DY262980

Overview
NameDY262980
Unique NameDY262980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1175
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.276e-16
Identity = 50/115 (43.48%), Postives = 69/115 (60.00%), Query Frame = 3
Query:  447 MGNSESS----STDEESCKKPREE-HIKAKISRVHYR-TEPS---DTTSLV--VKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLP 758
            +GN+E+S      DE   K+   E  +   ++  H   TEP     TTS V  + DGY+WRKYGQKV + NP PR+Y+KC+  P C V+K V+R+  D   +V TYEG+HNH +P
Sbjct:  361 VGNAETSVGERHEDEPDPKRRNTEVRVSEPVASSHRTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCT-TPDCGVRKHVERAATDPKAVVTTYEGKHNHDVP 474          

HSP 2 Score: 80.8777 bits (198), Expect = 1.631e-14
Identity = 44/110 (40.00%), Postives = 69/110 (62.73%), Query Frame = 3
Query:  456 SESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGS 785
            S+  ++ +E+ +  RE    ++IS   +R++P +       DGY WRKYGQK  + +  PR+Y+KC+  P+CPVKKKV+RS++ Q V    Y+G+HNH LP +    +GS
Sbjct:  214 SQIRASVQETSQGQRET---SEISVFEHRSQPQNADK-PADDGYNWRKYGQKQVKGSDFPRSYYKCTH-PACPVKKKVERSLDGQ-VTEIIYKGQHNHELPQKRGNNNGS 317          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.973e-16
Identity = 50/136 (36.76%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  453 NSESSSTDEESCKKPREEHIKAKIS---RVHYRTEPSDTTS-----LVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTSRCVTAGSVPCSTGQT 836
            N+ SS +  +    PR   IK + S   +V     P+   S     +V  D + WRKYGQK  + +P PR Y++CS +  C  +K+V+RS  D ++LV TY  EHNHP P Q +A +GST    ++   P S   T
Sbjct:  166 NNTSSCSQVQISSSPRNLGIKRRKSQAKKVVCIPAPAAMNSRSSGEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPTQRNALAGSTRSSSSSSLNPSSKSST 301          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK21_ARATH (Probable WRKY transcription factor 21 OS=Arabidopsis thaliana GN=WRKY21 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.973e-16
Identity = 42/106 (39.62%), Postives = 60/106 (56.60%), Query Frame = 3
Query:  450 GNSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHP-LPCQ 764
            G+ +  S+    C K R+  ++  I       + +D    +  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R +ED ++L+ TYE EHNHP LP Q
Sbjct:  275 GSLKCGSSSRCHCAKKRKHRVRRSIRVPAISNKVAD----IPPDDYSWRKYGQKPIKGSPYPRGYYKCSSMRGCPARKHVERCLEDPAMLIVTYEAEHNHPKLPSQ 376          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK74_ARATH (Probable WRKY transcription factor 74 OS=Arabidopsis thaliana GN=WRKY74 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 3.883e-16
Identity = 41/100 (41.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  450 GNSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNH 749
            G+ +  S  +  C K R+  +K  I       + +D    +  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R VE+ S+L+ TYEGEHNH
Sbjct:  224 GSLKCGSKSKCHCSKKRKLRVKRSIKVPAISNKIAD----IPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCVEETSMLIVTYEGEHNH 319          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.883e-16
Identity = 36/83 (43.37%), Postives = 54/83 (65.06%), Query Frame = 3
Query:  570 VVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTSRCVTAGSVP 818
