DY263046 | Citrus Genome Database

Overview


Name	DY263046
Unique Name	DY263046
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1250

Libraries


Library Name	Type
CitNFL	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

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BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: RBBP7_DANRE (Histone-binding protein RBBP7 OS=Danio rerio GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 7.536e-92
Identity = 148/291 (50.86%), Postives = 194/291 (66.67%), Query Frame = 2

Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENP---------VIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVS-ALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            + EE+ +WKKNTPFLYDL+++H LEWPSLTV W+P   +P   D  + VH+ VLGTHTS++  N L+IA A +P  D++ +    +            V  K+EI  KI  +GEVNRAR MPQ P ++ TKT + +V  FD  K   K     DC PDLRL+GH KEGYGLSW+P   G L+S S D+ ICLWD+S A  + K++DA  ++  H +VVEDVSWHL +E+LFGS  DD +LMIWD R+N T +    V AH  EVN LSFNPY+E++LAT S+D TVAL+D+
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKD--YVVHRLVLGTHTSDE-QNHLVIASAQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303

HSP 2 Score: 71.2478 bits (173), Expect = 7.536e-92
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 3

Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGPS*TPFPPGRSQGPKY*NFP*NKNDP 1130
            R + + LH   SH +E+F+V+W P++ET+LASS  +RRL VW+L +IG++Q   +AE GP    F  G     K  +F  N N+P
Sbjct:  304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG-GHTAKISDFSWNPNEP 387

HSP 3 Score: 72.0182 bits (175), Expect = 8.211e-12
Identity = 40/148 (27.03%), Postives = 69/148 (46.62%), Query Frame = 2

Query:  482 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK--------------AHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAED 883
            P   +  H  E   LS++P+ E  L +GS D  + LWD+  L        +H +E+H+  +  V W   NE +  S+G D +L +WDL     +Q  +               H  +++  S+NP   WV+ + S D  + ++ +AE+
Sbjct:  265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 407

[Close]

BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: RBP4A_XENLA (Histone-binding protein RBBP4-A OS=Xenopus laevis GN=rbbp4-A PE=1 SV=3)

HSP 1 Score: 287.73 bits (735), Expect = 2.183e-91
Identity = 147/290 (50.69%), Postives = 196/290 (67.59%), Query Frame = 2

Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENP--------VIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            + EE+ +WKKNTPFLYDL+++H LEWPSLT  W+    +P   D  F++H+ VLGTHTS++  N L+IA   LP  D++ +    +           V  K+EI  KI  DGEVNRAR MPQ P ++ TKT + +V VFD  K   K     +C+P+LRL+GH KEGYGLSW+P   G L+S S D+ ICLWD+SA+ ++ KV+DA  ++  H +VVEDVSWHL +E+LFGS  DD +LMIWD R+N T +    V AH  EVN LSFNPY+E++LAT S+D TVAL+D+
Sbjct:   17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKD--FSIHRLVLGTHTSDE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKITHDGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303

HSP 2 Score: 71.2478 bits (173), Expect = 2.183e-91
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 3

Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGPS*TPFPPGRSQGPKY*NFP*NKNDP 1130
            R + + LH   SH +E+F+V+W P++ET+LASS  +RRL VW+L +IG++Q   +AE GP    F  G     K  +F  N N+P
Sbjct:  304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHG-GHTAKISDFSWNPNEP 387

HSP 3 Score: 71.2478 bits (173), Expect = 1.401e-11
Identity = 40/148 (27.03%), Postives = 69/148 (46.62%), Query Frame = 2

Query:  482 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK--------------AHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAED 883
            P   +  H  E   LS++P+ E  L +GS D  + LWD+  L        +H +E+H+  +  V W   NE +  S+G D +L +WDL     +Q  +               H  +++  S+NP   WV+ + S D  + ++ +AE+
Sbjct:  265 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 407

[Close]

BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: RBBP4_DANRE (Histone-binding protein RBBP4 OS=Danio rerio GN=rbbp4 PE=2 SV=3)

HSP 1 Score: 287.345 bits (734), Expect = 2.847e-91
Identity = 146/290 (50.34%), Postives = 194/290 (66.90%), Query Frame = 2

Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENP--------VIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            + EE+ +WKKNTPFLYDL+++H LEWPSLT  W+P   +P   D  F+VH+ VLGTHTS++  N L+IA   LP  D++ +    +           V  K+EI  KI  +GEVNRAR MPQ P ++ TKT + +V VFD  K   K     +C PDLRL+GH KEGYGLSW+P     L+S S D+ ICLWD+S + ++ K++DA  ++  H +VVEDVSWHL +E+LFGS  DD +LMIWD R+N T +    V AH  EVN LSFNPY+E++LAT S+D TVAL+D+
Sbjct:   17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD--FSVHRLVLGTHTSDE-QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLRSCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 303

HSP 2 Score: 71.2478 bits (173), Expect = 2.847e-91
Identity = 36/85 (42.35%), Postives = 53/85 (62.35%), Query Frame = 3

Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGPS*TPFPPGRSQGPKY*NFP*NKNDP 1130
            R + + LH   SH +E+F+V+W P++ET+LASS  +RRL VW+L +IG++Q   +AE GP    F  G     K  +F  N N+P
Sbjct:  304 RNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHG-GHTAKISDFSWNPNEP 387

HSP 3 Score: 71.2478 bits (173), Expect = 1.401e-11
Identity = 40/148 (27.03%), Postives = 69/148 (46.62%), Query Frame = 2

Query:  482 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK--------------AHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAED 883
            P   +  H  E   LS++P+ E  L +GS D  + LWD+  L        +H +E+H+  +  V W   NE +  S+G D +L +WDL     +Q  +               H  +++  S+NP   WV+ + S D  + ++ +AE+
Sbjct:  265 PSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAEN 407

[Close]

BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: RBBP7_XENTR (Histone-binding protein RBBP7 OS=Xenopus tropicalis GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.115e-90
Identity = 145/290 (50.00%), Postives = 194/290 (66.90%), Query Frame = 2

Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNENP--------VIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            + EE+ +WKKNTPFLYDL+++H LEWPSLTV W+P   +P   D  +A+H  VLGTHTS++  N L++A   +P  D++ +    +           V  K+E   KI  +GEVNRAR MPQ P ++ TKT S +V VFD  K   K     DC PDLRL+GH KEGYGLSW+    G+L+S S D+ +CLWD+SA  ++ KV+DA  ++  H +VVEDV+WHL +E+LFGS  DD +LMIWD R+N T +    V AH  EVN LSFNPY+E++LAT S+D TVAL+D+
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKD--YALHWLVLGTHTSDE-QNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302

HSP 2 Score: 70.4774 bits (171), Expect = 3.115e-90
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 3

Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGPS*TPFPPGRSQGPKY*NFP*NKNDP 1130
            R + + LH   SH +E+F+V W P++ET+LASS  +RRL VW+L +IG++Q   +AE GP    F  G     K  +F  N N+P
Sbjct:  303 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG-GHTAKISDFSWNPNEP 386

HSP 3 Score: 72.0182 bits (175), Expect = 8.211e-12
Identity = 40/148 (27.03%), Postives = 69/148 (46.62%), Query Frame = 2

Query:  482 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK--------------AHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAED 883
            P   +  H  E   LS++P+ E  L +GS D  + LWD+  L        +H +E+H+  +  V W   NE +  S+G D +L +WDL     +Q  +               H  +++  S+NP   WV+ + S D  + ++ +AE+
Sbjct:  264 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406

[Close]

BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: RBBP7_XENLA (Histone-binding protein RBBP7 OS=Xenopus laevis GN=rbbp7 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 9.021e-90
Identity = 145/290 (50.00%), Postives = 194/290 (66.90%), Query Frame = 2

Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNE--------NPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEK--QQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            + EE+ +WKKNTPFLYDL+++H LEWPSLTV W+P   +P   D  +A+H  VLGTHTS++  N L++A   +P  D++ +    +           V  K+E   KI  +GEVNRAR MPQ P ++ TKT S +V VFD  K   K     +C PDLRL+GH KEGYGLSW+    G+L+S S D+ +CLWD+SA  ++ KV+DA  V+  H +VVEDV+WHL +E+LFGS  DD +LMIWD R+N T +    V AH  EVN LSFNPY+E++LAT S+D TVAL+D+
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKD--YALHWLVLGTHTSDE-QNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYMPQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302

HSP 2 Score: 70.4774 bits (171), Expect = 9.021e-90
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 3

Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGPS*TPFPPGRSQGPKY*NFP*NKNDP 1130
            R + + LH   SH +E+F+V W P++ET+LASS  +RRL VW+L +IG++Q   +AE GP    F  G     K  +F  N N+P
Sbjct:  303 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG-GHTAKISDFSWNPNEP 386

HSP 3 Score: 72.0182 bits (175), Expect = 8.211e-12
Identity = 40/148 (27.03%), Postives = 69/148 (46.62%), Query Frame = 2

Query:  482 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK--------------AHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAED 883
            P   +  H  E   LS++P+ E  L +GS D  + LWD+  L        +H +E+H+  +  V W   NE +  S+G D +L +WDL     +Q  +               H  +++  S+NP   WV+ + S D  + ++ +AE+
Sbjct:  264 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406

[Close]

BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: RBBP7_CHICK (Histone-binding protein RBBP7 OS=Gallus gallus GN=RBBP7 PE=1 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 9.021e-90
Identity = 144/289 (49.83%), Postives = 194/289 (67.13%), Query Frame = 2

Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNVGGKNEN-------PVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQD--DCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            + EE+ +WKKNTPFLYDL+++H LEWPSLTV W+P   +P   D  +A+H  VLGTHTS++  N L++A   +P  D        +E         V  K+E   KI  +GEVNRAR MPQ P ++ TKT S +V VFD  K   K     +C+PDLRL+GH KEGYGLSW+   +G+L+S S D+ +CLWD+SA  ++ K++DA  ++  H +VVEDV+WHL +E+LFGS  DD +LMIWD R+N T +    V AH  EVN LSFNPY+E++LAT S+D TVAL+D+
Sbjct:   16 ISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKD--YALHWLVLGTHTSDE-QNHLVVARVQIPNDDQFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYMPQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 301

HSP 2 Score: 70.4774 bits (171), Expect = 9.021e-90
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 3

Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGPS*TPFPPGRSQGPKY*NFP*NKNDP 1130
            R + + LH   SH +E+F+V W P++ET+LASS  +RRL VW+L +IG++Q   +AE GP    F  G     K  +F  N N+P
Sbjct:  302 RNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG-GHTAKISDFSWNPNEP 385

HSP 3 Score: 72.0182 bits (175), Expect = 8.211e-12
Identity = 40/148 (27.03%), Postives = 69/148 (46.62%), Query Frame = 2

Query:  482 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK--------------AHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAED 883
            P   +  H  E   LS++P+ E  L +GS D  + LWD+  L        +H +E+H+  +  V W   NE +  S+G D +L +WDL     +Q  +               H  +++  S+NP   WV+ + S D  + ++ +AE+
Sbjct:  263 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 405

[Close]

BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: RBBD_DICDI (Probable histone-binding protein rbbD OS=Dictyostelium discoideum GN=rbbD PE=3 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.535e-89
Identity = 145/306 (47.39%), Postives = 201/306 (65.69%), Query Frame = 2

Query:   11 MAAEEQDASLDQVEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVP----SPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTK----------DSESNVGGKNENPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEKQQDD--CDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQ-DKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRT-NQTQQRVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            M  + +D     + EE+ +WK++TPFLYD++++H LEWPSLTV W+P     P +PYS      + K +LGTHTS++  N+LM+A   LP            D++  VGG     V  K+EI QKI  +GEVNRAR MPQ  +++ TKT S EVY+FD  K   +   D  C P+L+L GH KEGYG+SW+P KEG+L+S S D  IC+WD+SA ++ D  +DA+++Y  H S+VEDV+WH  ++  FGS GDD +LMIWD RT  +    V+AH  EVN LSFNP+ E+++AT S+D TVAL+D+
Sbjct:    1 MTTQMEDVEEKVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYS------IEKVILGTHTSDEEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGN--VSEKIEIIQKINHEGEVNRARVMPQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWDM 298

HSP 2 Score: 66.6254 bits (161), Expect = 1.535e-89
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 3

Query:  894 LHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGPS*TPFPPGRSQGPKY*NFP*NKNDP 1130
            LH L SHT+EVF+V++ P++ETVLAS   +RR+ VW+L RIG++Q   +A  GP    F  G     K  +F  N NDP
Sbjct:  305 LHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIGEEQNNEDAADGPPELLFIHG-GHTSKISDFSWNPNDP 382

[Close]

BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: RBBP7_RAT (Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.002e-89
Identity = 143/290 (49.31%), Postives = 197/290 (67.93%), Query Frame = 2

Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNV----GGKNE----NPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEK--QQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            + EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P   +P   D  +A+H  VLGTHTS++  N L++A   +P  D++ +       K E      V  K+E   KI  +GEVNRAR MPQ P+++ TKT S +V VFD  K   K     +C+PDLRL+GH KEGYGLSW+    G+L+S S D+ +CLWD++A  ++ K++DA  ++  H +VVEDV+WHL +E+LFGS  DD +LMIWD R+N T +    V AH  EVN LSFNPY+E++LAT S+D TVAL+D+
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302

HSP 2 Score: 70.8626 bits (172), Expect = 2.002e-89
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 3

Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGPS*TPFPPGRSQGPKY*NFP*NKNDP 1130
            R + + LH   SH +E+F+V W P++ET+LASS  +RRL VW+L +IG++Q   +AE GP    F  G     K  +F  N N+P
Sbjct:  303 RNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG-GHTAKISDFSWNPNEP 386

HSP 3 Score: 72.4034 bits (176), Expect = 6.287e-12
Identity = 40/148 (27.03%), Postives = 69/148 (46.62%), Query Frame = 2

Query:  482 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK--------------AHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAED 883
            P   +  H  E   LS++P+ E  L +GS D  + LWD+  L        +H +E+H+  +  V W   NE +  S+G D +L +WDL     +Q  +               H  +++  S+NP   WV+ + S D  + ++ +AE+
Sbjct:  264 PSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406

[Close]

BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: RBBP7_MOUSE (Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.002e-89
Identity = 143/290 (49.31%), Postives = 197/290 (67.93%), Query Frame = 2

Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNV----GGKNE----NPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEK--QQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            + EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P   +P   D  +A+H  VLGTHTS++  N L++A   +P  D++ +       K E      V  K+E   KI  +GEVNRAR MPQ P+++ TKT S +V VFD  K   K     +C+PDLRL+GH KEGYGLSW+    G+L+S S D+ +CLWD++A  ++ K++DA  ++  H +VVEDV+WHL +E+LFGS  DD +LMIWD R+N T +    V AH  EVN LSFNPY+E++LAT S+D TVAL+D+
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302

HSP 2 Score: 70.8626 bits (172), Expect = 2.002e-89
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 3

Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGPS*TPFPPGRSQGPKY*NFP*NKNDP 1130
            R + + LH   SH +E+F+V W P++ET+LASS  +RRL VW+L +IG++Q   +AE GP    F  G     K  +F  N N+P
Sbjct:  303 RNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG-GHTAKISDFSWNPNEP 386

