.685e-15
Identity = 45/120 (37.50%), Postives = 63/120 (52.50%), Query Frame = 3
Query:  555 MIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVL 914
            +IH DLKPEN+LL                         R PK SAIK+IDFGS+ +        + +R YR+PE++L L +++  D+WS+GCILVE+  GE LF      + L  +  VL
Sbjct:  428 VIHCDLKPENILL-------------------------RNPKRSAIKIIDFGSSCHSNERMYKYIQSRFYRSPEILLELEYSFSIDMWSLGCILVEMHVGEPLFSGQNEQDQLTKIIEVL 522          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: DYR1B_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 1B OS=Homo sapiens GN=DYRK1B PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.134e-14
Identity = 46/124 (37.10%), Postives = 65/124 (52.42%), Query Frame = 3
Query:  546 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 917
            +L +IH DLKPEN+LL +                         PK SAIK++DFGS+          + +R YR+PEV+LG  +    D+WS+GCILVE+ TGE LF     ++ +  +  VLG
Sbjct:  232 ELSIIHCDLKPENILLCN-------------------------PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGTPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNRIVEVLG 330          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: MBK1_CAEEL (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis elegans GN=mbk-1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.481e-14
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 3
Query:  546 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 917
            +L +IH DLKPENVLLV++                         K S I+VIDFGS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++ +  +  VLG
Sbjct:  449 ELSIIHCDLKPENVLLVNA-------------------------KRSQIRVIDFGSSCQTGHRIYQYIQSRFYRSPEVLLGIAYDTKIDMWSLGCILVEMHTGEPLFAGSSEVDQMMKIVEVLG 547          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: MBK1_CAEBR (Dual specificity tyrosine-phosphorylation-regulated kinase mbk-1 OS=Caenorhabditis briggsae GN=mbk-1 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.481e-14
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 3
Query:  546 DLCMIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLG 917
            +L +IH DLKPENVLLV++                         K S I+VIDFGS+          + +R YR+PEV+LG+ +    D+WS+GCILVE+ TGE LF     ++ +  +  VLG
Sbjct:  488 ELSIIHCDLKPENVLLVNA-------------------------KRSQIRVIDFGSSCQTGHRIYQYIQSRFYRSPEVLLGIAYDTKIDMWSLGCILVEMHTGEPLFAGSSEVDQMMKIVEVLG 586          
BLAST of DY262941 vs. ExPASy Swiss-Prot
Match: PPK5_SCHPO (Serine/threonine-protein kinase ppk5 OS=Schizosaccharomyces pombe GN=ppk5 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.310e-14
Identity = 50/122 (40.98%), Postives = 61/122 (50.00%), Query Frame = 3
Query:  555 MIHTDLKPENVLLVSSEYIKVPDYKSSSHTPKDSSYFKRMPKSSAIKVIDFGSTTYERPDQNYIVSTRHYRAPEVILGLGWTYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGP 920
            +IH DLKPEN+LL              SH           P  + IK+IDFGS+ +        + +R YRAPE+ILGL +    DIWS GCIL EL TG  LF      E L  +  VLGP
Sbjct:  640 IIHCDLKPENLLL--------------SH-----------PLKARIKLIDFGSSCFYNEKVYTYLQSRFYRAPEIILGLEYGKEIDIWSFGCILAELFTGVPLFPGGNETEQLGYIMEVLGP 736          
The following BLAST results are available for this feature:
BLAST of DY262941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
DYR1A_MOUSE2.985e-1537.69Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1A_HUMAN2.985e-1537.69Dual specificity tyrosine-phosphorylation-regulate... [more]
DYR1B_MOUSE5.092e-1537.10Dual specificity tyrosine-phosphorylation-regulate... [more]
YAK1_ENCCU6.650e-1534.06Probable dual specificity protein kinase YAK1 homo... [more]
MNB_DROME6.650e-1537.10Serine/threonine-protein kinase minibrain OS=Droso... [more]
DYRK1_DICDI8.685e-1537.50Probable serine/threonine-protein kinase dyrk1 OS=... [more]
DYR1B_HUMAN1.134e-1437.10Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK1_CAEEL1.481e-1437.90Dual specificity tyrosine-phosphorylation-regulate... [more]
MBK1_CAEBR1.481e-1437.90Dual specificity tyrosine-phosphorylation-regulate... [more]
PPK5_SCHPO4.310e-1440.98Serine/threonine-protein kinase ppk5 OS=Schizosacc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionIC0AAA10BE10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262941 ID=DY262941; Name=DY262941; organism=Citrus clementina; type=EST; length=1336bp
TTCGTTTCAATCGCATCAAGATCTCGATCTCTCTCTTATTTCCTCGCCGT
GAGCTGCGATCATGGAGATGGAGCGCGTGACGGAGTTTCCTTTTTCGAAT
CTGGATCGGCGTCCTCGTAAGCGAGCGCGTTTGGGCTGGGACGTGCCTCA
GGTACCGAAGGCTCAGGTAGGATTATTTTGTGGACAAGAGGTTGGGAATG
TAACAAGCTTTGCACCTCCAAGAGCTCCCTCAGACCATGTCACTAGTTCT
TCTCTATTTGTAAAGGGAGTGGCTCGAAATGGTTCTCCCCCATGGCGTGA
GGATGACAAAGATGGCCATTATATGTTTGCGCTTGGAGAAAATTTAACTT
CTCGCTATAAGATTCACAGCAAAATGGGTGAAGGAACCTTCGGTCAGGTT
TTGGAATGCTGGGATCGTGAGAGGAAAGAAATGGTAGCCATTAAAATTGT
TCGTGGGATCAAGAAATATCGTGAGGCTGCTATGATAGAAATTGAAGTAC
TTCAACAACTTGCAAAACATGATAAAGGTGGCAACCGTTATGCATGATCT
GTGTATGATACATACTGACTTAAAGCCTGAGAATGTTCTACTTGTTTCTT
CCGAGTATATTAAGGTTCCTGACTACAAGAGTTCTTCGCACACACCAAAA
GATTCTTCCTACTTTAAAAGAATGCCAAAGTCAAGTGCTATTAAGGTGAT
TGATTTTGGCAGCACAACTTATGAGCGCCCAGATCAGAACTACATTGTAT
CCACCCGACATTATCGTGCGCCGGAGGTTATCCTTGGACTTGGGTGGACT
TACCCATGTGATATATGGAGTGTTGGTTGTATCTTAGTGGAGTTATGCAC
GGGTGAGGCATTATTCCAAACTCATGAGAACTTGGAACACCTTGCGATGA
TGGAACGGGTGCTTGGTCCCTTGCTTCACATATGCTGAAGAGAGTAGACC
GACATGCCGAAGAATATGGTAGAAGGGGGGGGTAGGTTGGGACTGGGCCG
AAGGGGGCACCCTCAAGGGAAAGTAATAAAATCTGTGATGAAGCTACCCC
GTCCTTCAAAACCTAAAAATGCCGCCCCGGTGACCATTTTCCCTGGGGGA
TTTTTCCCCTTTTATTTGGAAGGGCAGTGGTTAGGGTTAGATCCATCGGG
AAAGGGCTAAATGGGGCGGGGGAAACCCCTTTAGGGACTCCCCTTTTTTT
TAACAAAAAAAATCATCTCTTAAGGAAAAAAAGGGGAACCCCCAATTATT
TTTGTTTTCACCAAAACATTTTTTCCCGGGTGGTGTGCCAAATAAGGGGC
GGGGGGTGTTGGTAAGAAAAACCCCAAAAAGAAAAT
back to top