DY262980

Overview
NameDY262980
Unique NameDY262980
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1175
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRKY1_MAIZE (Protein WRKY1 OS=Zea mays PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 7.323e-15
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 3
Query:  486 CKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNH 749
            C K R+  I+  I       + +D    +  D + WRKYGQK  + +P PR Y+KCS    CP +K V+R V+D S+L+ TYEG+HNH
Sbjct:  306 CSKKRKLRIRRSIKVPAISNKVAD----IPADEFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERCVDDPSMLIVTYEGDHNH 389          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK57_ARATH (Probable WRKY transcription factor 57 OS=Arabidopsis thaliana GN=WRKY57 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.783e-14
Identity = 38/99 (38.38%), Postives = 66/99 (66.67%), Query Frame = 3
Query:  453 NSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNH 749
            ++E +   E   K+ ++   + +  R  + T+ SD  +L  +DGY+WRKYGQK  +++P PR+Y++C+ +  C VKK+V+RS +D S+++ TYEG+H H
Sbjct:  109 SAEKTPPPETPVKEKKKAQKRIRQPRFAFMTK-SDVDNL--EDGYRWRKYGQKAVKNSPFPRSYYRCTNS-RCTVKKRVERSSDDPSIVITTYEGQHCH 203          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK50_ARATH (Probable WRKY transcription factor 50 OS=Arabidopsis thaliana GN=WRKY50 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.634e-14
Identity = 32/60 (53.33%), Postives = 46/60 (76.67%), Query Frame = 3
Query:  570 VVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNH 749
            V+ DG++WRKYG+K+ +++P PR Y+KCS    CPVKK+V+R  +D S ++ TYEG HNH
Sbjct:  111 VLDDGFKWRKYGKKMVKNSPHPRNYYKCS-VDGCPVKKRVERDRDDPSFVITTYEGSHNH 169          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK45_ARATH (Probable WRKY transcription factor 45 OS=Arabidopsis thaliana GN=WRKY45 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.634e-14
Identity = 42/99 (42.42%), Postives = 58/99 (58.59%), Query Frame = 3
Query:  453 NSESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNH 749
            NS   +T  E  +KPR +  K K     Y  +       ++ DGY+WRKYGQK  ++NP PR+Y+KC+    C VKK+VQR   D+ V+V TY+G H H
Sbjct:   28 NSAQPTTSSE--EKPRSKK-KKKEREARYAFQTRSQVD-ILDDGYRWRKYGQKAVKNNPFPRSYYKCT-EEGCRVKKQVQRQWGDEGVVVTTYQGVHTH 121          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.746e-14
Identity = 36/107 (33.64%), Postives = 57/107 (53.27%), Query Frame = 3
Query:  462 SSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASG 782
            SS + + S +   +  +   +  +       DTT     D + WRKYGQK  + +P PR Y++CS    CP +K+V+RS +D ++++ TY  EHNHP P      +G
Sbjct:   38 SSHSPKRSRRSVEKRVVNVPMKEMEGSRHKGDTTP--PSDSWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERSRDDPTMILITYTSEHNHPWPLTSSTRNG 142          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK32_ARATH (Probable WRKY transcription factor 32 OS=Arabidopsis thaliana GN=WRKY32 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.746e-14
Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 3
Query:  579 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGSTSRCVTAGSVPCS 824
            DGY+WRKYGQK+ + NP PR Y++C+ A  CPV+K ++ +VE+   ++ TY+G HNH +P       G  S  + A + P S
Sbjct:  332 DGYRWRKYGQKMVKGNPHPRNYYRCTSA-GCPVRKHIETAVENTKAVIITYKGVHNHDMPVP-KKRHGPPSSMLVAAAAPTS 411          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 1.057e-13
Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 3
Query:  543 TEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLP-CQMDAASGST 788
            T   D +S+   DGY WRKYGQK  + +  PR+Y+KC+  P CPVKKKV+RSVE Q V    Y+GEHNH  P C +   + S+
Sbjct:  157 TSTGDRSSV---DGYNWRKYGQKQVKGSECPRSYYKCTH-PKCPVKKKVERSVEGQ-VSEIVYQGEHNHSKPSCPLPRRASSS 234          

HSP 2 Score: 73.559 bits (179), Expect = 2.604e-12
Identity = 36/99 (36.36%), Postives = 59/99 (59.60%), Query Frame = 3
Query:  459 ESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPL 755
            +    D+ S  K R+   ++  + V   +  SD+    ++DG++WRKYGQKV   N  PR+Y++C+ A +C  +K V+R+ +D    + TYEG+HNH L