            ++ DGY+WRKYGQKV + NP+PR+Y+KC+    CPV+K V+R+  D   ++ TYEG+HNH +P    +   +      + SVP
Sbjct:  360 ILDDGYRWRKYGQKVVKGNPNPRSYYKCT-TIGCPVRKHVERASHDMRAVITTYEGKHNHDVPAARGSGYATNRAPQDSSSVP 441          

HSP 2 Score: 82.8037 bits (203), Expect = 4.293e-15
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 3
Query:  444 TMGNSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTS 791
            T  NS    + E+  K   E+  + +    +     +       +DGY WRKYGQK  + + +PR+Y+KC+F P+CP KKKV+RS+E Q +    Y+G HNHP P     +S S+S
Sbjct:  140 TTTNSSIFQSQEQQKKNQSEQWSQTETRPNNQAVSYNGREQRKGEDGYNWRKYGQKQVKGSENPRSYYKCTF-PNCPTKKKVERSLEGQ-ITEIVYKGSHNHPKPQSTRRSSSSSS 253          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 3.883e-16
Identity = 45/104 (43.27%), Postives = 67/104 (64.42%), Query Frame = 3
Query:  450 GNSESSSTDEESCKK-PREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLP 758
            G+ +    DE   K+  REE++K    RV  +T  SD    ++ DGY+WRKYGQKV + NP+PR+Y+KC+F   C V+K V+R+ +D   ++ TYEG+H H +P
Sbjct:  196 GDGKDIGEDETEAKRWKREENVKEP--RVVVQTT-SDID--ILDDGYRWRKYGQKVVKGNPNPRSYYKCTFT-GCFVRKHVERAFQDPKSVITTYEGKHKHQIP 293          

HSP 2 Score: 73.9442 bits (180), Expect = 1.994e-12
Identity = 34/71 (47.89%), Postives = 47/71 (66.20%), Query Frame = 3
Query:  579 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTS 791
            DGY WRKYGQK  + + +PR+YFKC++ P+C  KKKV+ S+    ++   Y+G HNHP P Q    S ST+
Sbjct:  118 DGYNWRKYGQKQVKGSENPRSYFKCTY-PNCLTKKKVETSLVKGQMIEIVYKGSHNHPKP-QSTKRSSSTA 186          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK20_ARATH (Probable WRKY transcription factor 20 OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.071e-16
Identity = 34/70 (48.57%), Postives = 52/70 (74.29%), Query Frame = 3
Query:  570 VVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAAS 779
            ++ DGY+WRKYGQKV R NP+PR+Y+KC+ A  CPV+K V+R+  D   ++ TYEG+H+H +P    +++
Sbjct:  379 ILDDGYRWRKYGQKVVRGNPNPRSYYKCT-AHGCPVRKHVERASHDPKAVITTYEGKHDHDVPTSKSSSN 447          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK15_ARATH (Probable WRKY transcription factor 15 OS=Arabidopsis thaliana GN=WRKY15 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 5.071e-16
Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 3
Query:  441 LTMGNSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPL 755
            LT   + +SS+    C K R    K K  R+      S   S V  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R+ +D S+L+ TYEG+HNH L
Sbjct:  199 LTGKCASASSSGRCHCSKKR----KIKQRRIIRVPAISAKMSDVPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAADDSSMLIVTYEGDHNHSL 299          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK24_ARATH (Probable WRKY transcription factor 24 OS=Arabidopsis thaliana GN=WRKY24 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.623e-16
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 3
Query:  492 KPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHP 752
            K  +E    K+ R+ + T   D    V+ DGY+WRKYGQK  + N  PR+Y++C++  +C VKK+VQR  +D +V+V TYEG HNHP
