DY262980

Overview
NameDY262980
Unique NameDY262980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1175
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 6.623e-16
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 3
Query:  567 LVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTSRCVTAGSVP 818
            +V  D + WRKYGQK  + +P PR Y++CS +  C  +K+V+RS  D ++LV TY  EHNHP P Q +A +GST    ++ S P
Sbjct:  214 VVPSDLWAWRKYGQKPIKGSPFPRGYYRCSSSKGCSARKQVERSRTDPNMLVITYTSEHNHPWPIQRNALAGSTRSSTSSSSNP 297          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 8.650e-16
Identity = 40/90 (44.44%), Postives = 62/90 (68.89%), Query Frame = 3
Query:  489 KKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLP 758
            K  ++   KA+ +R  + T+ SD  +L   DGY+WRKYGQK  +++P PR+Y++C+    C VKK+V+RS +D S+++ TYEG+H HP P
Sbjct:  195 KAKKKNQKKAREARFAFLTK-SDIDNL--DDGYRWRKYGQKAVKNSPYPRSYYRCT-TVGCGVKKRVERSSDDPSIVMTTYEGQHTHPFP 280          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK39_ARATH (Probable WRKY transcription factor 39 OS=Arabidopsis thaliana GN=WRKY39 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.130e-15
Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  450 GNSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNH 749
            G+ +  S  +  C K R+  +K  I       + +D    +  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R +++ S+L+ TYEGEHNH
Sbjct:  224 GSLKCGSRSKCHCSKKRKLRVKRSIKVPAISNKIAD----IPPDEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCIDETSMLIVTYEGEHNH 319          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK68_ARATH (Probable WRKY transcription factor 68 OS=Arabidopsis thaliana GN=WRKY68 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.475e-15
Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = 3
Query:  450 GNSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLV------VKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGST 788
            G+ E     EE   K ++     K+SR   + +    + +       + DGY+WRKYGQK  +D+P PR Y++C+    C VKK+V+RS  D S ++ TYEG+H HP P  +    GS+
Sbjct:   70 GDDEEEEDGEEQQHKTKKRFKFTKMSRKQTKKKVPKVSFITRSEVLHLDDGYKWRKYGQKPVKDSPFPRNYYRCT-TTWCDVKKRVERSFSDPSSVITTYEGQHTHPRPLLIMPKEGSS 187          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRKY7_ARATH (Probable WRKY transcription factor 7 OS=Arabidopsis thaliana GN=WRKY7 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.927e-15
Identity = 39/98 (39.80%), Postives = 57/98 (58.16%), Query Frame = 3
Query:  462 SSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPL 755
            SS +    C K R+  +K  I      ++ +D  S    D + WRKYGQK  + +P PR Y+KCS    CP +K V+R+++D  +L+ TYEG+HNH L
Sbjct:  247 SSPSSRCHCSKKRKSRVKRVIRVPAVSSKMADIPS----DEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDAMMLIVTYEGDHNHAL 340          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK17_ARATH (Probable WRKY transcription factor 17 OS=Arabidopsis thaliana GN=WRKY17 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.927e-15
Identity = 41/117 (35.04%), Postives = 61/117 (52.14%), Query Frame = 3
Query:  450 GNSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTSRCV 800
            G    S   +  CKK R+  +K  +       + +D    +  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R+++D ++L+ TYEGEH H      +  + S S  V
Sbjct:  205 GKISGSGNGKCHCKKSRKNRMKRTVRVPAVSAKIAD----IPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDSTMLIVTYEGEHRHHQSTMQEHVTPSVSGLV 317          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK59_ARATH (Probable WRKY transcription factor 59 OS=Arabidopsis thaliana GN=WRKY59 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 2.517e-15
Identity = 41/95 (43.16%), Postives = 59/95 (62.11%), Query Frame = 3
Query:  474 DEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLP 758
            D++  KK R+ H +  I  V ++T+ S    + + DGY+WRKYG+K    +P PR Y KCS +P C VKKK++R   +   ++ TYEG HNHP P
Sbjct:   77 DKDEIKK-RKRHKEDPIIHV-FKTKSSIDEKVALDDGYKWRKYGKKPITGSPFPRHYHKCS-SPDCNVKKKIERDTNNPDYILTTYEGRHNHPSP 168          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK11_ARATH (Probable WRKY transcription factor 11 OS=Arabidopsis thaliana GN=WRKY11 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.287e-15
