DY263012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: FNTB_YEAST (Protein farnesyltransferase subunit beta OS=Saccharomyces cerevisiae GN=RAM1 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 4.545e-16 Identity = 48/176 (27.27%), Postives = 85/176 (48.30%), Query Frame = 2 Query: 383 YWGLTTLDILGK--LDAVDEEDVISWILKCQDESGGFAGNIGHDPHVLYTLSAVQVLALFDKLD----ILDADKVSNYVAGLQNGDGSFSGDIW-GEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFG-CTPGGESHSGQIFCCVGALAIAXALHHVD-KDLLGW 883 YW +L ++ + L + ++ + G F G G H+ T +A+ L+L D +D +D + ++ L+ +G F + GEVDTR Y A+ ++L L + + + Y+ +C+N +GGFG C E+H G FC +LAI ++ ++ + LL W Sbjct: 111 YWIANSLKVMDRDWLSDDTKRKIVDKLFTISPSGGPFGGGPGQLSHLASTYAAINALSLCDNIDGCWDRIDRKGIYQWLISLKEPNGGFKTCLEVGEVDTRGIYCALSIATLLNILTEELTEGVLNYLKNCQNYEGGFGSCPHVDEAHGGYTFCATASLAILRSMDQINVEKLLEW 286 HSP 2 Score: 31.9574 bits (71), Expect = 4.545e-16 Identity = 20/58 (34.48%), Postives = 29/58 (50.00%), Query Frame = 3 Query: 876 LAGWVCERQVKSG-GLYGRPEKLPDVCYSWWVLSSLVMIDKVHW---INKGQLVKFLL 1037 L W RQ++ G GR KL D CYS+WV S +++ + NK L ++L Sbjct: 283 LLEWSSARQLQEERGFCGRSNKLVDGCYSFWVGGSAAILEAFGYGQCFNKHALRDYIL 340
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB1_BOVIN (Geranylgeranyl transferase type-1 subunit beta OS=Bos taurus GN=PGGT1B PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.561e-16 Identity = 63/219 (28.77%), Postives = 99/219 (45.21%), Query Frame = 2 Query: 293 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWI-----LKCQDESG----GFAGN----IGHDP-------------HVLYTLSAVQVLALF-DKLDILDADKVSNYVAGLQNGDGSFSGDIWG-EVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHV 862 D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI L +D S GF G+ I +P H+ T + + L + D L ++ + + LQ DGSF G E D RF Y A C +L +++ KA+ YI + D G G ESH G FC + +L + L V Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKNPGTAHPYDSGHIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAINYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEV 239 HSP 2 Score: 34.2686 bits (77), Expect = 4.561e-16 Identity = 16/42 (38.10%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 885 WVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWIN 1010 W RQ G +GRP K D CYS+WV ++L ++ + N Sbjct: 251 WCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTN 290
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB1_HUMAN (Geranylgeranyl transferase type-1 subunit beta OS=Homo sapiens GN=PGGT1B PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.928e-16 Identity = 63/219 (28.77%), Postives = 99/219 (45.21%), Query Frame = 2 Query: 293 DKHVKYIIS-VEKKKDSFESVVMEHLRLNGAYWGLTTLDILGKLDAVDEEDVISWI-----LKCQDESG----GFAGN----IGHDP-------------HVLYTLSAVQVLALF-DKLDILDADKVSNYVAGLQNGDGSFSGDIWG-EVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXALHHV 862 D+HV++ ++ + + S +E RL A++ L+ LD+L LD V+++D+I WI L +D S GF G+ I +P H+ T + + L + D L ++ + + LQ DGSF G E D RF Y A C +L +++ KA+ YI + D G G ESH G FC + +L + L V Sbjct: 23 DRHVRFFQRCLQVLPERYSS--LETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLPTEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSGHIAMTYTGLSCLVILGDDLSRVNKEACLAGLRALQLEDGSFCAVPEGSENDMRFVYCASCICYMLNNWSGMDMKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEV 239 HSP 2 Score: 34.2686 bits (77), Expect = 5.928e-16 Identity = 16/42 (38.10%), Postives = 23/42 (54.76%), Query Frame = 3 Query: 885 WVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWIN 1010 W RQ G +GRP K D CYS+WV ++L ++ + N Sbjct: 251 WCIMRQ--QNGYHGRPNKPVDTCYSFWVGATLKLLKIFQYTN 290
BLAST of DY263012 vs. ExPASy Swiss-Prot
Match: PGTB1_DICDI (Geranylgeranyl transferase type-1 subunit beta OS=Dictyostelium discoideum GN=pggt1b PE=2 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 1.984e-12 Identity = 54/209 (25.84%), Postives = 91/209 (43.54%), Query Frame = 2 Query: 341 FESVVMEHLRLNGAYWGLTTLDILGKLDAVDEE--DVISW-----ILKCQD------ESGGFAGN--IGHD-------------------PHVLYTLSAVQVLALFDKLDILDADK---VSNYVAGLQNGDGSFSGDI-WGEVDTRFSYIAICCLSILQRLDKINVDKAVEYIVSCKNLDGGFGCTPGGESHSGQIFCCVGALAIAXAL 853 + S + HL L ++ ++ LD+L K D +++E D+I+W IL +D E+ GF G +G + P T A+ +L + D +K + + + DG+ SG G+ D R + A IL IN + A++YI SC + + FG TP E+H G +C + +L++ L Sbjct: 25 YTSGLPNHLSL--IFFVVSGLDLLNKTDILEKEKQDIINWVYSRQILPSKDNPEINLENCGFRGYNFLGQEFCCDKSVHTSENGPLEYDLPSTPNTYCALLILRILGD-DFSGVNKKAIIDSLRKRQRESDGAISGSPNVGDYDLRHLFSACAISFILDDWSAINKESAIDYIKSCLSYEFAFGQTPQQEAHGGPTYCAIASLSLLGRL 230 HSP 2 Score: 41.5874 bits (96), Expect = 1.984e-12 Identity = 19/53 (35.85%), Postives = 32/53 (60.38%), Query Frame = 3 Query: 876 LAGWVCERQVKSGGLYGRPEKLPDVCYSWWVLSSLVMIDKVHWINKGQLVKFL 1034 L W+ ++Q+ G GR K PD CY++W+ +SL+MID+ I+ + F+ Sbjct: 240 LTFWLVKKQIT--GFCGRTNKDPDTCYAFWIGASLMMIDRYDLIDFASINAFI 290 The following BLAST results are available for this feature:
BLAST of DY263012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 24
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263012 ID=DY263012; Name=DY263012; organism=Citrus clementina; type=EST; length=1205bpback to top |