Sbjct:   73 KELKEKRSRKVPRIAFHTRSDDD---VLDDGYRWRKYGQKSVKHNAHPRSYYRCTY-HTCNVKKQVQRLAKDPNVVVTTYEGVHNHP 155          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK23_ARATH (Probable WRKY transcription factor 23 OS=Arabidopsis thaliana GN=WRKY23 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 6.623e-16
Identity = 54/142 (38.03%), Postives = 80/142 (56.34%), Query Frame = 3
Query:  444 TMGNSESSSTDEESCKKPREEHIKAKIS--------RVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTSRCVTAGSVPCSTGQTITL 845
            T  N E    D++  K   ++ +KAK +        RV + T+ S+   L  +DGY+WRKYGQK  +++P PR+Y++C+ A SC VKK+V+RS  D S +V TYEG+H H  P         TSR ++ G    S+G   +L
Sbjct:  126 TEDNEEEGGEDQQE-KSHTKKQLKAKKNNQKRQREARVAFMTK-SEVDHL--EDGYRWRKYGQKAVKNSPFPRSYYRCTTA-SCNVKKRVERSFRDPSTVVTTYEGQHTHISPL--------TSRPISTGGFFGSSGAASSL 254          
The following BLAST results are available for this feature:
BLAST of DY262980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
WRKY3_ARATH2.276e-1643.48Probable WRKY transcription factor 3 OS=Arabidopsi... [more]
WRK35_ARATH2.973e-1636.76Probable WRKY transcription factor 35 OS=Arabidops... [more]
WRK21_ARATH2.973e-1639.62Probable WRKY transcription factor 21 OS=Arabidops... [more]
WRK74_ARATH3.883e-1641.00Probable WRKY transcription factor 74 OS=Arabidops... [more]
WRK33_ARATH3.883e-1643.37Probable WRKY transcription factor 33 OS=Arabidops... [more]
WRK26_ARATH3.883e-1643.27Probable WRKY transcription factor 26 OS=Arabidops... [more]
WRK20_ARATH5.071e-1648.57Probable WRKY transcription factor 20 OS=Arabidops... [more]
WRK15_ARATH5.071e-1642.86Probable WRKY transcription factor 15 OS=Arabidops... [more]
WRK24_ARATH6.623e-1645.98Probable WRKY transcription factor 24 OS=Arabidops... [more]
WRK23_ARATH6.623e-1638.03Probable WRKY transcription factor 23 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CA03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262980 ID=DY262980; Name=DY262980; organism=Citrus clementina; type=EST; length=1175bp
AAAATTTAAGTAATACAAGTCTTTTGAGAAAATTTAAGTAATACAAGTCT
TTTGAGTAAATTTGTTCTTCTTGTTGGTCGTTAGCTATGGATTCTTTTTC
ATGGGTTGATACTTCATTGGATCTCAACTCCAACCCTCTCCGATTGAATG
ATGAAGTTCTGGCGCCGGCGAAGAAAGAATTGCAAGGCGATTTTTCTGGT
TTTGGGAACAAGGATTCTGTGAAACAAGAGACCGGAGCTTTAGTGGCGGA
ATTGAACCGCGTGAGTGCAGAAAATAAGAAGCTAACAGAAACGTTAACAG
CGTTGTGTGAGAGTTACAATGCTTTGAGAAACCAATTGATGGATTATATG
AGCAAGAATCCTGAGATTAGTAAGGAGGTTTTTATTAGTTCATCGAAGAA
ACGAAAATCCGAAAGCAGCAACAACGACAACAATGTTGCGCTAACAATGG
GAAATTCTGAAAGCAGTTCTACTGATGAAGAATCTTGCAAGAAACCAAGG
GAAGAACACATCAAGGCAAAGATTTCGAGAGTTCATTATAGGACCGAGCC
ATCTGATACCACCAGCCTTGTTGTGAAAGATGGATATCAATGGAGGAAAT
ACGGACAAAAGGTCACTAGAGATAATCCTTCTCCTAGAGCTTACTTCAAA
TGCTCTTTCGCTCCAAGCTGCCCAGTTAAAAAGAAGGTACAAAGAAGTGT
TGAGGACCAATCTGTATTGGTAGCGACTTACGAGGGGGAGCACAACCATC
CACTTCCGTGTCAAATGGACGCAGCATCCGGTTCAACAAGCCGTTGTGTG
ACGGCCGGTTCGGTCCCCTGCTCGACCGGACAAACCATCACTCTTGATCT
CACAAGGTCTAATAATAAGTCCAGCAACGAAAGATAAAGCTTTGAAACAA
AAATTGACACCAGTCCAGAAGTGAGAAATTTTTTGGTGGAACAGATGGCT
TCTTCATTGAACAAAGATCCTAAATTTTACAACGGCGCTGGCTGCCGGAA
TTTTCTGGGAAAATATTTCAACATAATCTAAGAAGAAAAATGGTGACTTT
CATAAAAAAATTGCTGAATGGTTTCGGTTGTTCCTTTCTTTTTTCCTTTT
TTTCATTTAAGAAATTTAGGCGGGCTGGGGAAATTTAAGGAGGTCTTTTT
GTAAAAAACGCCCTTTTGAAAAGGG
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