Identity = 40/112 (35.71%), Postives = 60/112 (53.57%), Query Frame = 3
Query:  450 GNSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGS 785
            G    S+  +  CKK R+  +K  +       + +D    +  D Y WRKYGQK  + +P PR Y+KCS    CP +K V+R+++D ++L+ TYEGEH H      +  S S
Sbjct:  208 GKVSGSAYGKCHCKKSRKNRMKRTVRVPAISAKIAD----IPPDEYSWRKYGQKPIKGSPHPRGYYKCSTFRGCPARKHVERALDDPAMLIVTYEGEHRHNQSAMQENISSS 315          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK10_ARATH (Probable WRKY transcription factor 10 OS=Arabidopsis thaliana GN=WRKY10 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.287e-15
Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 3
Query:  459 ESSSTDEESC-----KKPREEHIKAKISRVHYRTEPSDTTSLVVK---------DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTSRCVTA 806
            E    DE++      + P  +  + ++S +   T  S T  ++++         DGY+WRKYGQKV + NP+PR+YFKC+    C VKK V+R  ++  ++V TY+G HNHP P    + S S +R   A
Sbjct:  254 EEEEKDEDNVALDDPQPPPPKRRRYEVSNMIGATRTSKTQRIILQMESDEDNPNDGYRWRKYGQKVVKGNPNPRSYFKCTNI-ECRVKKHVERGADNIKLVVTTYDGIHNHPSPPARRSNSSSRNRSAGA 382          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK25_ARATH (Probable WRKY transcription factor 25 OS=Arabidopsis thaliana GN=WRKY25 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 5.607e-15
Identity = 34/63 (53.97%), Postives = 48/63 (76.19%), Query Frame = 3
Query:  570 VVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLP 758
            V+ DG++WRKYGQKV + N +PR+Y+KC+F   C VKK+V+RS  D+  ++ TYEG HNH +P
Sbjct:  326 VLIDGFRWRKYGQKVVKGNTNPRSYYKCTF-QGCGVKKQVERSAADERAVLTTYEGRHNHDIP 387          
The following BLAST results are available for this feature:
BLAST of DY262980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
WRK14_ARATH6.623e-1645.24Probable WRKY transcription factor 14 OS=Arabidops... [more]
WRK48_ARATH8.650e-1644.44Probable WRKY transcription factor 48 OS=Arabidops... [more]
WRK39_ARATH1.130e-1539.00Probable WRKY transcription factor 39 OS=Arabidops... [more]
WRK68_ARATH1.475e-1536.13Probable WRKY transcription factor 68 OS=Arabidops... [more]
WRKY7_ARATH1.927e-1539.80Probable WRKY transcription factor 7 OS=Arabidopsi... [more]
WRK17_ARATH1.927e-1535.04Probable WRKY transcription factor 17 OS=Arabidops... [more]
WRK59_ARATH2.517e-1543.16Probable WRKY transcription factor 59 OS=Arabidops... [more]
WRK11_ARATH3.287e-1535.71Probable WRKY transcription factor 11 OS=Arabidops... [more]
WRK10_ARATH3.287e-1535.38Probable WRKY transcription factor 10 OS=Arabidops... [more]
WRK25_ARATH5.607e-1553.97Probable WRKY transcription factor 25 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CA03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262980 ID=DY262980; Name=DY262980; organism=Citrus clementina; type=EST; length=1175bp
AAAATTTAAGTAATACAAGTCTTTTGAGAAAATTTAAGTAATACAAGTCT
TTTGAGTAAATTTGTTCTTCTTGTTGGTCGTTAGCTATGGATTCTTTTTC
ATGGGTTGATACTTCATTGGATCTCAACTCCAACCCTCTCCGATTGAATG
ATGAAGTTCTGGCGCCGGCGAAGAAAGAATTGCAAGGCGATTTTTCTGGT
TTTGGGAACAAGGATTCTGTGAAACAAGAGACCGGAGCTTTAGTGGCGGA
ATTGAACCGCGTGAGTGCAGAAAATAAGAAGCTAACAGAAACGTTAACAG
CGTTGTGTGAGAGTTACAATGCTTTGAGAAACCAATTGATGGATTATATG
AGCAAGAATCCTGAGATTAGTAAGGAGGTTTTTATTAGTTCATCGAAGAA
ACGAAAATCCGAAAGCAGCAACAACGACAACAATGTTGCGCTAACAATGG
GAAATTCTGAAAGCAGTTCTACTGATGAAGAATCTTGCAAGAAACCAAGG
GAAGAACACATCAAGGCAAAGATTTCGAGAGTTCATTATAGGACCGAGCC
ATCTGATACCACCAGCCTTGTTGTGAAAGATGGATATCAATGGAGGAAAT
ACGGACAAAAGGTCACTAGAGATAATCCTTCTCCTAGAGCTTACTTCAAA
TGCTCTTTCGCTCCAAGCTGCCCAGTTAAAAAGAAGGTACAAAGAAGTGT
TGAGGACCAATCTGTATTGGTAGCGACTTACGAGGGGGAGCACAACCATC
CACTTCCGTGTCAAATGGACGCAGCATCCGGTTCAACAAGCCGTTGTGTG
ACGGCCGGTTCGGTCCCCTGCTCGACCGGACAAACCATCACTCTTGATCT
CACAAGGTCTAATAATAAGTCCAGCAACGAAAGATAAAGCTTTGAAACAA
AAATTGACACCAGTCCAGAAGTGAGAAATTTTTTGGTGGAACAGATGGCT
TCTTCATTGAACAAAGATCCTAAATTTTACAACGGCGCTGGCTGCCGGAA
TTTTCTGGGAAAATATTTCAACATAATCTAAGAAGAAAAATGGTGACTTT
CATAAAAAAATTGCTGAATGGTTTCGGTTGTTCCTTTCTTTTTTCCTTTT
TTTCATTTAAGAAATTTAGGCGGGCTGGGGAAATTTAAGGAGGTCTTTTT
GTAAAAAACGCCCTTTTGAAAAGGG
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