HSP 3 Score: 72.4034 bits (176), Expect = 6.287e-12
Identity = 40/148 (27.03%), Postives = 69/148 (46.62%), Query Frame = 2

Query:  482 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK--------------AHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAED 883
            P   +  H  E   LS++P+ E  L +GS D  + LWD+  L        +H +E+H+  +  V W   NE +  S+G D +L +WDL     +Q  +               H  +++  S+NP   WV+ + S D  + ++ +AE+
Sbjct:  264 PSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406

[Close]

BLAST of DY263046 vs. ExPASy Swiss-Prot
Match: RBBP7_MACFA (Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 2.002e-89
Identity = 143/290 (49.31%), Postives = 197/290 (67.93%), Query Frame = 2

Query:   47 VEEEFTVWKKNTPFLYDLIVSHPLEWPSLTVHWVPSPPQPYSADPTFAVHKFVLGTHTSEDFPNFLMIADAVLPTKDSESNV----GGKNE----NPVIPKVEIAQKIRVDGEVNRARCMPQKPNLVGTKTSSCEVYVFDCAKQAEK--QQDDCDPDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQD-KVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQ---RVKAHEKEVNYLSFNPYNEWVLATASSDTTVALFDI 874
            + EE+ +WKKNTPFLYDL+++H L+WPSLTV W+P   +P   D  +A+H  VLGTHTS++  N L++A   +P  D++ +       K E      V  K+E   KI  +GEVNRAR MPQ P+++ TKT S +V VFD  K   K     +C+PDLRL+GH KEGYGLSW+    G+L+S S D+ +CLWD++A  ++ K++DA  ++  H +VVEDV+WHL +E+LFGS  DD +LMIWD R+N T +    V AH  EVN LSFNPY+E++LAT S+D TVAL+D+
Sbjct:   16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKD--YALHWLVLGTHTSDE-QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 302

HSP 2 Score: 70.8626 bits (172), Expect = 2.002e-89
Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 3

Query:  876 RKMTVPLHILSSHTEEVFRVEWDPYHETVLASSADERRLMVWELYRIGDKQLELNAEGGPS*TPFPPGRSQGPKY*NFP*NKNDP 1130
            R + + LH   SH +E+F+V W P++ET+LASS  +RRL VW+L +IG++Q   +AE GP    F  G     K  +F  N N+P
Sbjct:  303 RNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHG-GHTAKISDFSWNPNEP 386

HSP 3 Score: 72.4034 bits (176), Expect = 6.287e-12
Identity = 40/148 (27.03%), Postives = 69/148 (46.62%), Query Frame = 2

Query:  482 PDLRLKGHDKEGYGLSWSPFKEGYLVSGSHDNKICLWDVSALAQDKVIDAMHVYEAHESVVEDVSWHLKNENLFGSAGDDCQLMIWDLRTNQTQQRVK--------------AHEKEVNYLSFNPYNEWVLATASSDTTVALFDIAED 883
            P   +  H  E   LS++P+ E  L +GS D  + LWD+  L        +H +E+H+  +  V W   NE +  S+G D +L +WDL     +Q  +               H  +++  S+NP   WV+ + S D  + ++ +AE+
Sbjct:  264 PSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK-----LHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAEN 406

The following BLAST results are available for this feature:

BLAST of DY263046 vs. ExPASy Swiss-Prot

BLAST of DY263046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58


Match Name	E-value	Identity	Description
RBBP7_DANRE	7.536e-92	50.86	Histone-binding protein RBBP7 OS=Danio rerio GN=rb...	[more]
RBP4A_XENLA	2.183e-91	50.69	Histone-binding protein RBBP4-A OS=Xenopus laevis ...	[more]
RBBP4_DANRE	2.847e-91	50.34	Histone-binding protein RBBP4 OS=Danio rerio GN=rb...	[more]
RBBP7_XENTR	3.115e-90	50.00	Histone-binding protein RBBP7 OS=Xenopus tropicali...	[more]
RBBP7_XENLA	9.021e-90	50.00	Histone-binding protein RBBP7 OS=Xenopus laevis GN...	[more]
RBBP7_CHICK	9.021e-90	49.83	Histone-binding protein RBBP7 OS=Gallus gallus GN=...	[more]
RBBD_DICDI	1.535e-89	47.39	Probable histone-binding protein rbbD OS=Dictyoste...	[more]
RBBP7_RAT	2.002e-89	49.31	Histone-binding protein RBBP7 OS=Rattus norvegicus...	[more]
RBBP7_MOUSE	2.002e-89	49.31	Histone-binding protein RBBP7 OS=Mus musculus GN=R...	[more]
RBBP7_MACFA	2.002e-89	49.31	Histone-binding protein RBBP7 OS=Macaca fascicular...	[more]

Pages

Properties


Property Name	Value
Genbank description	IC0AAA10CF10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY263046 ID=DY263046; Name=DY263046; organism=Citrus clementina; type=EST; length=1250bp
CGGACGAACAATGGCAGCAGAGGAGCAAGACGCGAGCTTGGATCAAGTGG
AGGAGGAGTTCACGGTATGGAAGAAGAACACGCCGTTTTTGTACGATCTG
ATTGTCTCTCACCCGTTAGAGTGGCCCTCGCTTACCGTCCACTGGGTCCC
ATCGCCTCCGCAACCCTACTCAGCGGACCCCACTTTCGCGGTGCACAAGT
TCGTGCTCGGGACCCACACCTCCGAGGATTTTCCCAACTTTCTCATGATC
GCCGATGCCGTGCTGCCCACCAAAGACTCGGAGTCTAACGTCGGCGGCAA
AAATGAAAATCCTGTCATCCCCAAGGTGGAGATAGCGCAGAAGATACGTG
TTGATGGGGAAGTGAATAGAGCACGGTGTATGCCACAGAAACCCAATCTT
GTTGGTACAAAGACTAGCAGTTGTGAGGTGTATGTGTTTGACTGTGCCAA
ACAGGCAGAAAAGCAGCAAGATGATTGTGATCCTGATCTGAGGTTGAAGG
GTCATGATAAAGAGGGTTATGGATTGTCTTGGAGTCCCTTTAAGGAAGGT
TATCTTGTGAGTGGTTCCCATGACAATAAGATTTGCTTGTGGGATGTGTC
TGCGTTGGCTCAAGACAAAGTGATTGATGCAATGCATGTCTATGAGGCTC
ATGAAAGTGTGGTTGAAGATGTGTCGTGGCATTTGAAGAATGAGAATTTA
TTTGGGTCTGCAGGCGATGATTGCCAACTGATGATCTGGGACTTGCGCAC
TAATCAAACTCAACAGCGTGTAAAAGCTCATGAGAAAGAGGTTAACTATC
TATCTTTTAATCCATACAATGAATGGGTTCTGGCGACTGCATCTTCAGAC
ACTACTGTTGCTTTGTTTGATATTGCGGAAGATGACTGTGCCGTTACACA
TTTTAAGTAGTCACACAGAAGAAGTGTTCCGGGTTGAATGGGATCCCTAT
CACGAAACCGTGCTGGCTTCTTCAGCTGATGAACGAAGGCTCATGGTTTG
GGAACTTTACCGGATTGGGGACAAGCAGTTGGAATTAAATGCCGAAGGAG
GGCCTTCCTGAACCCCTTTTCCTCCAGGGAGGTCACAGGGCCCCAAATAT
TAAAATTTCCCTTGAAACAAAAATGACCCGGGGGGGTTCTTTTCAGGTGG
GGCCCAACAAAAAAAACGTGTTCTGGGGCTTGGGGCAAATGGACAAAAAA
AACTTTTATCCGGAAGAACCAAAAAAAAAATTTTTCTCTCCCCCCCCCCC