Sbjct:  314 DEGELDDPSRSKRRKNEKQSSEAGVSQGSVESDS----LEDGFRWRKYGQKVVGGNAYPRSYYRCTSA-NCRARKHVERASDDPRAFITTYEGKHNHHL 407          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK22_ARATH (WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.381e-13
Identity = 35/111 (31.53%), Postives = 60/111 (54.05%), Query Frame = 3
Query:  456 SESSSTDEESCKKPREEHIKAKISRVHYRTEPSDTTSLVVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGST 788
            S S+S+   + K       ++K  ++ ++         +  D + WRKYGQK  + +P PR Y++CS +  C  +K+V+R+  D  + + TY  EHNHP P   ++ +GST
Sbjct:   88 SLSASSGSVTSKPSGSNTSRSKRRKIQHKKVCHVAAEALNSDVWAWRKYGQKPIKGSPYPRGYYRCSTSKGCLARKQVERNRSDPKMFIVTYTAEHNHPAPTHRNSLAGST 198          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK34_ARATH (Probable WRKY transcription factor 34 OS=Arabidopsis thaliana GN=WRKY34 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.076e-13
Identity = 36/87 (41.38%), Postives = 56/87 (64.37%), Query Frame = 3
Query:  570 VVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAAS-GSTSRCVTAGSVPCST 827
            ++ DGY+WRKYGQKV + NP+PR+Y+KC+ A  C V K V+R+ +D   ++ TY G+H H +P   +++  G+ S     GS+   T
Sbjct:  370 ILDDGYRWRKYGQKVVKGNPNPRSYYKCT-ANGCTVTKHVERASDDFKSVLTTYIGKHTHVVPAARNSSHVGAGSSGTLQGSLATQT 455          
BLAST of DY262980 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.076e-13
Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 3
Query:  579 DGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSVLVATYEGEHNHPLPCQMDAASGST-SRCVTAGSVPCSTGQTITLD 848
            D + WRKYGQK  + +P PR+Y++C+ +  C  +K+V+RS  D +V V TY  EHNHP P   +  +GST S       V  S   T++ D
Sbjct: 1181 DLWVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNHPFPTLRNTLAGSTRSSSSKCSDVTTSASSTVSQD 1271          
The following BLAST results are available for this feature:
BLAST of DY262980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
WRKY1_MAIZE7.323e-1542.05Protein WRKY1 OS=Zea mays PE=1 SV=1[more]
WRK57_ARATH2.783e-1438.38Probable WRKY transcription factor 57 OS=Arabidops... [more]
WRK50_ARATH3.634e-1453.33Probable WRKY transcription factor 50 OS=Arabidops... [more]
WRK45_ARATH3.634e-1442.42Probable WRKY transcription factor 45 OS=Arabidops... [more]
WRK65_ARATH4.746e-1433.64Probable WRKY transcription factor 65 OS=Arabidops... [more]
WRK32_ARATH4.746e-1442.68Probable WRKY transcription factor 32 OS=Arabidops... [more]
WRK44_ARATH1.057e-1349.40WRKY transcription factor 44 OS=Arabidopsis thalia... [more]
WRK22_ARATH1.381e-1331.53WRKY transcription factor 22 OS=Arabidopsis thalia... [more]
WRK34_ARATH3.076e-1341.38Probable WRKY transcription factor 34 OS=Arabidops... [more]
WRK16_ARATH3.076e-1340.66Probable WRKY transcription factor 16 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CA03RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262980 ID=DY262980; Name=DY262980; organism=Citrus clementina; type=EST; length=1175bp
AAAATTTAAGTAATACAAGTCTTTTGAGAAAATTTAAGTAATACAAGTCT
TTTGAGTAAATTTGTTCTTCTTGTTGGTCGTTAGCTATGGATTCTTTTTC
ATGGGTTGATACTTCATTGGATCTCAACTCCAACCCTCTCCGATTGAATG
ATGAAGTTCTGGCGCCGGCGAAGAAAGAATTGCAAGGCGATTTTTCTGGT
TTTGGGAACAAGGATTCTGTGAAACAAGAGACCGGAGCTTTAGTGGCGGA
ATTGAACCGCGTGAGTGCAGAAAATAAGAAGCTAACAGAAACGTTAACAG
CGTTGTGTGAGAGTTACAATGCTTTGAGAAACCAATTGATGGATTATATG
AGCAAGAATCCTGAGATTAGTAAGGAGGTTTTTATTAGTTCATCGAAGAA
ACGAAAATCCGAAAGCAGCAACAACGACAACAATGTTGCGCTAACAATGG
GAAATTCTGAAAGCAGTTCTACTGATGAAGAATCTTGCAAGAAACCAAGG
GAAGAACACATCAAGGCAAAGATTTCGAGAGTTCATTATAGGACCGAGCC
ATCTGATACCACCAGCCTTGTTGTGAAAGATGGATATCAATGGAGGAAAT
ACGGACAAAAGGTCACTAGAGATAATCCTTCTCCTAGAGCTTACTTCAAA
TGCTCTTTCGCTCCAAGCTGCCCAGTTAAAAAGAAGGTACAAAGAAGTGT
TGAGGACCAATCTGTATTGGTAGCGACTTACGAGGGGGAGCACAACCATC
CACTTCCGTGTCAAATGGACGCAGCATCCGGTTCAACAAGCCGTTGTGTG
ACGGCCGGTTCGGTCCCCTGCTCGACCGGACAAACCATCACTCTTGATCT
CACAAGGTCTAATAATAAGTCCAGCAACGAAAGATAAAGCTTTGAAACAA
AAATTGACACCAGTCCAGAAGTGAGAAATTTTTTGGTGGAACAGATGGCT
TCTTCATTGAACAAAGATCCTAAATTTTACAACGGCGCTGGCTGCCGGAA
TTTTCTGGGAAAATATTTCAACATAATCTAAGAAGAAAAATGGTGACTTT
CATAAAAAAATTGCTGAATGGTTTCGGTTGTTCCTTTCTTTTTTCCTTTT
TTTCATTTAAGAAATTTAGGCGGGCTGGGGAAATTTAAGGAGGTCTTTTT
GTAAAAAACGCCCTTTTGAAAAGGG
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